Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC092634.7-201ENST00000621022 103 ntBASIC0.7□□□□□ -2.3
PACSIN3Q9UKS6 AC103706.3-201ENST00000636297 85 ntBASIC0.7□□□□□ -2.3
PACSIN3Q9UKS6 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
PACSIN3Q9UKS6 MIR521-2-201ENST00000384818 87 ntBASIC0.69□□□□□ -2.3
PACSIN3Q9UKS6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.69□□□□□ -2.3
PACSIN3Q9UKS6 MIR548E-201ENST00000408287 88 ntBASIC0.69□□□□□ -2.3
PACSIN3Q9UKS6 AL157398.1-201ENST00000452981 186 ntBASIC0.69□□□□□ -2.3
PACSIN3Q9UKS6 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
PACSIN3Q9UKS6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.69□□□□□ -2.3
PACSIN3Q9UKS6 RNU6-1162P-201ENST00000384443 104 ntBASIC0.68□□□□□ -2.3
PACSIN3Q9UKS6 AC110620.1-201ENST00000416042 228 ntBASIC0.68□□□□□ -2.3
PACSIN3Q9UKS6 Y_RNA.633-201ENST00000459107 95 ntBASIC0.68□□□□□ -2.3
PACSIN3Q9UKS6 RNU6-1089P-201ENST00000516473 104 ntBASIC0.68□□□□□ -2.3
PACSIN3Q9UKS6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.68□□□□□ -2.3
PACSIN3Q9UKS6 SNORD118-201ENST00000363593 134 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 SNORA33.1-201ENST00000364957 130 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 MIR548C-201ENST00000384815 97 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 RNA5SP299-201ENST00000391203 116 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 RNU6-542P-201ENST00000516405 103 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 MIR548V-201ENST00000584165 80 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 uc_338.10-201ENST00000621872 182 ntBASIC0.67□□□□□ -2.3
PACSIN3Q9UKS6 Y_RNA.250-201ENST00000364542 110 ntBASIC0.66□□□□□ -2.3
PACSIN3Q9UKS6 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
PACSIN3Q9UKS6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
PACSIN3Q9UKS6 SNORA40.8-201ENST00000411034 126 ntBASIC0.66□□□□□ -2.3
PACSIN3Q9UKS6 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
PACSIN3Q9UKS6 SNORA63.6-201ENST00000364921 119 ntBASIC0.65□□□□□ -2.31
PACSIN3Q9UKS6 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
PACSIN3Q9UKS6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
PACSIN3Q9UKS6 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
PACSIN3Q9UKS6 MIR5706-201ENST00000579841 80 ntBASIC0.64□□□□□ -2.31
PACSIN3Q9UKS6 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
PACSIN3Q9UKS6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 Y_RNA.125-201ENST00000363371 111 ntBASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 RNA5SP192-201ENST00000364404 120 ntBASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 MIR630-201ENST00000384957 97 ntBASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 MIR518A1-201ENST00000385068 85 ntBASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 U2.7-201ENST00000619197 100 ntBASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 MIR6755-201ENST00000619993 66 ntBASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 AC090617.8-201ENST00000623339 167 ntBASIC0.63□□□□□ -2.31
PACSIN3Q9UKS6 RNA5SP215-201ENST00000363440 122 ntBASIC0.62□□□□□ -2.31
PACSIN3Q9UKS6 SNORA2A-201ENST00000383885 135 ntBASIC0.62□□□□□ -2.31
PACSIN3Q9UKS6 SNORA15B-2-201ENST00000384058 135 ntBASIC0.62□□□□□ -2.31
PACSIN3Q9UKS6 SNORA15B-1-201ENST00000384334 135 ntBASIC0.62□□□□□ -2.31
PACSIN3Q9UKS6 SCARNA21.1-201ENST00000515996 128 ntBASIC0.62□□□□□ -2.31
PACSIN3Q9UKS6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
PACSIN3Q9UKS6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
PACSIN3Q9UKS6 SNORA25.5-201ENST00000363782 126 ntBASIC0.61□□□□□ -2.31
PACSIN3Q9UKS6 MIR633-201ENST00000384821 98 ntBASIC0.61□□□□□ -2.31
PACSIN3Q9UKS6 MIR516B1-201ENST00000385211 90 ntBASIC0.61□□□□□ -2.31
PACSIN3Q9UKS6 SNORA75.1-201ENST00000391130 148 ntBASIC0.6□□□□□ -2.31
PACSIN3Q9UKS6 SNORD71-201ENST00000411292 86 ntBASIC0.6□□□□□ -2.31
PACSIN3Q9UKS6 RNU6-669P-201ENST00000365575 107 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 RNU6-499P-201ENST00000365615 107 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 MIR501-201ENST00000390204 84 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 RNU7-174P-201ENST00000516248 59 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 RNU7-188P-201ENST00000517063 64 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 CYP3A54P-201ENST00000566950 75 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 U6.96-201ENST00000636425 70 ntBASIC0.59□□□□□ -2.31
PACSIN3Q9UKS6 MIR20A-201ENST00000362279 71 ntBASIC0.58□□□□□ -2.32
PACSIN3Q9UKS6 AC244090.1-201ENST00000441884 93 ntBASIC0.58□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-175P-201ENST00000516896 107 ntBASIC0.58□□□□□ -2.32
PACSIN3Q9UKS6 MIR4677-201ENST00000584153 80 ntBASIC0.58□□□□□ -2.32
PACSIN3Q9UKS6 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
PACSIN3Q9UKS6 MIR6513-201ENST00000621188 64 ntBASIC0.58□□□□□ -2.32
PACSIN3Q9UKS6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.57□□□□□ -2.32
PACSIN3Q9UKS6 MIR517B-201ENST00000385102 67 ntBASIC0.57□□□□□ -2.32
PACSIN3Q9UKS6 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
PACSIN3Q9UKS6 MIR760-201ENST00000390220 80 ntBASIC0.57□□□□□ -2.32
PACSIN3Q9UKS6 MIR466-201ENST00000580653 84 ntBASIC0.57□□□□□ -2.32
PACSIN3Q9UKS6 U4.4-201ENST00000620626 117 ntBASIC0.57□□□□□ -2.32
PACSIN3Q9UKS6 MIR499B-201ENST00000636498 73 ntBASIC0.57□□□□□ -2.32
PACSIN3Q9UKS6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
PACSIN3Q9UKS6 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
PACSIN3Q9UKS6 SNORA49-201ENST00000386157 136 ntBASIC0.56□□□□□ -2.32
PACSIN3Q9UKS6 RNA5SP480-201ENST00000516840 109 ntBASIC0.56□□□□□ -2.32
PACSIN3Q9UKS6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-1079P-201ENST00000362861 110 ntBASIC0.55□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-92P-201ENST00000605893 104 ntBASIC0.55□□□□□ -2.32
PACSIN3Q9UKS6 SNORD44.1-201ENST00000363202 61 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-698P-201ENST00000363523 107 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 SNORD114-29-201ENST00000364819 70 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-34P-201ENST00000364874 107 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 MIR216A-201ENST00000385063 110 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-1246P-201ENST00000391064 107 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 RNU6-337P-201ENST00000391243 106 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 MTND4LP19-201ENST00000403051 166 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 MIR3925-201ENST00000584674 77 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 MIR548AD-201ENST00000584780 82 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 U7.6-201ENST00000610841 64 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 RN7SL660P-201ENST00000614852 299 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 AC084368.1-201ENST00000620935 65 ntBASIC0.54□□□□□ -2.32
PACSIN3Q9UKS6 Y_RNA.325-201ENST00000365171 122 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms