Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR548AL-201ENST00000578416 97 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 MIR4422-201ENST00000581938 83 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 AC022709.1-201ENST00000615967 87 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 MIR6515-201ENST00000619843 57 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 AC243829.3-201ENST00000622177 108 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
TRIM47Q96LD4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.68□□□□□ -2.14
TRIM47Q96LD4 AC243829.6-201ENST00000612652 106 ntBASIC1.68□□□□□ -2.14
TRIM47Q96LD4 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 MIR579-201ENST00000385221 98 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 RNU1-78P-201ENST00000391248 165 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 U7.7-201ENST00000459276 60 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 MIR3678-201ENST00000578455 94 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 AC006210.1-201ENST00000424882 111 ntBASIC1.65□□□□□ -2.15
TRIM47Q96LD4 RNU6-1206P-201ENST00000516339 103 ntBASIC1.65□□□□□ -2.15
TRIM47Q96LD4 MIR6779-201ENST00000617283 64 ntBASIC1.65□□□□□ -2.15
TRIM47Q96LD4 MIR429-201ENST00000362106 83 ntBASIC1.64□□□□□ -2.15
TRIM47Q96LD4 RNA5SP325-201ENST00000363756 130 ntBASIC1.64□□□□□ -2.15
TRIM47Q96LD4 RNU1-93P-201ENST00000364704 169 ntBASIC1.64□□□□□ -2.15
TRIM47Q96LD4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM47Q96LD4 RNU6-458P-201ENST00000384179 107 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 SNORD110-201ENST00000408189 75 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 U6.58-201ENST00000613107 107 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 U6.103-201ENST00000637085 61 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 Y_RNA.69-201ENST00000362885 109 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 SNORD105-201ENST00000386910 85 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 SNORD89-201ENST00000390981 114 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 RNU7-160P-201ENST00000516660 62 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 SNORA70.22-201ENST00000517160 124 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM47Q96LD4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.61□□□□□ -2.15
TRIM47Q96LD4 RNU7-154P-201ENST00000516194 62 ntBASIC1.61□□□□□ -2.15
TRIM47Q96LD4 SNORD115-25-201ENST00000362619 82 ntBASIC1.6□□□□□ -2.15
TRIM47Q96LD4 RNU7-151P-201ENST00000516930 53 ntBASIC1.6□□□□□ -2.15
TRIM47Q96LD4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.6□□□□□ -2.15
TRIM47Q96LD4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
TRIM47Q96LD4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRIM47Q96LD4 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 SNORD12-201ENST00000391002 90 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNA5SP227-201ENST00000516184 113 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM47Q96LD4 MIR6828-201ENST00000636181 60 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 SNORD114-27-201ENST00000363766 70 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 RNU6-1204P-201ENST00000363948 107 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 AC002429.1-201ENST00000437672 148 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 MIR3612-201ENST00000579753 87 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 AC025627.3-201ENST00000582078 182 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 U2.18-201ENST00000622185 84 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 RNU6-598P-201ENST00000364017 105 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 MIR598-201ENST00000384868 97 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 MIR329-2-201ENST00000385029 84 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 RNU6-337P-201ENST00000391243 106 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 RPS29P1-201ENST00000465274 159 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 RNU6-822P-201ENST00000362707 106 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 MIR573-201ENST00000384964 99 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 MIR222-201ENST00000384992 110 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 AC098934.3-201ENST00000430450 190 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 AC244090.1-201ENST00000441884 93 ntBASIC1.55□□□□□ -2.16
TRIM47Q96LD4 AL451105.1-201ENST00000450005 189 ntBASIC1.55□□□□□ -2.16
TRIM47Q96LD4 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
TRIM47Q96LD4 MIR151B-201ENST00000584249 96 ntBASIC1.54□□□□□ -2.16
TRIM47Q96LD4 MIR6773-201ENST00000612812 74 ntBASIC1.54□□□□□ -2.16
TRIM47Q96LD4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRIM47Q96LD4 MIR20A-201ENST00000362279 71 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNU6-828P-201ENST00000364876 107 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNU6-721P-201ENST00000410155 105 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNA5SP470-201ENST00000516463 106 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 SNORA70.25-201ENST00000612741 95 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 MIR6788-201ENST00000618842 66 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 MIR6767-201ENST00000637302 66 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
TRIM47Q96LD4 SNORA36.1-201ENST00000363424 132 ntBASIC1.51□□□□□ -2.17
TRIM47Q96LD4 RNU6-742P-201ENST00000365289 107 ntBASIC1.51□□□□□ -2.17
TRIM47Q96LD4 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
TRIM47Q96LD4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
TRIM47Q96LD4 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RNU6-1008P-201ENST00000384160 104 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 MIR548J-201ENST00000408833 112 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 HMGN2P22-201ENST00000427588 175 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RNA5SP268-201ENST00000516828 124 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RNU6-945P-201ENST00000383947 107 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 MIR125B1-201ENST00000385236 88 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 RNU6-995P-201ENST00000391244 107 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 FABP5P4-201ENST00000437203 171 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 RNY1P8-201ENST00000383970 114 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 SNORD2-201ENST00000459163 69 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 MIR4752-201ENST00000579672 72 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 AC138207.3-201ENST00000585289 166 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 MIRLET7B-201ENST00000385140 83 ntBASIC1.47□□□□□ -2.17
TRIM47Q96LD4 SNORA49-201ENST00000386157 136 ntBASIC1.47□□□□□ -2.17
TRIM47Q96LD4 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
TRIM47Q96LD4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 295.9 ms