Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SNORD45A-201ENST00000384512 84 ntBASIC0.56□□□□□ -2.32
CALR3Q96L12 SNORD2-201ENST00000459163 69 ntBASIC0.56□□□□□ -2.32
CALR3Q96L12 MIR6739-201ENST00000622461 75 ntBASIC0.56□□□□□ -2.32
CALR3Q96L12 snoU13.13-201ENST00000458842 104 ntBASIC0.55□□□□□ -2.32
CALR3Q96L12 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
CALR3Q96L12 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.55□□□□□ -2.32
CALR3Q96L12 RNU6-127P-201ENST00000390897 107 ntBASIC0.54□□□□□ -2.32
CALR3Q96L12 SNORA75.1-201ENST00000391130 148 ntBASIC0.54□□□□□ -2.32
CALR3Q96L12 MIR876-201ENST00000401147 81 ntBASIC0.54□□□□□ -2.32
CALR3Q96L12 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.54□□□□□ -2.32
CALR3Q96L12 SNORD113.1-201ENST00000363280 73 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 SNORD115-31-201ENST00000365318 82 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 SNORD114-22-201ENST00000365423 72 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 SNORA15B-2-201ENST00000384058 135 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 RNU6-895P-201ENST00000384125 103 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 SNORA15B-1-201ENST00000384334 135 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 RNU6-1162P-201ENST00000384443 104 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 RNU6-881P-201ENST00000516813 102 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 RNU6-782P-201ENST00000516852 104 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 MIR4452-201ENST00000583004 71 ntBASIC0.53□□□□□ -2.32
CALR3Q96L12 Y_RNA.633-201ENST00000459107 95 ntBASIC0.52□□□□□ -2.33
CALR3Q96L12 SCARNA11.2-201ENST00000517183 154 ntBASIC0.52□□□□□ -2.33
CALR3Q96L12 RNU6-175P-201ENST00000516896 107 ntBASIC0.51□□□□□ -2.33
CALR3Q96L12 MIR521-2-201ENST00000384818 87 ntBASIC0.5□□□□□ -2.33
CALR3Q96L12 MIR499A-201ENST00000384903 122 ntBASIC0.5□□□□□ -2.33
CALR3Q96L12 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CALR3Q96L12 AC108740.1-201ENST00000498629 225 ntBASIC0.5□□□□□ -2.33
CALR3Q96L12 RNU6-645P-201ENST00000364649 106 ntBASIC0.49□□□□□ -2.33
CALR3Q96L12 RNU6-982P-201ENST00000516216 102 ntBASIC0.49□□□□□ -2.33
CALR3Q96L12 Y_RNA.676-201ENST00000516393 96 ntBASIC0.49□□□□□ -2.33
CALR3Q96L12 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.49□□□□□ -2.33
CALR3Q96L12 MIR151B-201ENST00000584249 96 ntBASIC0.48□□□□□ -2.33
CALR3Q96L12 RN7SL660P-201ENST00000614852 299 ntBASIC0.48□□□□□ -2.33
CALR3Q96L12 MIR6788-201ENST00000618842 66 ntBASIC0.48□□□□□ -2.33
CALR3Q96L12 MIR4315-1-201ENST00000636800 73 ntBASIC0.48□□□□□ -2.33
CALR3Q96L12 MIR4315-2-201ENST00000640925 73 ntBASIC0.48□□□□□ -2.33
CALR3Q96L12 Y_RNA.224-201ENST00000364308 111 ntBASIC0.47□□□□□ -2.33
CALR3Q96L12 MTND4LP1-201ENST00000446263 157 ntBASIC0.47□□□□□ -2.33
CALR3Q96L12 RNU6-1216P-201ENST00000362590 107 ntBASIC0.46□□□□□ -2.34
CALR3Q96L12 RNU6-540P-201ENST00000384622 101 ntBASIC0.46□□□□□ -2.34
CALR3Q96L12 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
CALR3Q96L12 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
CALR3Q96L12 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
CALR3Q96L12 MIR643-201ENST00000385267 97 ntBASIC0.45□□□□□ -2.34
CALR3Q96L12 MIR548J-201ENST00000408833 112 ntBASIC0.45□□□□□ -2.34
CALR3Q96L12 RNA5SP134-201ENST00000516492 96 ntBASIC0.45□□□□□ -2.34
CALR3Q96L12 RNU6-656P-201ENST00000516785 107 ntBASIC0.45□□□□□ -2.34
CALR3Q96L12 MIR4714-201ENST00000580728 77 ntBASIC0.45□□□□□ -2.34
CALR3Q96L12 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
CALR3Q96L12 MIR5000-201ENST00000577717 103 ntBASIC0.44□□□□□ -2.34
CALR3Q96L12 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
CALR3Q96L12 RNU6-1036P-201ENST00000383959 104 ntBASIC0.43□□□□□ -2.34
CALR3Q96L12 RNU6-663P-201ENST00000391105 106 ntBASIC0.42□□□□□ -2.34
CALR3Q96L12 SNORD30.1-201ENST00000391309 70 ntBASIC0.42□□□□□ -2.34
CALR3Q96L12 U6.96-201ENST00000636425 70 ntBASIC0.42□□□□□ -2.34
CALR3Q96L12 SNORA33.1-201ENST00000364957 130 ntBASIC0.41□□□□□ -2.34
CALR3Q96L12 RNU6-649P-201ENST00000384463 107 ntBASIC0.41□□□□□ -2.34
CALR3Q96L12 MIR106A-201ENST00000384870 81 ntBASIC0.41□□□□□ -2.34
CALR3Q96L12 RNA5SP220-201ENST00000516298 104 ntBASIC0.41□□□□□ -2.34
CALR3Q96L12 RNU6-1223P-201ENST00000517124 104 ntBASIC0.41□□□□□ -2.34
CALR3Q96L12 RNU6-668P-201ENST00000364180 107 ntBASIC0.4□□□□□ -2.35
CALR3Q96L12 SNORA49-201ENST00000386157 136 ntBASIC0.4□□□□□ -2.35
CALR3Q96L12 MIR892B-201ENST00000401279 77 ntBASIC0.4□□□□□ -2.35
CALR3Q96L12 MIR1287-201ENST00000408492 90 ntBASIC0.39□□□□□ -2.35
CALR3Q96L12 AC114801.3-201ENST00000510231 177 ntBASIC0.39□□□□□ -2.35
CALR3Q96L12 MIR610-201ENST00000385139 96 ntBASIC0.38□□□□□ -2.35
CALR3Q96L12 MIR6734-201ENST00000621166 68 ntBASIC0.38□□□□□ -2.35
CALR3Q96L12 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
CALR3Q96L12 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
CALR3Q96L12 Y_RNA.226-201ENST00000364337 114 ntBASIC0.37□□□□□ -2.35
CALR3Q96L12 SNORD116-24-201ENST00000384549 92 ntBASIC0.37□□□□□ -2.35
CALR3Q96L12 RNA5SP247-201ENST00000411181 105 ntBASIC0.37□□□□□ -2.35
CALR3Q96L12 RNU6-539P-201ENST00000516665 103 ntBASIC0.37□□□□□ -2.35
CALR3Q96L12 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.37□□□□□ -2.35
CALR3Q96L12 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.35□□□□□ -2.35
CALR3Q96L12 SNORD115-25-201ENST00000362619 82 ntBASIC0.34□□□□□ -2.36
CALR3Q96L12 RNU6-42P-201ENST00000384165 107 ntBASIC0.34□□□□□ -2.36
CALR3Q96L12 MIR548H2-201ENST00000408874 88 ntBASIC0.34□□□□□ -2.36
CALR3Q96L12 MIR4743-201ENST00000584576 69 ntBASIC0.34□□□□□ -2.36
CALR3Q96L12 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
CALR3Q96L12 MIR6514-201ENST00000622549 70 ntBASIC0.34□□□□□ -2.36
CALR3Q96L12 RNA5SP98-201ENST00000363158 137 ntBASIC0.33□□□□□ -2.36
CALR3Q96L12 SNORA42.1-201ENST00000363515 137 ntBASIC0.33□□□□□ -2.36
CALR3Q96L12 AC243829.3-201ENST00000622177 108 ntBASIC0.33□□□□□ -2.36
CALR3Q96L12 CR383656.4-201ENST00000546909 122 ntBASIC0.32□□□□□ -2.36
CALR3Q96L12 AC104408.1-201ENST00000605241 170 ntBASIC0.32□□□□□ -2.36
CALR3Q96L12 MIR6773-201ENST00000612812 74 ntBASIC0.32□□□□□ -2.36
CALR3Q96L12 RNA5SP163-201ENST00000410304 99 ntBASIC0.31□□□□□ -2.36
CALR3Q96L12 RNU6-1089P-201ENST00000516473 104 ntBASIC0.31□□□□□ -2.36
CALR3Q96L12 U6.111-201ENST00000636093 83 ntBASIC0.31□□□□□ -2.36
CALR3Q96L12 RNA5SP214-201ENST00000363378 118 ntBASIC0.3□□□□□ -2.36
CALR3Q96L12 Y_RNA.443-201ENST00000384135 111 ntBASIC0.3□□□□□ -2.36
CALR3Q96L12 RNU6-630P-201ENST00000391258 106 ntBASIC0.3□□□□□ -2.36
CALR3Q96L12 RNU6-180P-201ENST00000516697 61 ntBASIC0.3□□□□□ -2.36
CALR3Q96L12 CYP3A54P-201ENST00000566950 75 ntBASIC0.3□□□□□ -2.36
CALR3Q96L12 MIR593-201ENST00000384856 100 ntBASIC0.29□□□□□ -2.36
CALR3Q96L12 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
CALR3Q96L12 RNU6-502P-201ENST00000362419 108 ntBASIC0.28□□□□□ -2.36
CALR3Q96L12 MIR548C-201ENST00000384815 97 ntBASIC0.28□□□□□ -2.36
CALR3Q96L12 RNU6-337P-201ENST00000391243 106 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 291.7 ms