Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 Y_RNA.250-201ENST00000364542 110 ntBASIC1.22□□□□□ -2.21
ATG3Q9NT62 SNORA33.1-201ENST00000364957 130 ntBASIC1.22□□□□□ -2.21
ATG3Q9NT62 MIR4698-201ENST00000577795 80 ntBASIC1.22□□□□□ -2.21
ATG3Q9NT62 MIR3938-201ENST00000582157 103 ntBASIC1.22□□□□□ -2.21
ATG3Q9NT62 AC021146.9-201ENST00000512503 156 ntBASIC1.21□□□□□ -2.22
ATG3Q9NT62 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.21□□□□□ -2.22
ATG3Q9NT62 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
ATG3Q9NT62 MIR18A-201ENST00000362310 71 ntBASIC1.2□□□□□ -2.22
ATG3Q9NT62 RNU7-174P-201ENST00000516248 59 ntBASIC1.2□□□□□ -2.22
ATG3Q9NT62 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.2□□□□□ -2.22
ATG3Q9NT62 AC103810.9-201ENST00000606688 112 ntBASIC1.2□□□□□ -2.22
ATG3Q9NT62 U4.4-201ENST00000620626 117 ntBASIC1.2□□□□□ -2.22
ATG3Q9NT62 SNORD99-201ENST00000408612 74 ntBASIC1.19□□□□□ -2.22
ATG3Q9NT62 RNA5SP227-201ENST00000516184 113 ntBASIC1.19□□□□□ -2.22
ATG3Q9NT62 SCARNA17.3-201ENST00000516381 125 ntBASIC1.19□□□□□ -2.22
ATG3Q9NT62 MIR4661-201ENST00000582720 75 ntBASIC1.19□□□□□ -2.22
ATG3Q9NT62 MIR548E-201ENST00000408287 88 ntBASIC1.18□□□□□ -2.22
ATG3Q9NT62 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.18□□□□□ -2.22
ATG3Q9NT62 RNA5SP255-201ENST00000516370 107 ntBASIC1.18□□□□□ -2.22
ATG3Q9NT62 AC011195.1-201ENST00000578177 177 ntBASIC1.18□□□□□ -2.22
ATG3Q9NT62 MIR4473-201ENST00000583731 91 ntBASIC1.18□□□□□ -2.22
ATG3Q9NT62 Y_RNA.125-201ENST00000363371 111 ntBASIC1.17□□□□□ -2.22
ATG3Q9NT62 RNU6-302P-201ENST00000365249 107 ntBASIC1.17□□□□□ -2.22
ATG3Q9NT62 Y_RNA.407-201ENST00000383986 113 ntBASIC1.17□□□□□ -2.22
ATG3Q9NT62 RNA5SP268-201ENST00000516828 124 ntBASIC1.17□□□□□ -2.22
ATG3Q9NT62 MIR7107-201ENST00000611489 80 ntBASIC1.17□□□□□ -2.22
ATG3Q9NT62 SNORA70.25-201ENST00000612741 95 ntBASIC1.17□□□□□ -2.22
ATG3Q9NT62 MIR517B-201ENST00000385102 67 ntBASIC1.16□□□□□ -2.22
ATG3Q9NT62 MIR4752-201ENST00000579672 72 ntBASIC1.16□□□□□ -2.22
ATG3Q9NT62 RNU6-698P-201ENST00000363523 107 ntBASIC1.15□□□□□ -2.23
ATG3Q9NT62 RNU6-34P-201ENST00000364874 107 ntBASIC1.15□□□□□ -2.23
ATG3Q9NT62 RNA5SP94-201ENST00000516917 108 ntBASIC1.15□□□□□ -2.23
ATG3Q9NT62 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.15□□□□□ -2.23
ATG3Q9NT62 AC025627.3-201ENST00000582078 182 ntBASIC1.15□□□□□ -2.23
ATG3Q9NT62 SNORA63.6-201ENST00000364921 119 ntBASIC1.14□□□□□ -2.23
ATG3Q9NT62 SNORA15B-2-201ENST00000384058 135 ntBASIC1.14□□□□□ -2.23
ATG3Q9NT62 SNORA15B-1-201ENST00000384334 135 ntBASIC1.14□□□□□ -2.23
ATG3Q9NT62 SNORD110-201ENST00000408189 75 ntBASIC1.14□□□□□ -2.23
ATG3Q9NT62 MIR4714-201ENST00000580728 77 ntBASIC1.14□□□□□ -2.23
ATG3Q9NT62 AC090617.8-201ENST00000623339 167 ntBASIC1.14□□□□□ -2.23
ATG3Q9NT62 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ATG3Q9NT62 AC006210.1-201ENST00000424882 111 ntBASIC1.13□□□□□ -2.23
ATG3Q9NT62 RN7SL793P-201ENST00000583259 296 ntBASIC1.13□□□□□ -2.23
ATG3Q9NT62 RNY1P8-201ENST00000383970 114 ntBASIC1.12□□□□□ -2.23
ATG3Q9NT62 RNU6-936P-201ENST00000384005 107 ntBASIC1.12□□□□□ -2.23
ATG3Q9NT62 RNU6-1246P-201ENST00000391064 107 ntBASIC1.12□□□□□ -2.23
ATG3Q9NT62 SNORD113-2-201ENST00000391082 72 ntBASIC1.12□□□□□ -2.23
ATG3Q9NT62 RNU1-29P-201ENST00000606574 126 ntBASIC1.12□□□□□ -2.23
ATG3Q9NT62 Y_RNA.325-201ENST00000365171 122 ntBASIC1.11□□□□□ -2.23
ATG3Q9NT62 SNORA41B-201ENST00000384785 128 ntBASIC1.11□□□□□ -2.23
ATG3Q9NT62 Y_RNA.722-201ENST00000517279 114 ntBASIC1.11□□□□□ -2.23
ATG3Q9NT62 RNU6-1312P-201ENST00000362425 108 ntBASIC1.1□□□□□ -2.23
ATG3Q9NT62 HMGN2P22-201ENST00000427588 175 ntBASIC1.1□□□□□ -2.23
ATG3Q9NT62 ACA64.5-201ENST00000516207 127 ntBASIC1.09□□□□□ -2.23
ATG3Q9NT62 CYP3A54P-201ENST00000566950 75 ntBASIC1.09□□□□□ -2.23
ATG3Q9NT62 uc_338.10-201ENST00000621872 182 ntBASIC1.09□□□□□ -2.23
ATG3Q9NT62 MIR516B1-201ENST00000385211 90 ntBASIC1.08□□□□□ -2.24
ATG3Q9NT62 RNA5SP222-201ENST00000411039 105 ntBASIC1.08□□□□□ -2.24
ATG3Q9NT62 SNORA9.1-201ENST00000362412 131 ntBASIC1.07□□□□□ -2.24
ATG3Q9NT62 RNU6-1184P-201ENST00000384588 108 ntBASIC1.07□□□□□ -2.24
ATG3Q9NT62 MIR216A-201ENST00000385063 110 ntBASIC1.07□□□□□ -2.24
ATG3Q9NT62 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
ATG3Q9NT62 Y_RNA.246-201ENST00000364495 108 ntBASIC1.06□□□□□ -2.24
ATG3Q9NT62 AC069271.1-201ENST00000445577 156 ntBASIC1.06□□□□□ -2.24
ATG3Q9NT62 RPL39P28-201ENST00000465655 155 ntBASIC1.06□□□□□ -2.24
ATG3Q9NT62 MIR548AD-201ENST00000584780 82 ntBASIC1.06□□□□□ -2.24
ATG3Q9NT62 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
ATG3Q9NT62 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.05□□□□□ -2.24
ATG3Q9NT62 RNA5SP517-201ENST00000364724 117 ntBASIC1.04□□□□□ -2.24
ATG3Q9NT62 RNU6-351P-201ENST00000516097 100 ntBASIC1.04□□□□□ -2.24
ATG3Q9NT62 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
ATG3Q9NT62 U6.96-201ENST00000636425 70 ntBASIC1.04□□□□□ -2.24
ATG3Q9NT62 RNU4-45P-201ENST00000365469 141 ntBASIC1.03□□□□□ -2.24
ATG3Q9NT62 MIR548AG1-201ENST00000579932 66 ntBASIC1.03□□□□□ -2.24
ATG3Q9NT62 RNU6-808P-201ENST00000391233 108 ntBASIC1.02□□□□□ -2.25
ATG3Q9NT62 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.02□□□□□ -2.25
ATG3Q9NT62 RNU6-1232P-201ENST00000516299 86 ntBASIC1.02□□□□□ -2.25
ATG3Q9NT62 AC243829.6-201ENST00000612652 106 ntBASIC1.02□□□□□ -2.25
ATG3Q9NT62 MIR6513-201ENST00000621188 64 ntBASIC1.02□□□□□ -2.25
ATG3Q9NT62 RNU6-337P-201ENST00000391243 106 ntBASIC1.01□□□□□ -2.25
ATG3Q9NT62 SNORA25.18-201ENST00000607153 114 ntBASIC1.01□□□□□ -2.25
ATG3Q9NT62 MIR519A2-201ENST00000384990 87 ntBASIC1□□□□□ -2.25
ATG3Q9NT62 PSMC1P5-201ENST00000512850 177 ntBASIC1□□□□□ -2.25
ATG3Q9NT62 AC243829.3-201ENST00000622177 108 ntBASIC1□□□□□ -2.25
ATG3Q9NT62 SNORA36.2-201ENST00000384004 127 ntBASIC0.99□□□□□ -2.25
ATG3Q9NT62 SNORA49-201ENST00000386157 136 ntBASIC0.99□□□□□ -2.25
ATG3Q9NT62 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.99□□□□□ -2.25
ATG3Q9NT62 MIR1255B2-201ENST00000408618 67 ntBASIC0.99□□□□□ -2.25
ATG3Q9NT62 RNU6-518P-201ENST00000516056 96 ntBASIC0.99□□□□□ -2.25
ATG3Q9NT62 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
ATG3Q9NT62 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
ATG3Q9NT62 RNU6-520P-201ENST00000384717 104 ntBASIC0.98□□□□□ -2.25
ATG3Q9NT62 MIR936-201ENST00000401264 98 ntBASIC0.98□□□□□ -2.25
ATG3Q9NT62 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.98□□□□□ -2.25
ATG3Q9NT62 Y_RNA.74-201ENST00000362911 99 ntBASIC0.97□□□□□ -2.25
ATG3Q9NT62 MIR508-201ENST00000384857 115 ntBASIC0.97□□□□□ -2.25
ATG3Q9NT62 AC244090.1-201ENST00000441884 93 ntBASIC0.97□□□□□ -2.25
ATG3Q9NT62 AL021921.1-201ENST00000442774 93 ntBASIC0.97□□□□□ -2.25
ATG3Q9NT62 RNU6-231P-201ENST00000517122 103 ntBASIC0.97□□□□□ -2.25
ATG3Q9NT62 MIR20A-201ENST00000362279 71 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 279.6 ms