Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU6-168P-201ENST00000516189 101 ntBASIC-1.58□□□□□ -2.66
CISHQ9NSE2 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.58□□□□□ -2.66
CISHQ9NSE2 MIR3128-201ENST00000581957 66 ntBASIC-1.58□□□□□ -2.66
CISHQ9NSE2 MIR4441-201ENST00000582623 100 ntBASIC-1.58□□□□□ -2.66
CISHQ9NSE2 MIR198-201ENST00000637333 62 ntBASIC-1.58□□□□□ -2.66
CISHQ9NSE2 SNORD58C-201ENST00000365223 64 ntBASIC-1.59□□□□□ -2.66
CISHQ9NSE2 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.59□□□□□ -2.66
CISHQ9NSE2 MIR4679-2-201ENST00000578358 77 ntBASIC-1.59□□□□□ -2.66
CISHQ9NSE2 MIR4777-201ENST00000583710 86 ntBASIC-1.59□□□□□ -2.66
CISHQ9NSE2 AC072026.1-201ENST00000605023 201 ntBASIC-1.59□□□□□ -2.66
CISHQ9NSE2 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.6□□□□□ -2.67
CISHQ9NSE2 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.6□□□□□ -2.67
CISHQ9NSE2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.6□□□□□ -2.67
CISHQ9NSE2 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.6□□□□□ -2.67
CISHQ9NSE2 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.6□□□□□ -2.67
CISHQ9NSE2 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.61□□□□□ -2.67
CISHQ9NSE2 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.61□□□□□ -2.67
CISHQ9NSE2 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.62□□□□□ -2.67
CISHQ9NSE2 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.62□□□□□ -2.67
CISHQ9NSE2 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.62□□□□□ -2.67
CISHQ9NSE2 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.62□□□□□ -2.67
CISHQ9NSE2 AL117187.1-201ENST00000555482 181 ntBASIC-1.62□□□□□ -2.67
CISHQ9NSE2 U7.2-201ENST00000607576 63 ntBASIC-1.62□□□□□ -2.67
CISHQ9NSE2 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.63□□□□□ -2.67
CISHQ9NSE2 RNA5SP272-201ENST00000516095 111 ntBASIC-1.63□□□□□ -2.67
CISHQ9NSE2 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.63□□□□□ -2.67
CISHQ9NSE2 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.64□□□□□ -2.67
CISHQ9NSE2 RNU6-400P-201ENST00000391173 106 ntBASIC-1.64□□□□□ -2.67
CISHQ9NSE2 MIR513C-201ENST00000401352 84 ntBASIC-1.64□□□□□ -2.67
CISHQ9NSE2 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.64□□□□□ -2.67
CISHQ9NSE2 RNU6-752P-201ENST00000516376 102 ntBASIC-1.64□□□□□ -2.67
CISHQ9NSE2 U2.7-201ENST00000619197 100 ntBASIC-1.64□□□□□ -2.67
CISHQ9NSE2 RNU6-79P-201ENST00000362511 107 ntBASIC-1.65□□□□□ -2.67
CISHQ9NSE2 RNU6-478P-201ENST00000363904 110 ntBASIC-1.65□□□□□ -2.67
CISHQ9NSE2 RNU6-704P-201ENST00000364162 103 ntBASIC-1.65□□□□□ -2.67
CISHQ9NSE2 MIR548H1-201ENST00000408610 102 ntBASIC-1.65□□□□□ -2.67
CISHQ9NSE2 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.65□□□□□ -2.67
CISHQ9NSE2 RNU6-656P-201ENST00000516785 107 ntBASIC-1.65□□□□□ -2.67
CISHQ9NSE2 AC012531.4-201ENST00000616509 177 ntBASIC-1.65□□□□□ -2.67
CISHQ9NSE2 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 AC018880.2-201ENST00000414265 201 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 RNU6-983P-201ENST00000516004 103 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 RNU6-795P-201ENST00000516323 103 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 MIR5009-201ENST00000578736 100 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 MIR4796-201ENST00000580742 81 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 U4.2-201ENST00000618561 85 ntBASIC-1.66□□□□□ -2.68
CISHQ9NSE2 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.67□□□□□ -2.68
CISHQ9NSE2 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.67□□□□□ -2.68
CISHQ9NSE2 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.67□□□□□ -2.68
CISHQ9NSE2 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.67□□□□□ -2.68
CISHQ9NSE2 MIR1468-201ENST00000410600 86 ntBASIC-1.67□□□□□ -2.68
CISHQ9NSE2 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.67□□□□□ -2.68
CISHQ9NSE2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
CISHQ9NSE2 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 RNU6-682P-201ENST00000363843 106 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 SNORD115-27-201ENST00000364430 82 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 SNORA20.1-201ENST00000364790 130 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 SNORD58A-201ENST00000383875 65 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 RNU6-861P-201ENST00000516745 106 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 RNU6-807P-201ENST00000516805 107 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 MIR548X2-201ENST00000579776 100 ntBASIC-1.68□□□□□ -2.68
CISHQ9NSE2 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 RNA5SP331-201ENST00000364986 107 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 MIR548Q-201ENST00000408404 100 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 AL118496.2-201ENST00000448300 230 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.69□□□□□ -2.68
CISHQ9NSE2 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.7□□□□□ -2.68
CISHQ9NSE2 RNU6-608P-201ENST00000383927 104 ntBASIC-1.7□□□□□ -2.68
CISHQ9NSE2 MIR569-201ENST00000385228 96 ntBASIC-1.7□□□□□ -2.68
CISHQ9NSE2 AC062037.2-201ENST00000610137 73 ntBASIC-1.7□□□□□ -2.68
CISHQ9NSE2 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 SNORD18.1-201ENST00000363807 70 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 RNU6-340P-201ENST00000364005 107 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.71□□□□□ -2.68
CISHQ9NSE2 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 SNORD116-18-201ENST00000383961 92 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 MIR487B-201ENST00000385021 84 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 MIR568-201ENST00000385036 95 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 RNU7-120P-201ENST00000459334 63 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 RNU6-772P-201ENST00000516042 105 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 MIR4801-201ENST00000582704 82 ntBASIC-1.72□□□□□ -2.68
CISHQ9NSE2 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.73□□□□□ -2.69
CISHQ9NSE2 RNU6-458P-201ENST00000384179 107 ntBASIC-1.73□□□□□ -2.69
CISHQ9NSE2 MIR520D-201ENST00000385002 87 ntBASIC-1.73□□□□□ -2.69
CISHQ9NSE2 RNU6-972P-201ENST00000391208 107 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms