Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNU6-810P-201ENST00000364001 107 ntBASIC1.73□□□□□ -2.13
NKX2-3Q8TAU0 AC243829.3-201ENST00000622177 108 ntBASIC1.73□□□□□ -2.13
NKX2-3Q8TAU0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
NKX2-3Q8TAU0 SNORD89-201ENST00000390981 114 ntBASIC1.72□□□□□ -2.13
NKX2-3Q8TAU0 RNU6-419P-201ENST00000517030 63 ntBASIC1.72□□□□□ -2.13
NKX2-3Q8TAU0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.72□□□□□ -2.13
NKX2-3Q8TAU0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.72□□□□□ -2.13
NKX2-3Q8TAU0 RNU6-247P-201ENST00000362636 107 ntBASIC1.71□□□□□ -2.14
NKX2-3Q8TAU0 MIR573-201ENST00000384964 99 ntBASIC1.71□□□□□ -2.14
NKX2-3Q8TAU0 MIR519A2-201ENST00000384990 87 ntBASIC1.71□□□□□ -2.14
NKX2-3Q8TAU0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.71□□□□□ -2.14
NKX2-3Q8TAU0 AC243829.6-201ENST00000612652 106 ntBASIC1.71□□□□□ -2.14
NKX2-3Q8TAU0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NKX2-3Q8TAU0 MIR598-201ENST00000384868 97 ntBASIC1.7□□□□□ -2.14
NKX2-3Q8TAU0 SNORD110-201ENST00000408189 75 ntBASIC1.7□□□□□ -2.14
NKX2-3Q8TAU0 AC006210.1-201ENST00000424882 111 ntBASIC1.7□□□□□ -2.14
NKX2-3Q8TAU0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.7□□□□□ -2.14
NKX2-3Q8TAU0 MIR3612-201ENST00000579753 87 ntBASIC1.7□□□□□ -2.14
NKX2-3Q8TAU0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
NKX2-3Q8TAU0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
NKX2-3Q8TAU0 MIR1255B2-201ENST00000408618 67 ntBASIC1.68□□□□□ -2.14
NKX2-3Q8TAU0 AC090617.8-201ENST00000623339 167 ntBASIC1.68□□□□□ -2.14
NKX2-3Q8TAU0 SNORD1B-201ENST00000363091 84 ntBASIC1.67□□□□□ -2.14
NKX2-3Q8TAU0 RNU6-172P-201ENST00000411000 93 ntBASIC1.67□□□□□ -2.14
NKX2-3Q8TAU0 MIR4490-201ENST00000582647 84 ntBASIC1.67□□□□□ -2.14
NKX2-3Q8TAU0 RNU1-93P-201ENST00000364704 169 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 SNORA25-201ENST00000384384 134 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 MIR222-201ENST00000384992 110 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 AC244090.1-201ENST00000441884 93 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 SNORD2-201ENST00000459163 69 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 RNA5SP227-201ENST00000516184 113 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 RNU7-154P-201ENST00000516194 62 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 MIR4473-201ENST00000583731 91 ntBASIC1.66□□□□□ -2.14
NKX2-3Q8TAU0 MIR429-201ENST00000362106 83 ntBASIC1.65□□□□□ -2.15
NKX2-3Q8TAU0 MIR96-201ENST00000362288 78 ntBASIC1.65□□□□□ -2.15
NKX2-3Q8TAU0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
NKX2-3Q8TAU0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.65□□□□□ -2.15
NKX2-3Q8TAU0 AC068338.1-201ENST00000565567 176 ntBASIC1.65□□□□□ -2.15
NKX2-3Q8TAU0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
NKX2-3Q8TAU0 SNORD26-201ENST00000384147 75 ntBASIC1.64□□□□□ -2.15
NKX2-3Q8TAU0 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
NKX2-3Q8TAU0 MIR20A-201ENST00000362279 71 ntBASIC1.63□□□□□ -2.15
NKX2-3Q8TAU0 MIR19B1-201ENST00000384829 87 ntBASIC1.63□□□□□ -2.15
NKX2-3Q8TAU0 RNU7-160P-201ENST00000516660 62 ntBASIC1.63□□□□□ -2.15
NKX2-3Q8TAU0 AC025627.3-201ENST00000582078 182 ntBASIC1.63□□□□□ -2.15
NKX2-3Q8TAU0 MIR151B-201ENST00000584249 96 ntBASIC1.63□□□□□ -2.15
NKX2-3Q8TAU0 RNU6-1250P-201ENST00000391218 107 ntBASIC1.62□□□□□ -2.15
NKX2-3Q8TAU0 RNA5SP470-201ENST00000516463 106 ntBASIC1.62□□□□□ -2.15
NKX2-3Q8TAU0 MIR6788-201ENST00000618842 66 ntBASIC1.62□□□□□ -2.15
NKX2-3Q8TAU0 RNA5SP327-201ENST00000362494 101 ntBASIC1.61□□□□□ -2.15
NKX2-3Q8TAU0 Y_RNA.109-201ENST00000363215 102 ntBASIC1.61□□□□□ -2.15
NKX2-3Q8TAU0 MIR520E-201ENST00000384867 87 ntBASIC1.61□□□□□ -2.15
NKX2-3Q8TAU0 MIR200A-201ENST00000384875 90 ntBASIC1.61□□□□□ -2.15
NKX2-3Q8TAU0 RNA5SP268-201ENST00000516828 124 ntBASIC1.61□□□□□ -2.15
NKX2-3Q8TAU0 Y_RNA.30-201ENST00000362572 97 ntBASIC1.6□□□□□ -2.15
NKX2-3Q8TAU0 SNORA36.1-201ENST00000363424 132 ntBASIC1.6□□□□□ -2.15
NKX2-3Q8TAU0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
NKX2-3Q8TAU0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.59□□□□□ -2.15
NKX2-3Q8TAU0 RNU4-45P-201ENST00000365469 141 ntBASIC1.59□□□□□ -2.15
NKX2-3Q8TAU0 RPS29P1-201ENST00000465274 159 ntBASIC1.59□□□□□ -2.15
NKX2-3Q8TAU0 SNORD115-25-201ENST00000362619 82 ntBASIC1.58□□□□□ -2.16
NKX2-3Q8TAU0 RNU6-696P-201ENST00000390834 107 ntBASIC1.58□□□□□ -2.16
NKX2-3Q8TAU0 RNU6-337P-201ENST00000391243 106 ntBASIC1.58□□□□□ -2.16
NKX2-3Q8TAU0 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
NKX2-3Q8TAU0 MIR548AG1-201ENST00000579932 66 ntBASIC1.58□□□□□ -2.16
NKX2-3Q8TAU0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NKX2-3Q8TAU0 MIR5706-201ENST00000579841 80 ntBASIC1.57□□□□□ -2.16
NKX2-3Q8TAU0 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
NKX2-3Q8TAU0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.57□□□□□ -2.16
NKX2-3Q8TAU0 MIR18A-201ENST00000362310 71 ntBASIC1.56□□□□□ -2.16
NKX2-3Q8TAU0 RNU6-1206P-201ENST00000516339 103 ntBASIC1.56□□□□□ -2.16
NKX2-3Q8TAU0 RNU6-924P-201ENST00000362926 108 ntBASIC1.55□□□□□ -2.16
NKX2-3Q8TAU0 Y_RNA.433-201ENST00000384089 102 ntBASIC1.55□□□□□ -2.16
NKX2-3Q8TAU0 RNU6-458P-201ENST00000384179 107 ntBASIC1.55□□□□□ -2.16
NKX2-3Q8TAU0 MIR548J-201ENST00000408833 112 ntBASIC1.55□□□□□ -2.16
NKX2-3Q8TAU0 MIR6773-201ENST00000612812 74 ntBASIC1.55□□□□□ -2.16
NKX2-3Q8TAU0 U6.58-201ENST00000613107 107 ntBASIC1.55□□□□□ -2.16
NKX2-3Q8TAU0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NKX2-3Q8TAU0 HMGN2P22-201ENST00000427588 175 ntBASIC1.54□□□□□ -2.16
NKX2-3Q8TAU0 MIR548AL-201ENST00000578416 97 ntBASIC1.54□□□□□ -2.16
NKX2-3Q8TAU0 MIR7107-201ENST00000611489 80 ntBASIC1.54□□□□□ -2.16
NKX2-3Q8TAU0 SNORA70.25-201ENST00000612741 95 ntBASIC1.54□□□□□ -2.16
NKX2-3Q8TAU0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.53□□□□□ -2.16
NKX2-3Q8TAU0 RNU1-124P-201ENST00000363861 145 ntBASIC1.52□□□□□ -2.17
NKX2-3Q8TAU0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
NKX2-3Q8TAU0 RNA5SP94-201ENST00000516917 108 ntBASIC1.51□□□□□ -2.17
NKX2-3Q8TAU0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NKX2-3Q8TAU0 SNORD114-29-201ENST00000364819 70 ntBASIC1.5□□□□□ -2.17
NKX2-3Q8TAU0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.5□□□□□ -2.17
NKX2-3Q8TAU0 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
NKX2-3Q8TAU0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.5□□□□□ -2.17
NKX2-3Q8TAU0 Y_RNA.69-201ENST00000362885 109 ntBASIC1.49□□□□□ -2.17
NKX2-3Q8TAU0 SNORD114-27-201ENST00000363766 70 ntBASIC1.49□□□□□ -2.17
NKX2-3Q8TAU0 SNORD124-201ENST00000459577 104 ntBASIC1.49□□□□□ -2.17
NKX2-3Q8TAU0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
NKX2-3Q8TAU0 MIRLET7B-201ENST00000385140 83 ntBASIC1.48□□□□□ -2.17
NKX2-3Q8TAU0 RNA5SP255-201ENST00000516370 107 ntBASIC1.48□□□□□ -2.17
NKX2-3Q8TAU0 SNORD114-24-201ENST00000365029 72 ntBASIC1.47□□□□□ -2.17
NKX2-3Q8TAU0 RNU6-724P-201ENST00000390958 105 ntBASIC1.47□□□□□ -2.17
NKX2-3Q8TAU0 HAR1A.1-201ENST00000459583 118 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms