Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AP001180.6-201ENST00000584918 159 ntBASIC-0.06□□□□□ -2.42
TRIM43Q96BQ3 IGLL4P-201ENST00000614590 133 ntBASIC-0.06□□□□□ -2.42
TRIM43Q96BQ3 RNU6-208P-201ENST00000362431 107 ntBASIC-0.07□□□□□ -2.42
TRIM43Q96BQ3 SNORD77.2-201ENST00000391045 68 ntBASIC-0.07□□□□□ -2.42
TRIM43Q96BQ3 SNORD2-201ENST00000459163 69 ntBASIC-0.07□□□□□ -2.42
TRIM43Q96BQ3 AC104692.1-201ENST00000472406 90 ntBASIC-0.07□□□□□ -2.42
TRIM43Q96BQ3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
TRIM43Q96BQ3 RNA5SP98-201ENST00000363158 137 ntBASIC-0.08□□□□□ -2.42
TRIM43Q96BQ3 RNU6-824P-201ENST00000363724 104 ntBASIC-0.08□□□□□ -2.42
TRIM43Q96BQ3 RNU6-382P-201ENST00000365181 106 ntBASIC-0.08□□□□□ -2.42
TRIM43Q96BQ3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.08□□□□□ -2.42
TRIM43Q96BQ3 MIR106A-201ENST00000384870 81 ntBASIC-0.08□□□□□ -2.42
TRIM43Q96BQ3 RNU6-274P-201ENST00000459566 107 ntBASIC-0.08□□□□□ -2.42
TRIM43Q96BQ3 RNU6-175P-201ENST00000516896 107 ntBASIC-0.08□□□□□ -2.42
TRIM43Q96BQ3 RNY1P1-201ENST00000364372 112 ntBASIC-0.09□□□□□ -2.42
TRIM43Q96BQ3 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.09□□□□□ -2.42
TRIM43Q96BQ3 RNU6-497P-201ENST00000365316 104 ntBASIC-0.09□□□□□ -2.42
TRIM43Q96BQ3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.09□□□□□ -2.42
TRIM43Q96BQ3 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.09□□□□□ -2.42
TRIM43Q96BQ3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.09□□□□□ -2.42
TRIM43Q96BQ3 RNU6-294P-201ENST00000364999 102 ntBASIC-0.1□□□□□ -2.43
TRIM43Q96BQ3 AC140658.3-201ENST00000567603 271 ntBASIC-0.1□□□□□ -2.43
TRIM43Q96BQ3 U6.81-201ENST00000612550 106 ntBASIC-0.1□□□□□ -2.43
TRIM43Q96BQ3 RNU6-592P-201ENST00000411333 103 ntBASIC-0.11□□□□□ -2.43
TRIM43Q96BQ3 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.11□□□□□ -2.43
TRIM43Q96BQ3 MIR5582-201ENST00000579697 68 ntBASIC-0.11□□□□□ -2.43
TRIM43Q96BQ3 MIR1295B-201ENST00000636144 60 ntBASIC-0.11□□□□□ -2.43
TRIM43Q96BQ3 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.12□□□□□ -2.43
TRIM43Q96BQ3 MIR214-201ENST00000385214 110 ntBASIC-0.12□□□□□ -2.43
TRIM43Q96BQ3 MIR548E-201ENST00000408287 88 ntBASIC-0.12□□□□□ -2.43
TRIM43Q96BQ3 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.12□□□□□ -2.43
TRIM43Q96BQ3 RNU6-681P-201ENST00000364012 104 ntBASIC-0.13□□□□□ -2.43
TRIM43Q96BQ3 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.13□□□□□ -2.43
TRIM43Q96BQ3 MIR582-201ENST00000365731 98 ntBASIC-0.13□□□□□ -2.43
TRIM43Q96BQ3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.13□□□□□ -2.43
TRIM43Q96BQ3 AC006160.2-201ENST00000637708 154 ntBASIC-0.13□□□□□ -2.43
TRIM43Q96BQ3 RNU6-624P-201ENST00000363411 107 ntBASIC-0.14□□□□□ -2.43
TRIM43Q96BQ3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.14□□□□□ -2.43
TRIM43Q96BQ3 MIR604-201ENST00000384880 94 ntBASIC-0.14□□□□□ -2.43
TRIM43Q96BQ3 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.14□□□□□ -2.43
TRIM43Q96BQ3 AL691482.2-201ENST00000457453 84 ntBASIC-0.14□□□□□ -2.43
TRIM43Q96BQ3 RNA5SP170-201ENST00000517150 101 ntBASIC-0.14□□□□□ -2.43
TRIM43Q96BQ3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.14□□□□□ -2.43
TRIM43Q96BQ3 SNORD95.1-201ENST00000364099 68 ntBASIC-0.15□□□□□ -2.43
TRIM43Q96BQ3 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.15□□□□□ -2.43
TRIM43Q96BQ3 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.16□□□□□ -2.44
TRIM43Q96BQ3 SNORA63.6-201ENST00000364921 119 ntBASIC-0.16□□□□□ -2.44
TRIM43Q96BQ3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
TRIM43Q96BQ3 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.16□□□□□ -2.44
TRIM43Q96BQ3 AC108676.2-201ENST00000605225 163 ntBASIC-0.16□□□□□ -2.44
TRIM43Q96BQ3 MIR6509-201ENST00000614603 85 ntBASIC-0.16□□□□□ -2.44
TRIM43Q96BQ3 MIR101-1-201ENST00000362265 75 ntBASIC-0.17□□□□□ -2.44
TRIM43Q96BQ3 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.17□□□□□ -2.44
TRIM43Q96BQ3 RNU6-340P-201ENST00000364005 107 ntBASIC-0.17□□□□□ -2.44
TRIM43Q96BQ3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.17□□□□□ -2.44
TRIM43Q96BQ3 RNU6-990P-201ENST00000364385 104 ntBASIC-0.17□□□□□ -2.44
TRIM43Q96BQ3 RNU6-752P-201ENST00000516376 102 ntBASIC-0.17□□□□□ -2.44
TRIM43Q96BQ3 YWHAEP3-201ENST00000582767 121 ntBASIC-0.17□□□□□ -2.44
TRIM43Q96BQ3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.18□□□□□ -2.44
TRIM43Q96BQ3 MIR450A2-201ENST00000385022 100 ntBASIC-0.18□□□□□ -2.44
TRIM43Q96BQ3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.18□□□□□ -2.44
TRIM43Q96BQ3 RNU6-557P-201ENST00000516842 110 ntBASIC-0.18□□□□□ -2.44
TRIM43Q96BQ3 AP000676.1-201ENST00000533307 52 ntBASIC-0.18□□□□□ -2.44
TRIM43Q96BQ3 MIR5588-201ENST00000581890 63 ntBASIC-0.18□□□□□ -2.44
TRIM43Q96BQ3 MIR4645-201ENST00000583158 77 ntBASIC-0.18□□□□□ -2.44
TRIM43Q96BQ3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.19□□□□□ -2.44
TRIM43Q96BQ3 RNU6-260P-201ENST00000384092 107 ntBASIC-0.19□□□□□ -2.44
TRIM43Q96BQ3 RNU6-129P-201ENST00000391022 107 ntBASIC-0.19□□□□□ -2.44
TRIM43Q96BQ3 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.19□□□□□ -2.44
TRIM43Q96BQ3 AC021146.9-201ENST00000512503 156 ntBASIC-0.19□□□□□ -2.44
TRIM43Q96BQ3 MIR6507-201ENST00000613630 70 ntBASIC-0.19□□□□□ -2.44
TRIM43Q96BQ3 RNA5SP331-201ENST00000364986 107 ntBASIC-0.2□□□□□ -2.44
TRIM43Q96BQ3 MIR494-201ENST00000349529 81 ntBASIC-0.21□□□□□ -2.44
TRIM43Q96BQ3 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.21□□□□□ -2.44
TRIM43Q96BQ3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.21□□□□□ -2.44
TRIM43Q96BQ3 SNORD49B-201ENST00000365172 72 ntBASIC-0.21□□□□□ -2.44
TRIM43Q96BQ3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.21□□□□□ -2.44
TRIM43Q96BQ3 MIR203A-201ENST00000384836 110 ntBASIC-0.21□□□□□ -2.44
TRIM43Q96BQ3 RNU6-686P-201ENST00000364839 107 ntBASIC-0.22□□□□□ -2.44
TRIM43Q96BQ3 RNU6-242P-201ENST00000384359 107 ntBASIC-0.22□□□□□ -2.44
TRIM43Q96BQ3 SNORA49-201ENST00000386157 136 ntBASIC-0.22□□□□□ -2.44
TRIM43Q96BQ3 RNU6-380P-201ENST00000410207 107 ntBASIC-0.22□□□□□ -2.44
TRIM43Q96BQ3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
TRIM43Q96BQ3 RNU6-979P-201ENST00000383896 107 ntBASIC-0.23□□□□□ -2.45
TRIM43Q96BQ3 AC244250.2-201ENST00000418731 148 ntBASIC-0.23□□□□□ -2.45
TRIM43Q96BQ3 AC022137.1-201ENST00000483735 151 ntBASIC-0.23□□□□□ -2.45
TRIM43Q96BQ3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
TRIM43Q96BQ3 SNORA2.1-201ENST00000363089 137 ntBASIC-0.24□□□□□ -2.45
TRIM43Q96BQ3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.24□□□□□ -2.45
TRIM43Q96BQ3 MIR3657-201ENST00000584818 117 ntBASIC-0.24□□□□□ -2.45
TRIM43Q96BQ3 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.25□□□□□ -2.45
TRIM43Q96BQ3 SNORD4A-201ENST00000459174 72 ntBASIC-0.25□□□□□ -2.45
TRIM43Q96BQ3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.25□□□□□ -2.45
TRIM43Q96BQ3 RNA5SP147-201ENST00000516493 109 ntBASIC-0.25□□□□□ -2.45
TRIM43Q96BQ3 MIR409-201ENST00000362237 79 ntBASIC-0.26□□□□□ -2.45
TRIM43Q96BQ3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.26□□□□□ -2.45
TRIM43Q96BQ3 RNU6-303P-201ENST00000517091 106 ntBASIC-0.26□□□□□ -2.45
TRIM43Q96BQ3 MIR4263-201ENST00000584745 83 ntBASIC-0.26□□□□□ -2.45
TRIM43Q96BQ3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRIM43Q96BQ3 RNU6-820P-201ENST00000384273 107 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms