Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 MIR148A-201ENST00000362215 68 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 MIR892B-201ENST00000401279 77 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 SNORA68.3-201ENST00000515906 83 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 MIR4524B-201ENST00000581569 115 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 RNU6-92P-201ENST00000605893 104 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 MIR6773-201ENST00000612812 74 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 AL109933.3-201ENST00000619095 188 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 U6.96-201ENST00000636425 70 ntBASIC0.2□□□□□ -2.38
LCE3DQ9BYE3 RNU6-502P-201ENST00000362419 108 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 SNORD115-25-201ENST00000362619 82 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 Y_RNA.500-201ENST00000384466 111 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 MIRLET7B-201ENST00000385140 83 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 MIR634-201ENST00000385208 97 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 snoU13.13-201ENST00000458842 104 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 RNU7-95P-201ENST00000459222 64 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 MIR3925-201ENST00000584674 77 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 MIR6852-201ENST00000621699 66 ntBASIC0.19□□□□□ -2.38
LCE3DQ9BYE3 RNA5SP98-201ENST00000363158 137 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 SNORD115-23-201ENST00000364461 82 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 RNU6-127P-201ENST00000390897 107 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 RNU6-337P-201ENST00000391243 106 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 AP1B1P2-201ENST00000416196 106 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 AL591806.2-201ENST00000433122 173 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 snoU13.15-201ENST00000459407 104 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 CR383656.4-201ENST00000546909 122 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 CYP3A54P-201ENST00000566950 75 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 MIR4698-201ENST00000577795 80 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 MIR6798-201ENST00000612887 67 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 U4.4-201ENST00000620626 117 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 MIR4315-1-201ENST00000636800 73 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 MIR4315-2-201ENST00000640925 73 ntBASIC0.18□□□□□ -2.38
LCE3DQ9BYE3 RNU1-17P-201ENST00000363022 152 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 Y_RNA.246-201ENST00000364495 108 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 MIR92A1-201ENST00000385233 78 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 RNU4-62P-201ENST00000410125 130 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 RNU6-518P-201ENST00000516056 96 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 RN7SL660P-201ENST00000614852 299 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 MIR6835-201ENST00000621552 64 ntBASIC0.17□□□□□ -2.38
LCE3DQ9BYE3 MIR103A1-201ENST00000362165 78 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 Y_RNA.74-201ENST00000362911 99 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNA5SP192-201ENST00000364404 120 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNU6-499P-201ENST00000365615 107 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 MIR9-2-201ENST00000384838 87 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 MIR1289-2-201ENST00000408360 111 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNU7-129P-201ENST00000516128 62 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 RNU6-180P-201ENST00000516697 61 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.16□□□□□ -2.38
LCE3DQ9BYE3 MIR429-201ENST00000362106 83 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 SNORD60.1-201ENST00000362451 73 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 SNORD116-16-201ENST00000384533 92 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 MIR1255B2-201ENST00000408618 67 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 MIR548H2-201ENST00000408874 88 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 AC079150.2-201ENST00000443733 78 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 snoU13.26-201ENST00000459452 105 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 AC090617.8-201ENST00000623339 167 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 MIR499B-201ENST00000636498 73 ntBASIC0.15□□□□□ -2.39
LCE3DQ9BYE3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 RNU6-900P-201ENST00000384498 102 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 RNU6-520P-201ENST00000384717 104 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR548C-201ENST00000384815 97 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR630-201ENST00000384957 97 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR519A2-201ENST00000384990 87 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 SNORA11.2-201ENST00000408318 127 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR548J-201ENST00000408833 112 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 RNU7-55P-201ENST00000459426 62 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR3973-201ENST00000579824 107 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR466-201ENST00000580653 84 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR3938-201ENST00000582157 103 ntBASIC0.14□□□□□ -2.39
LCE3DQ9BYE3 MIR378A-201ENST00000362177 66 ntBASIC0.13□□□□□ -2.39
LCE3DQ9BYE3 RNU6-973P-201ENST00000364690 107 ntBASIC0.13□□□□□ -2.39
LCE3DQ9BYE3 SNORA62.4-201ENST00000365504 151 ntBASIC0.13□□□□□ -2.39
LCE3DQ9BYE3 MIR508-201ENST00000384857 115 ntBASIC0.13□□□□□ -2.39
LCE3DQ9BYE3 MIR610-201ENST00000385139 96 ntBASIC0.13□□□□□ -2.39
LCE3DQ9BYE3 SNORD114-26-201ENST00000363543 72 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 Y_RNA.282-201ENST00000364793 102 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 Y_RNA.325-201ENST00000365171 122 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 MIR1261-201ENST00000408659 82 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 AC096531.1-201ENST00000419107 107 ntBASIC0.12□□□□□ -2.39
LCE3DQ9BYE3 AC114737.2-201ENST00000421583 173 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms