Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SNORD113.1-201ENST00000363280 73 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 RNU6-540P-201ENST00000384622 101 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 MIR516B1-201ENST00000385211 90 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 SNORD30.1-201ENST00000391309 70 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 RNU6-982P-201ENST00000516216 102 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 RNU6-881P-201ENST00000516813 102 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 SNORA40.17-201ENST00000517256 115 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 U7.6-201ENST00000610841 64 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 MIR499B-201ENST00000636498 73 ntBASIC0.49□□□□□ -2.33
TIMP4Q99727 SNORA2.1-201ENST00000363089 137 ntBASIC0.48□□□□□ -2.33
TIMP4Q99727 MIR7-2-201ENST00000384970 110 ntBASIC0.48□□□□□ -2.33
TIMP4Q99727 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
TIMP4Q99727 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
TIMP4Q99727 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
TIMP4Q99727 MIR582-201ENST00000365731 98 ntBASIC0.47□□□□□ -2.33
TIMP4Q99727 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
TIMP4Q99727 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
TIMP4Q99727 RNU6-649P-201ENST00000384463 107 ntBASIC0.46□□□□□ -2.34
TIMP4Q99727 MIR501-201ENST00000390204 84 ntBASIC0.46□□□□□ -2.34
TIMP4Q99727 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
TIMP4Q99727 AC114801.3-201ENST00000510231 177 ntBASIC0.46□□□□□ -2.34
TIMP4Q99727 AC021146.9-201ENST00000512503 156 ntBASIC0.46□□□□□ -2.34
TIMP4Q99727 RN7SL793P-201ENST00000583259 296 ntBASIC0.46□□□□□ -2.34
TIMP4Q99727 RNA5SP128-201ENST00000365305 116 ntBASIC0.45□□□□□ -2.34
TIMP4Q99727 RNU6-663P-201ENST00000391105 106 ntBASIC0.45□□□□□ -2.34
TIMP4Q99727 RNA5SP480-201ENST00000516840 109 ntBASIC0.45□□□□□ -2.34
TIMP4Q99727 MIR4677-201ENST00000584153 80 ntBASIC0.45□□□□□ -2.34
TIMP4Q99727 AC084368.1-201ENST00000620935 65 ntBASIC0.45□□□□□ -2.34
TIMP4Q99727 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
TIMP4Q99727 RNU6-1216P-201ENST00000362590 107 ntBASIC0.44□□□□□ -2.34
TIMP4Q99727 SNORD114-26-201ENST00000363543 72 ntBASIC0.44□□□□□ -2.34
TIMP4Q99727 RNU6-645P-201ENST00000364649 106 ntBASIC0.44□□□□□ -2.34
TIMP4Q99727 MIR548E-201ENST00000408287 88 ntBASIC0.44□□□□□ -2.34
TIMP4Q99727 RNU7-188P-201ENST00000517063 64 ntBASIC0.44□□□□□ -2.34
TIMP4Q99727 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
TIMP4Q99727 MIR20A-201ENST00000362279 71 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 SNORA63.6-201ENST00000364921 119 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 RNU6-848P-201ENST00000515948 107 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 RNU6-617P-201ENST00000516147 107 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 RNU6-473P-201ENST00000516164 107 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 RNU6-1049P-201ENST00000516414 107 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
TIMP4Q99727 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
TIMP4Q99727 SNORD114-29-201ENST00000364819 70 ntBASIC0.42□□□□□ -2.34
TIMP4Q99727 RNU6-1162P-201ENST00000384443 104 ntBASIC0.42□□□□□ -2.34
TIMP4Q99727 RNU6-863P-201ENST00000515989 104 ntBASIC0.42□□□□□ -2.34
TIMP4Q99727 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
TIMP4Q99727 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 RNU6-668P-201ENST00000364180 107 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 RNU6-815P-201ENST00000384080 113 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 AC244090.1-201ENST00000441884 93 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 MTND4LP1-201ENST00000446263 157 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 AC139453.2-201ENST00000487255 133 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 MIR548AD-201ENST00000584780 82 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 MIR6739-201ENST00000622461 75 ntBASIC0.41□□□□□ -2.34
TIMP4Q99727 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.41□□□□□ -2.34
TIMP4Q99727 SNORA9.1-201ENST00000362412 131 ntBASIC0.4□□□□□ -2.35
TIMP4Q99727 SNORD116-24-201ENST00000384549 92 ntBASIC0.4□□□□□ -2.35
TIMP4Q99727 RNU6-656P-201ENST00000516785 107 ntBASIC0.4□□□□□ -2.35
TIMP4Q99727 RNA5SP62-201ENST00000363457 110 ntBASIC0.39□□□□□ -2.35
TIMP4Q99727 Y_RNA.250-201ENST00000364542 110 ntBASIC0.39□□□□□ -2.35
TIMP4Q99727 MIR548C-201ENST00000384815 97 ntBASIC0.39□□□□□ -2.35
TIMP4Q99727 MIR521-2-201ENST00000384818 87 ntBASIC0.39□□□□□ -2.35
TIMP4Q99727 RNU6-630P-201ENST00000391258 106 ntBASIC0.39□□□□□ -2.35
TIMP4Q99727 MIR3925-201ENST00000584674 77 ntBASIC0.39□□□□□ -2.35
TIMP4Q99727 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
TIMP4Q99727 SNORA33.1-201ENST00000364957 130 ntBASIC0.38□□□□□ -2.35
TIMP4Q99727 RNU6-539P-201ENST00000516665 103 ntBASIC0.38□□□□□ -2.35
TIMP4Q99727 SCARNA11.2-201ENST00000517183 154 ntBASIC0.38□□□□□ -2.35
TIMP4Q99727 U6.111-201ENST00000636093 83 ntBASIC0.38□□□□□ -2.35
TIMP4Q99727 U6.96-201ENST00000636425 70 ntBASIC0.38□□□□□ -2.35
TIMP4Q99727 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
TIMP4Q99727 SNORA15B-2-201ENST00000384058 135 ntBASIC0.37□□□□□ -2.35
TIMP4Q99727 SNORA15B-1-201ENST00000384334 135 ntBASIC0.37□□□□□ -2.35
TIMP4Q99727 MIR643-201ENST00000385267 97 ntBASIC0.37□□□□□ -2.35
TIMP4Q99727 Y_RNA.633-201ENST00000459107 95 ntBASIC0.37□□□□□ -2.35
TIMP4Q99727 RNU6-175P-201ENST00000516896 107 ntBASIC0.37□□□□□ -2.35
TIMP4Q99727 RN7SL660P-201ENST00000614852 299 ntBASIC0.37□□□□□ -2.35
TIMP4Q99727 AL109933.3-201ENST00000619095 188 ntBASIC0.37□□□□□ -2.35
TIMP4Q99727 RNU6-1036P-201ENST00000383959 104 ntBASIC0.36□□□□□ -2.35
TIMP4Q99727 RNU6-127P-201ENST00000390897 107 ntBASIC0.36□□□□□ -2.35
TIMP4Q99727 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
TIMP4Q99727 Y_RNA.443-201ENST00000384135 111 ntBASIC0.35□□□□□ -2.35
TIMP4Q99727 RNU6-800P-201ENST00000384473 103 ntBASIC0.35□□□□□ -2.35
TIMP4Q99727 MIR193B-201ENST00000384907 83 ntBASIC0.35□□□□□ -2.35
TIMP4Q99727 Y_RNA.205-201ENST00000364128 113 ntBASIC0.34□□□□□ -2.36
TIMP4Q99727 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
TIMP4Q99727 MIR6779-201ENST00000617283 64 ntBASIC0.34□□□□□ -2.36
TIMP4Q99727 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
TIMP4Q99727 RNU6-1089P-201ENST00000516473 104 ntBASIC0.33□□□□□ -2.36
TIMP4Q99727 AC069113.3-201ENST00000521019 150 ntBASIC0.33□□□□□ -2.36
TIMP4Q99727 AC005520.4-201ENST00000604337 90 ntBASIC0.33□□□□□ -2.36
TIMP4Q99727 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
TIMP4Q99727 MIR548V-201ENST00000584165 80 ntBASIC0.32□□□□□ -2.36
TIMP4Q99727 SNORA49-201ENST00000386157 136 ntBASIC0.31□□□□□ -2.36
TIMP4Q99727 SNORA75.1-201ENST00000391130 148 ntBASIC0.31□□□□□ -2.36
TIMP4Q99727 MIR876-201ENST00000401147 81 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms