Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR4436A-201ENST00000585278 85 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-834P-201ENST00000362367 110 ntBASIC-0.56□□□□□ -2.5
FOXC2Q99958 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.56□□□□□ -2.5
FOXC2Q99958 RNU6-824P-201ENST00000363724 104 ntBASIC-0.56□□□□□ -2.5
FOXC2Q99958 SNORA13-201ENST00000458790 133 ntBASIC-0.56□□□□□ -2.5
FOXC2Q99958 RNU6-589P-201ENST00000516485 107 ntBASIC-0.56□□□□□ -2.5
FOXC2Q99958 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.56□□□□□ -2.5
FOXC2Q99958 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.56□□□□□ -2.5
FOXC2Q99958 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.57□□□□□ -2.5
FOXC2Q99958 MIR5704-201ENST00000584029 77 ntBASIC-0.57□□□□□ -2.5
FOXC2Q99958 RNU4-32P-201ENST00000363404 141 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 SNORA3B-201ENST00000391305 131 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 RNU7-61P-201ENST00000515897 61 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 RNU6-109P-201ENST00000516364 107 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 RNU6-184P-201ENST00000516514 107 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 MIR3681-201ENST00000580089 72 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 YWHAEP3-201ENST00000582767 121 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 AC006254.2-201ENST00000603259 279 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 MIR6854-201ENST00000614935 69 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 MIR8068-201ENST00000618032 68 ntBASIC-0.58□□□□□ -2.5
FOXC2Q99958 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 RNU6-260P-201ENST00000384092 107 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 SNORA19-201ENST00000384737 128 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 MIR518B-201ENST00000385127 83 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 RNU6-158P-201ENST00000517104 100 ntBASIC-0.59□□□□□ -2.5
FOXC2Q99958 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 SNORD74.6-201ENST00000364796 70 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 RNU6-22P-201ENST00000384355 107 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 MIR204-201ENST00000385200 110 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 RNU6-721P-201ENST00000410155 105 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 MIR4796-201ENST00000580742 81 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 U6.81-201ENST00000612550 106 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 MIR6129-201ENST00000616087 109 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 AC090617.8-201ENST00000623339 167 ntBASIC-0.6□□□□□ -2.51
FOXC2Q99958 MIR1236-201ENST00000408340 102 ntBASIC-0.61□□□□□ -2.51
FOXC2Q99958 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.61□□□□□ -2.51
FOXC2Q99958 AC021146.9-201ENST00000512503 156 ntBASIC-0.61□□□□□ -2.51
FOXC2Q99958 AC021146.6-201ENST00000514659 117 ntBASIC-0.61□□□□□ -2.51
FOXC2Q99958 U7.3-201ENST00000616123 62 ntBASIC-0.61□□□□□ -2.51
FOXC2Q99958 RNU6-766P-201ENST00000362478 107 ntBASIC-0.62□□□□□ -2.51
FOXC2Q99958 RNU5F-1-201ENST00000362507 117 ntBASIC-0.62□□□□□ -2.51
FOXC2Q99958 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.62□□□□□ -2.51
FOXC2Q99958 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.62□□□□□ -2.51
FOXC2Q99958 SNORA2.1-201ENST00000363089 137 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 SNORD113-1-201ENST00000365321 69 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 MIR548M-201ENST00000408260 86 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 MTATP8P2-201ENST00000435212 202 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 SNORD22.1-201ENST00000516331 125 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 RNU6-479P-201ENST00000516348 105 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 MIR3657-201ENST00000584818 117 ntBASIC-0.63□□□□□ -2.51
FOXC2Q99958 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 MIR601-201ENST00000385256 79 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 RNU6-162P-201ENST00000516228 103 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 RNU7-153P-201ENST00000516455 62 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 RNU6-881P-201ENST00000516813 102 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 MIR3179-1-201ENST00000578940 84 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 MIR3179-2-201ENST00000579107 84 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 MIR3179-3-201ENST00000579566 84 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 MIR4464-201ENST00000580818 92 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 MIR3179-4-201ENST00000617599 84 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 U6.96-201ENST00000636425 70 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 MIR4773-1-201ENST00000637203 78 ntBASIC-0.64□□□□□ -2.51
FOXC2Q99958 RNU6-905P-201ENST00000384434 107 ntBASIC-0.65□□□□□ -2.51
FOXC2Q99958 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
FOXC2Q99958 MIR6509-201ENST00000614603 85 ntBASIC-0.65□□□□□ -2.51
FOXC2Q99958 SNORD115-27-201ENST00000364430 82 ntBASIC-0.66□□□□□ -2.52
FOXC2Q99958 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.66□□□□□ -2.52
FOXC2Q99958 MIR3910-1-201ENST00000580936 111 ntBASIC-0.66□□□□□ -2.52
FOXC2Q99958 snoR1.1-201ENST00000628177 80 ntBASIC-0.66□□□□□ -2.52
FOXC2Q99958 MIR198-201ENST00000637333 62 ntBASIC-0.66□□□□□ -2.52
FOXC2Q99958 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.67□□□□□ -2.52
FOXC2Q99958 SNORA33.1-201ENST00000364957 130 ntBASIC-0.67□□□□□ -2.52
FOXC2Q99958 SNORA62.4-201ENST00000365504 151 ntBASIC-0.67□□□□□ -2.52
FOXC2Q99958 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.67□□□□□ -2.52
FOXC2Q99958 MIR587-201ENST00000384845 96 ntBASIC-0.67□□□□□ -2.52
FOXC2Q99958 MIR203A-201ENST00000384836 110 ntBASIC-0.68□□□□□ -2.52
FOXC2Q99958 AL691482.2-201ENST00000457453 84 ntBASIC-0.68□□□□□ -2.52
FOXC2Q99958 RNU6-752P-201ENST00000516376 102 ntBASIC-0.68□□□□□ -2.52
FOXC2Q99958 RNU6-208P-201ENST00000362431 107 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 RNU6-633P-201ENST00000362612 103 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 RNU6-340P-201ENST00000364005 107 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 RNU6-497P-201ENST00000365316 104 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 MIR521-2-201ENST00000384818 87 ntBASIC-0.69□□□□□ -2.52
FOXC2Q99958 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 272.3 ms