Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR513C-201ENST00000401352 84 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 SNORA19.1-201ENST00000410656 129 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 AC018880.2-201ENST00000414265 201 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 RNU6-158P-201ENST00000517104 100 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 AC104996.3-201ENST00000590718 94 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 MIR6509-201ENST00000614603 85 ntBASIC-1.27□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 RNU6-246P-201ENST00000384702 107 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 RNU6-983P-201ENST00000516004 103 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 RNU6-62P-201ENST00000516526 102 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 U7.5-201ENST00000517224 61 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 AL513043.2-201ENST00000573941 143 ntBASIC-1.28□□□□□ -2.61
TREX1Q9NSU2 SNORA63-201ENST00000363450 132 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 RNU6-824P-201ENST00000363724 104 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 MIR568-201ENST00000385036 95 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 SNORD90-201ENST00000391145 111 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 RNU7-88P-201ENST00000458752 63 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 RNU6-518P-201ENST00000516056 96 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 MIR548AG1-201ENST00000579932 66 ntBASIC-1.29□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.3□□□□□ -2.62
TREX1Q9NSU2 MIR487B-201ENST00000385021 84 ntBASIC-1.3□□□□□ -2.62
TREX1Q9NSU2 RNU6-781P-201ENST00000516377 101 ntBASIC-1.3□□□□□ -2.62
TREX1Q9NSU2 MIR4441-201ENST00000582623 100 ntBASIC-1.3□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.3□□□□□ -2.62
TREX1Q9NSU2 MIR6739-201ENST00000622461 75 ntBASIC-1.3□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 RNU6-738P-201ENST00000384531 106 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 RNA5SP292-201ENST00000390974 118 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 AL021921.1-201ENST00000442774 93 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 AL158147.1-201ENST00000443970 75 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 SNORD4B-201ENST00000459083 72 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 MIR4773-1-201ENST00000637203 78 ntBASIC-1.31□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.32□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.32□□□□□ -2.62
TREX1Q9NSU2 AL118496.2-201ENST00000448300 230 ntBASIC-1.32□□□□□ -2.62
TREX1Q9NSU2 RNU6-861P-201ENST00000516745 106 ntBASIC-1.32□□□□□ -2.62
TREX1Q9NSU2 RNU6-228P-201ENST00000362700 106 ntBASIC-1.33□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.33□□□□□ -2.62
TREX1Q9NSU2 MTATP6P29-201ENST00000415057 132 ntBASIC-1.33□□□□□ -2.62
TREX1Q9NSU2 MTND3P2-201ENST00000438452 342 ntBASIC-1.33□□□□□ -2.62
TREX1Q9NSU2 AL691482.2-201ENST00000457453 84 ntBASIC-1.33□□□□□ -2.62
TREX1Q9NSU2 AC108019.1-201ENST00000512540 175 ntBASIC-1.33□□□□□ -2.62
TREX1Q9NSU2 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.34□□□□□ -2.62
TREX1Q9NSU2 MIR577-201ENST00000385196 96 ntBASIC-1.34□□□□□ -2.62
TREX1Q9NSU2 RNU6-695P-201ENST00000391157 104 ntBASIC-1.34□□□□□ -2.62
TREX1Q9NSU2 SNORA18.5-201ENST00000516616 101 ntBASIC-1.34□□□□□ -2.62
TREX1Q9NSU2 MIR548Z-201ENST00000584743 97 ntBASIC-1.34□□□□□ -2.62
TREX1Q9NSU2 AP001340.1-201ENST00000624405 217 ntBASIC-1.34□□□□□ -2.62
TREX1Q9NSU2 RNU6-478P-201ENST00000363904 110 ntBASIC-1.35□□□□□ -2.63
TREX1Q9NSU2 RNU6-644P-201ENST00000391155 98 ntBASIC-1.35□□□□□ -2.63
TREX1Q9NSU2 MIR548Q-201ENST00000408404 100 ntBASIC-1.35□□□□□ -2.63
TREX1Q9NSU2 MIR548I1-201ENST00000408810 149 ntBASIC-1.35□□□□□ -2.63
TREX1Q9NSU2 AC025166.1-201ENST00000612411 163 ntBASIC-1.35□□□□□ -2.63
TREX1Q9NSU2 U6.81-201ENST00000612550 106 ntBASIC-1.35□□□□□ -2.63
TREX1Q9NSU2 RNU6-608P-201ENST00000383927 104 ntBASIC-1.36□□□□□ -2.63
TREX1Q9NSU2 RNA5SP272-201ENST00000516095 111 ntBASIC-1.36□□□□□ -2.63
TREX1Q9NSU2 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.36□□□□□ -2.63
TREX1Q9NSU2 RNU5F-1-201ENST00000362507 117 ntBASIC-1.37□□□□□ -2.63
TREX1Q9NSU2 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.37□□□□□ -2.63
TREX1Q9NSU2 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.37□□□□□ -2.63
TREX1Q9NSU2 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.37□□□□□ -2.63
TREX1Q9NSU2 MIR4694-201ENST00000578534 80 ntBASIC-1.37□□□□□ -2.63
TREX1Q9NSU2 MIR4439-201ENST00000583746 80 ntBASIC-1.37□□□□□ -2.63
TREX1Q9NSU2 MIR664B-201ENST00000626756 61 ntBASIC-1.37□□□□□ -2.63
TREX1Q9NSU2 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.38□□□□□ -2.63
TREX1Q9NSU2 RNU6-832P-201ENST00000363319 107 ntBASIC-1.38□□□□□ -2.63
TREX1Q9NSU2 RNU6-841P-201ENST00000383872 107 ntBASIC-1.38□□□□□ -2.63
TREX1Q9NSU2 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.38□□□□□ -2.63
TREX1Q9NSU2 MIR4756-201ENST00000577874 78 ntBASIC-1.38□□□□□ -2.63
TREX1Q9NSU2 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.38□□□□□ -2.63
TREX1Q9NSU2 SNORD116-18-201ENST00000383961 92 ntBASIC-1.39□□□□□ -2.63
TREX1Q9NSU2 RNU6-519P-201ENST00000410590 108 ntBASIC-1.39□□□□□ -2.63
TREX1Q9NSU2 MIR3613-201ENST00000579844 87 ntBASIC-1.39□□□□□ -2.63
TREX1Q9NSU2 MIR23C-201ENST00000579846 100 ntBASIC-1.39□□□□□ -2.63
TREX1Q9NSU2 U7.2-201ENST00000607576 63 ntBASIC-1.39□□□□□ -2.63
TREX1Q9NSU2 AC103810.7-201ENST00000607821 91 ntBASIC-1.39□□□□□ -2.63
TREX1Q9NSU2 U2.7-201ENST00000619197 100 ntBASIC-1.39□□□□□ -2.63
TREX1Q9NSU2 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.4□□□□□ -2.63
TREX1Q9NSU2 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.4□□□□□ -2.63
TREX1Q9NSU2 RNU6-630P-201ENST00000391258 106 ntBASIC-1.4□□□□□ -2.63
TREX1Q9NSU2 RNU6-656P-201ENST00000516785 107 ntBASIC-1.4□□□□□ -2.63
TREX1Q9NSU2 RNU6-807P-201ENST00000516805 107 ntBASIC-1.4□□□□□ -2.63
TREX1Q9NSU2 SNORA81.3-201ENST00000517283 198 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 272.1 ms