Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 RNU6-881P-201ENST00000516813 102 ntBASIC-0.87□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-24P-201ENST00000384440 107 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 SNORD116-21-201ENST00000384507 92 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-887P-201ENST00000410660 100 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 AC021146.9-201ENST00000512503 156 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-904P-201ENST00000516206 101 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 SNORA18.5-201ENST00000516616 101 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 MIR3179-1-201ENST00000578940 84 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 MIR3179-2-201ENST00000579107 84 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 MIR3179-3-201ENST00000579566 84 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 MIR5704-201ENST00000584029 77 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 MIR3179-4-201ENST00000617599 84 ntBASIC-0.88□□□□□ -2.55
KLHDC3Q9BQ90 SNORD58A-201ENST00000383875 65 ntBASIC-0.89□□□□□ -2.55
KLHDC3Q9BQ90 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.89□□□□□ -2.55
KLHDC3Q9BQ90 MIR1285-2-201ENST00000408311 88 ntBASIC-0.89□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-592P-201ENST00000411333 103 ntBASIC-0.89□□□□□ -2.55
KLHDC3Q9BQ90 AC006254.2-201ENST00000603259 279 ntBASIC-0.89□□□□□ -2.55
KLHDC3Q9BQ90 RNU5F-1-201ENST00000362507 117 ntBASIC-0.9□□□□□ -2.55
KLHDC3Q9BQ90 SNORD115-23-201ENST00000364461 82 ntBASIC-0.9□□□□□ -2.55
KLHDC3Q9BQ90 SNORD74.6-201ENST00000364796 70 ntBASIC-0.9□□□□□ -2.55
KLHDC3Q9BQ90 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.9□□□□□ -2.55
KLHDC3Q9BQ90 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.9□□□□□ -2.55
KLHDC3Q9BQ90 RNU6-226P-201ENST00000363778 107 ntBASIC-0.91□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-990P-201ENST00000364385 104 ntBASIC-0.91□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-337P-201ENST00000391243 106 ntBASIC-0.91□□□□□ -2.56
KLHDC3Q9BQ90 SNORD22.1-201ENST00000516331 125 ntBASIC-0.91□□□□□ -2.56
KLHDC3Q9BQ90 MIR4723-201ENST00000585070 81 ntBASIC-0.91□□□□□ -2.56
KLHDC3Q9BQ90 U4.2-201ENST00000618561 85 ntBASIC-0.91□□□□□ -2.56
KLHDC3Q9BQ90 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.91□□□□□ -2.56
KLHDC3Q9BQ90 SNORD116-10-201ENST00000363791 102 ntBASIC-0.92□□□□□ -2.56
KLHDC3Q9BQ90 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
KLHDC3Q9BQ90 MIR548I1-201ENST00000408810 149 ntBASIC-0.92□□□□□ -2.56
KLHDC3Q9BQ90 SNORA19.1-201ENST00000410656 129 ntBASIC-0.92□□□□□ -2.56
KLHDC3Q9BQ90 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.92□□□□□ -2.56
KLHDC3Q9BQ90 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.92□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-209P-201ENST00000384118 107 ntBASIC-0.93□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-704P-201ENST00000364162 103 ntBASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 SNORD90-201ENST00000391145 111 ntBASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-721P-201ENST00000410155 105 ntBASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 MIR8068-201ENST00000618032 68 ntBASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 U6.96-201ENST00000636425 70 ntBASIC-0.94□□□□□ -2.56
KLHDC3Q9BQ90 MIR365A-201ENST00000362260 87 ntBASIC-0.95□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-382P-201ENST00000365181 106 ntBASIC-0.95□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.95□□□□□ -2.56
KLHDC3Q9BQ90 MIR1302-5-201ENST00000408164 150 ntBASIC-0.95□□□□□ -2.56
KLHDC3Q9BQ90 YWHAEP3-201ENST00000582767 121 ntBASIC-0.95□□□□□ -2.56
KLHDC3Q9BQ90 SNORA62.4-201ENST00000365504 151 ntBASIC-0.96□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.96□□□□□ -2.56
KLHDC3Q9BQ90 AC022137.1-201ENST00000483735 151 ntBASIC-0.96□□□□□ -2.56
KLHDC3Q9BQ90 MIR3133-201ENST00000583157 78 ntBASIC-0.96□□□□□ -2.56
KLHDC3Q9BQ90 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.97□□□□□ -2.56
KLHDC3Q9BQ90 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.97□□□□□ -2.56
KLHDC3Q9BQ90 AP000533.3-201ENST00000447704 118 ntBASIC-0.97□□□□□ -2.56
KLHDC3Q9BQ90 RNU6-260P-201ENST00000384092 107 ntBASIC-0.98□□□□□ -2.57
KLHDC3Q9BQ90 RNA5SP180-201ENST00000516181 101 ntBASIC-0.98□□□□□ -2.57
KLHDC3Q9BQ90 MIR1246-201ENST00000636535 73 ntBASIC-0.98□□□□□ -2.57
KLHDC3Q9BQ90 MIR4773-1-201ENST00000637203 78 ntBASIC-0.98□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-824P-201ENST00000363724 104 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 snoU13.17-201ENST00000458802 104 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-537P-201ENST00000517277 103 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 AC026421.1-201ENST00000519101 163 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 MIR4796-201ENST00000580742 81 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 MIR4441-201ENST00000582623 100 ntBASIC-0.99□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.12-201ENST00000362393 112 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 SNORA2.1-201ENST00000363089 137 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.107-201ENST00000363190 121 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-746P-201ENST00000384112 109 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-1113P-201ENST00000384348 107 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-905P-201ENST00000384434 107 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.558-201ENST00000384685 113 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 MIR590-201ENST00000385008 97 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 MIR517B-201ENST00000385102 67 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 AC008267.6-201ENST00000441664 139 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 RNU7-61P-201ENST00000515897 61 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-1236P-201ENST00000517080 99 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 MIR6509-201ENST00000614603 85 ntBASIC-1□□□□□ -2.57
KLHDC3Q9BQ90 SNORD114-3-201ENST00000364969 75 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 MIR1236-201ENST00000408340 102 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 MIR3671-201ENST00000580455 88 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 MIR3668-201ENST00000582138 75 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 U6.81-201ENST00000612550 106 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.01□□□□□ -2.57
KLHDC3Q9BQ90 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.02□□□□□ -2.57
KLHDC3Q9BQ90 RNU6-959P-201ENST00000384671 107 ntBASIC-1.02□□□□□ -2.57
KLHDC3Q9BQ90 MIR198-201ENST00000637333 62 ntBASIC-1.02□□□□□ -2.57
KLHDC3Q9BQ90 AL691482.2-201ENST00000457453 84 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms