Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RNU6-776P-201ENST00000364403 104 ntBASIC0.47□□□□□ -2.33
SH3RF2Q8TEC5 RNU6-1022P-201ENST00000365049 104 ntBASIC0.47□□□□□ -2.33
SH3RF2Q8TEC5 RNU6-411P-201ENST00000384451 107 ntBASIC0.47□□□□□ -2.33
SH3RF2Q8TEC5 RNU6-70P-201ENST00000516438 60 ntBASIC0.47□□□□□ -2.33
SH3RF2Q8TEC5 MIR4677-201ENST00000584153 80 ntBASIC0.47□□□□□ -2.33
SH3RF2Q8TEC5 MIR548AD-201ENST00000584780 82 ntBASIC0.47□□□□□ -2.33
SH3RF2Q8TEC5 MIR103A1-201ENST00000362165 78 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 MIR330-201ENST00000362196 94 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 RNU6-330P-201ENST00000363015 107 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 SNORA2.1-201ENST00000363089 137 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 SNORD114-29-201ENST00000364819 70 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 MIR516B1-201ENST00000385211 90 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 MIR501-201ENST00000390204 84 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 RNU7-129P-201ENST00000516128 62 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
SH3RF2Q8TEC5 Y_RNA.250-201ENST00000364542 110 ntBASIC0.45□□□□□ -2.34
SH3RF2Q8TEC5 AC244090.1-201ENST00000441884 93 ntBASIC0.45□□□□□ -2.34
SH3RF2Q8TEC5 SNORD2-201ENST00000459163 69 ntBASIC0.45□□□□□ -2.34
SH3RF2Q8TEC5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.45□□□□□ -2.34
SH3RF2Q8TEC5 RNA5SP330-201ENST00000517096 96 ntBASIC0.45□□□□□ -2.34
SH3RF2Q8TEC5 MIR3657-201ENST00000584818 117 ntBASIC0.45□□□□□ -2.34
SH3RF2Q8TEC5 MIR8053-201ENST00000613344 75 ntBASIC0.45□□□□□ -2.34
SH3RF2Q8TEC5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.44□□□□□ -2.34
SH3RF2Q8TEC5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
SH3RF2Q8TEC5 AC073261.1-201ENST00000429409 121 ntBASIC0.44□□□□□ -2.34
SH3RF2Q8TEC5 MIR3134-201ENST00000579433 74 ntBASIC0.44□□□□□ -2.34
SH3RF2Q8TEC5 MIR8087-201ENST00000612745 78 ntBASIC0.44□□□□□ -2.34
SH3RF2Q8TEC5 AC084368.1-201ENST00000620935 65 ntBASIC0.44□□□□□ -2.34
SH3RF2Q8TEC5 RNA5SP62-201ENST00000363457 110 ntBASIC0.43□□□□□ -2.34
SH3RF2Q8TEC5 RNU6-1296P-201ENST00000383879 107 ntBASIC0.43□□□□□ -2.34
SH3RF2Q8TEC5 Y_RNA.545-201ENST00000384652 105 ntBASIC0.43□□□□□ -2.34
SH3RF2Q8TEC5 MIR203A-201ENST00000384836 110 ntBASIC0.43□□□□□ -2.34
SH3RF2Q8TEC5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.42□□□□□ -2.34
SH3RF2Q8TEC5 Y_RNA.788-201ENST00000622394 112 ntBASIC0.42□□□□□ -2.34
SH3RF2Q8TEC5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
SH3RF2Q8TEC5 SNORD45.1-201ENST00000363181 77 ntBASIC0.41□□□□□ -2.34
SH3RF2Q8TEC5 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
SH3RF2Q8TEC5 RNU6-587P-201ENST00000391282 106 ntBASIC0.41□□□□□ -2.34
SH3RF2Q8TEC5 MIR499B-201ENST00000636498 73 ntBASIC0.41□□□□□ -2.34
SH3RF2Q8TEC5 RNU6-990P-201ENST00000364385 104 ntBASIC0.4□□□□□ -2.35
SH3RF2Q8TEC5 SNORA75.1-201ENST00000391130 148 ntBASIC0.4□□□□□ -2.35
SH3RF2Q8TEC5 AC069113.3-201ENST00000521019 150 ntBASIC0.4□□□□□ -2.35
SH3RF2Q8TEC5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.4□□□□□ -2.35
SH3RF2Q8TEC5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SH3RF2Q8TEC5 SNORA63.6-201ENST00000364921 119 ntBASIC0.39□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-815P-201ENST00000384080 113 ntBASIC0.39□□□□□ -2.35
SH3RF2Q8TEC5 MIR154-201ENST00000385243 84 ntBASIC0.39□□□□□ -2.35
SH3RF2Q8TEC5 AL109933.3-201ENST00000619095 188 ntBASIC0.39□□□□□ -2.35
SH3RF2Q8TEC5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.38□□□□□ -2.35
SH3RF2Q8TEC5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.38□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-1241P-201ENST00000384536 107 ntBASIC0.38□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-871P-201ENST00000516122 100 ntBASIC0.38□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-782P-201ENST00000516852 104 ntBASIC0.38□□□□□ -2.35
SH3RF2Q8TEC5 RNU7-188P-201ENST00000517063 64 ntBASIC0.38□□□□□ -2.35
SH3RF2Q8TEC5 MIR664A-201ENST00000626086 82 ntBASIC0.38□□□□□ -2.35
SH3RF2Q8TEC5 SNORA15B-2-201ENST00000384058 135 ntBASIC0.37□□□□□ -2.35
SH3RF2Q8TEC5 SNORA15B-1-201ENST00000384334 135 ntBASIC0.37□□□□□ -2.35
SH3RF2Q8TEC5 MIR876-201ENST00000401147 81 ntBASIC0.37□□□□□ -2.35
SH3RF2Q8TEC5 MIR889-201ENST00000401280 79 ntBASIC0.37□□□□□ -2.35
SH3RF2Q8TEC5 AC021146.9-201ENST00000512503 156 ntBASIC0.37□□□□□ -2.35
SH3RF2Q8TEC5 MIR4315-1-201ENST00000636800 73 ntBASIC0.37□□□□□ -2.35
SH3RF2Q8TEC5 MIR4315-2-201ENST00000640925 73 ntBASIC0.37□□□□□ -2.35
SH3RF2Q8TEC5 MIR548E-201ENST00000408287 88 ntBASIC0.36□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-687P-201ENST00000516443 89 ntBASIC0.36□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-1162P-201ENST00000384443 104 ntBASIC0.35□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-127P-201ENST00000390897 107 ntBASIC0.35□□□□□ -2.35
SH3RF2Q8TEC5 RNU6-604P-201ENST00000390917 100 ntBASIC0.35□□□□□ -2.35
SH3RF2Q8TEC5 MIR1197-201ENST00000408818 88 ntBASIC0.35□□□□□ -2.35
SH3RF2Q8TEC5 RNA5SP147-201ENST00000516493 109 ntBASIC0.35□□□□□ -2.35
SH3RF2Q8TEC5 MIR3925-201ENST00000584674 77 ntBASIC0.35□□□□□ -2.35
SH3RF2Q8TEC5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.35□□□□□ -2.35
SH3RF2Q8TEC5 MIR892B-201ENST00000401279 77 ntBASIC0.34□□□□□ -2.36
SH3RF2Q8TEC5 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
SH3RF2Q8TEC5 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
SH3RF2Q8TEC5 RNU6-1015P-201ENST00000517121 99 ntBASIC0.34□□□□□ -2.36
SH3RF2Q8TEC5 SCARNA11.2-201ENST00000517183 154 ntBASIC0.34□□□□□ -2.36
SH3RF2Q8TEC5 MIR6739-201ENST00000622461 75 ntBASIC0.34□□□□□ -2.36
SH3RF2Q8TEC5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
SH3RF2Q8TEC5 SNORD115-22-201ENST00000364456 82 ntBASIC0.32□□□□□ -2.36
SH3RF2Q8TEC5 MIR582-201ENST00000365731 98 ntBASIC0.32□□□□□ -2.36
SH3RF2Q8TEC5 RNU6-634P-201ENST00000459134 106 ntBASIC0.32□□□□□ -2.36
SH3RF2Q8TEC5 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
SH3RF2Q8TEC5 SNORA40.17-201ENST00000517256 115 ntBASIC0.32□□□□□ -2.36
SH3RF2Q8TEC5 RNU6-895P-201ENST00000384125 103 ntBASIC0.31□□□□□ -2.36
SH3RF2Q8TEC5 Y_RNA.565-201ENST00000384719 101 ntBASIC0.31□□□□□ -2.36
SH3RF2Q8TEC5 MIR521-2-201ENST00000384818 87 ntBASIC0.31□□□□□ -2.36
SH3RF2Q8TEC5 Y_RNA.633-201ENST00000459107 95 ntBASIC0.31□□□□□ -2.36
SH3RF2Q8TEC5 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
SH3RF2Q8TEC5 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
SH3RF2Q8TEC5 MTND4LP1-201ENST00000446263 157 ntBASIC0.3□□□□□ -2.36
SH3RF2Q8TEC5 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.3□□□□□ -2.36
SH3RF2Q8TEC5 MIR4743-201ENST00000584576 69 ntBASIC0.3□□□□□ -2.36
SH3RF2Q8TEC5 RNA5SP257-201ENST00000363023 116 ntBASIC0.29□□□□□ -2.36
SH3RF2Q8TEC5 MIR610-201ENST00000385139 96 ntBASIC0.29□□□□□ -2.36
SH3RF2Q8TEC5 snoU13.13-201ENST00000458842 104 ntBASIC0.29□□□□□ -2.36
SH3RF2Q8TEC5 RNU6-523P-201ENST00000516304 54 ntBASIC0.29□□□□□ -2.36
SH3RF2Q8TEC5 RNU6-881P-201ENST00000516813 102 ntBASIC0.29□□□□□ -2.36
SH3RF2Q8TEC5 RNU6-175P-201ENST00000516896 107 ntBASIC0.29□□□□□ -2.36
SH3RF2Q8TEC5 SNORD113.1-201ENST00000363280 73 ntBASIC0.28□□□□□ -2.36
SH3RF2Q8TEC5 RNU6-645P-201ENST00000364649 106 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 268.9 ms