Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 SNORD124-201ENST00000459577 104 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 CYP3A137P-201ENST00000562436 69 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.97□□□□□ -2.25
CHFRQ96EP1 MIR6828-201ENST00000636181 60 ntBASIC0.97□□□□□ -2.25
CHFRQ96EP1 SNORD114-26-201ENST00000363543 72 ntBASIC0.96□□□□□ -2.26
CHFRQ96EP1 SNORD114-4-201ENST00000363962 75 ntBASIC0.96□□□□□ -2.26
CHFRQ96EP1 RNU6-1184P-201ENST00000384588 108 ntBASIC0.96□□□□□ -2.26
CHFRQ96EP1 MIR548C-201ENST00000384815 97 ntBASIC0.96□□□□□ -2.26
CHFRQ96EP1 MIR652-201ENST00000385278 98 ntBASIC0.96□□□□□ -2.26
CHFRQ96EP1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CHFRQ96EP1 AC021146.9-201ENST00000512503 156 ntBASIC0.96□□□□□ -2.26
CHFRQ96EP1 MIR548AE1-201ENST00000583292 70 ntBASIC0.96□□□□□ -2.26
CHFRQ96EP1 SNORA36.1-201ENST00000363424 132 ntBASIC0.95□□□□□ -2.26
CHFRQ96EP1 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
CHFRQ96EP1 MIR6779-201ENST00000617283 64 ntBASIC0.95□□□□□ -2.26
CHFRQ96EP1 RNU6-1312P-201ENST00000362425 108 ntBASIC0.94□□□□□ -2.26
CHFRQ96EP1 Y_RNA.125-201ENST00000363371 111 ntBASIC0.94□□□□□ -2.26
CHFRQ96EP1 RNU6-698P-201ENST00000363523 107 ntBASIC0.94□□□□□ -2.26
CHFRQ96EP1 RNU6-34P-201ENST00000364874 107 ntBASIC0.94□□□□□ -2.26
CHFRQ96EP1 MIR517B-201ENST00000385102 67 ntBASIC0.94□□□□□ -2.26
CHFRQ96EP1 RNU6-808P-201ENST00000391233 108 ntBASIC0.93□□□□□ -2.26
CHFRQ96EP1 MIR548E-201ENST00000408287 88 ntBASIC0.93□□□□□ -2.26
CHFRQ96EP1 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
CHFRQ96EP1 SCARNA17.3-201ENST00000516381 125 ntBASIC0.93□□□□□ -2.26
CHFRQ96EP1 SNORA15B-2-201ENST00000384058 135 ntBASIC0.92□□□□□ -2.26
CHFRQ96EP1 SNORA15B-1-201ENST00000384334 135 ntBASIC0.92□□□□□ -2.26
CHFRQ96EP1 SNORD113-2-201ENST00000391082 72 ntBASIC0.92□□□□□ -2.26
CHFRQ96EP1 SNORA63.6-201ENST00000364921 119 ntBASIC0.91□□□□□ -2.26
CHFRQ96EP1 Y_RNA.407-201ENST00000383986 113 ntBASIC0.91□□□□□ -2.26
CHFRQ96EP1 SNORA41B-201ENST00000384785 128 ntBASIC0.91□□□□□ -2.26
CHFRQ96EP1 RNU6-1246P-201ENST00000391064 107 ntBASIC0.91□□□□□ -2.26
CHFRQ96EP1 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
CHFRQ96EP1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
CHFRQ96EP1 MIR18A-201ENST00000362310 71 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 RNA5SP325-201ENST00000363756 130 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 Y_RNA.325-201ENST00000365171 122 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 RNA5SP227-201ENST00000516184 113 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 AC025627.3-201ENST00000582078 182 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 MIR4473-201ENST00000583731 91 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 MIR548AD-201ENST00000584780 82 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 MIR7107-201ENST00000611489 80 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 AC090617.8-201ENST00000623339 167 ntBASIC0.9□□□□□ -2.27
CHFRQ96EP1 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
CHFRQ96EP1 SNORA70.25-201ENST00000612741 95 ntBASIC0.89□□□□□ -2.27
CHFRQ96EP1 SNORD110-201ENST00000408189 75 ntBASIC0.88□□□□□ -2.27
CHFRQ96EP1 RNA5SP255-201ENST00000516370 107 ntBASIC0.88□□□□□ -2.27
CHFRQ96EP1 RNA5SP268-201ENST00000516828 124 ntBASIC0.88□□□□□ -2.27
CHFRQ96EP1 RNU1-29P-201ENST00000606574 126 ntBASIC0.88□□□□□ -2.27
CHFRQ96EP1 uc_338.10-201ENST00000621872 182 ntBASIC0.88□□□□□ -2.27
CHFRQ96EP1 Y_RNA.246-201ENST00000364495 108 ntBASIC0.87□□□□□ -2.27
CHFRQ96EP1 SNORD99-201ENST00000408612 74 ntBASIC0.87□□□□□ -2.27
CHFRQ96EP1 AC006210.1-201ENST00000424882 111 ntBASIC0.87□□□□□ -2.27
CHFRQ96EP1 RNA5SP94-201ENST00000516917 108 ntBASIC0.87□□□□□ -2.27
CHFRQ96EP1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.87□□□□□ -2.27
CHFRQ96EP1 CYP3A54P-201ENST00000566950 75 ntBASIC0.87□□□□□ -2.27
CHFRQ96EP1 AC011195.1-201ENST00000578177 177 ntBASIC0.87□□□□□ -2.27
CHFRQ96EP1 MIR4752-201ENST00000579672 72 ntBASIC0.87□□□□□ -2.27
CHFRQ96EP1 SNORA9.1-201ENST00000362412 131 ntBASIC0.86□□□□□ -2.27
CHFRQ96EP1 MIR516B1-201ENST00000385211 90 ntBASIC0.86□□□□□ -2.27
CHFRQ96EP1 RNU4-88P-201ENST00000411220 86 ntBASIC0.86□□□□□ -2.27
CHFRQ96EP1 HMGN2P22-201ENST00000427588 175 ntBASIC0.86□□□□□ -2.27
CHFRQ96EP1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.86□□□□□ -2.27
CHFRQ96EP1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CHFRQ96EP1 RNU6-520P-201ENST00000384717 104 ntBASIC0.85□□□□□ -2.27
CHFRQ96EP1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
CHFRQ96EP1 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
CHFRQ96EP1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
CHFRQ96EP1 MIR548AG1-201ENST00000579932 66 ntBASIC0.84□□□□□ -2.27
CHFRQ96EP1 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
CHFRQ96EP1 RNU6-231P-201ENST00000517122 103 ntBASIC0.83□□□□□ -2.28
CHFRQ96EP1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CHFRQ96EP1 RNY1P8-201ENST00000383970 114 ntBASIC0.82□□□□□ -2.28
CHFRQ96EP1 RNU6-980P-201ENST00000516925 103 ntBASIC0.82□□□□□ -2.28
CHFRQ96EP1 U6.96-201ENST00000636425 70 ntBASIC0.82□□□□□ -2.28
CHFRQ96EP1 RNU6-753P-201ENST00000363926 107 ntBASIC0.81□□□□□ -2.28
CHFRQ96EP1 Y_RNA.379-201ENST00000365653 102 ntBASIC0.81□□□□□ -2.28
CHFRQ96EP1 MIR519A2-201ENST00000384990 87 ntBASIC0.81□□□□□ -2.28
CHFRQ96EP1 RNU6-518P-201ENST00000516056 96 ntBASIC0.81□□□□□ -2.28
CHFRQ96EP1 AC243829.3-201ENST00000622177 108 ntBASIC0.81□□□□□ -2.28
CHFRQ96EP1 Y_RNA.74-201ENST00000362911 99 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 Y_RNA.282-201ENST00000364793 102 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 SNORD116-16-201ENST00000384533 92 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 MIR216A-201ENST00000385063 110 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 RNU6-337P-201ENST00000391243 106 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 MIR1255B2-201ENST00000408618 67 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 AL021921.1-201ENST00000442774 93 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 SNORA40.16-201ENST00000517238 121 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 RN7SL793P-201ENST00000583259 296 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 AC243829.6-201ENST00000612652 106 ntBASIC0.8□□□□□ -2.28
CHFRQ96EP1 RNA5SP517-201ENST00000364724 117 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 SNORA49-201ENST00000386157 136 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 AC069271.1-201ENST00000445577 156 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
CHFRQ96EP1 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
CHFRQ96EP1 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms