Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
NUP43Q8NFH3 AL590095.2-201ENST00000604136 117 ntBASIC0.79□□□□□ -2.28
NUP43Q8NFH3 AL109933.3-201ENST00000619095 188 ntBASIC0.79□□□□□ -2.28
NUP43Q8NFH3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.79□□□□□ -2.28
NUP43Q8NFH3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.79□□□□□ -2.28
NUP43Q8NFH3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.78□□□□□ -2.28
NUP43Q8NFH3 RNU6-471P-201ENST00000383944 106 ntBASIC0.78□□□□□ -2.28
NUP43Q8NFH3 MTND4LP1-201ENST00000446263 157 ntBASIC0.78□□□□□ -2.28
NUP43Q8NFH3 AC125388.1-201ENST00000459631 156 ntBASIC0.78□□□□□ -2.28
NUP43Q8NFH3 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
NUP43Q8NFH3 RNU4-54P-201ENST00000516428 129 ntBASIC0.78□□□□□ -2.28
NUP43Q8NFH3 RNU6-656P-201ENST00000516785 107 ntBASIC0.78□□□□□ -2.28
NUP43Q8NFH3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.77□□□□□ -2.29
NUP43Q8NFH3 MIR582-201ENST00000365731 98 ntBASIC0.77□□□□□ -2.29
NUP43Q8NFH3 MIR548E-201ENST00000408287 88 ntBASIC0.77□□□□□ -2.29
NUP43Q8NFH3 snoU13.13-201ENST00000458842 104 ntBASIC0.77□□□□□ -2.29
NUP43Q8NFH3 RNU6-668P-201ENST00000364180 107 ntBASIC0.76□□□□□ -2.29
NUP43Q8NFH3 MIR518A1-201ENST00000385068 85 ntBASIC0.76□□□□□ -2.29
NUP43Q8NFH3 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
NUP43Q8NFH3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.75□□□□□ -2.29
NUP43Q8NFH3 SNORD71-201ENST00000411292 86 ntBASIC0.75□□□□□ -2.29
NUP43Q8NFH3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.75□□□□□ -2.29
NUP43Q8NFH3 AC021146.9-201ENST00000512503 156 ntBASIC0.75□□□□□ -2.29
NUP43Q8NFH3 MIR924-201ENST00000638017 53 ntBASIC0.75□□□□□ -2.29
NUP43Q8NFH3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.74□□□□□ -2.29
NUP43Q8NFH3 SNORA63.6-201ENST00000364921 119 ntBASIC0.74□□□□□ -2.29
NUP43Q8NFH3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
NUP43Q8NFH3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.74□□□□□ -2.29
NUP43Q8NFH3 MIR6755-201ENST00000619993 66 ntBASIC0.74□□□□□ -2.29
NUP43Q8NFH3 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
NUP43Q8NFH3 uc_338.10-201ENST00000621872 182 ntBASIC0.74□□□□□ -2.29
NUP43Q8NFH3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.74□□□□□ -2.29
NUP43Q8NFH3 SNORA2A-201ENST00000383885 135 ntBASIC0.73□□□□□ -2.29
NUP43Q8NFH3 AC098934.3-201ENST00000430450 190 ntBASIC0.73□□□□□ -2.29
NUP43Q8NFH3 AC010487.4-201ENST00000637027 61 ntBASIC0.73□□□□□ -2.29
NUP43Q8NFH3 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
NUP43Q8NFH3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NUP43Q8NFH3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.72□□□□□ -2.29
NUP43Q8NFH3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.72□□□□□ -2.29
NUP43Q8NFH3 MIR521-2-201ENST00000384818 87 ntBASIC0.72□□□□□ -2.29
NUP43Q8NFH3 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
NUP43Q8NFH3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.29
NUP43Q8NFH3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.71□□□□□ -2.3
NUP43Q8NFH3 SNORD114-23-201ENST00000363536 72 ntBASIC0.71□□□□□ -2.3
NUP43Q8NFH3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.71□□□□□ -2.3
NUP43Q8NFH3 RNU6-229P-201ENST00000516614 102 ntBASIC0.71□□□□□ -2.3
NUP43Q8NFH3 MIR4511-201ENST00000582784 87 ntBASIC0.71□□□□□ -2.3
NUP43Q8NFH3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.7□□□□□ -2.3
NUP43Q8NFH3 AL157398.1-201ENST00000452981 186 ntBASIC0.7□□□□□ -2.3
NUP43Q8NFH3 U7.6-201ENST00000610841 64 ntBASIC0.7□□□□□ -2.3
NUP43Q8NFH3 SNORA33.1-201ENST00000364957 130 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 MIR501-201ENST00000390204 84 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 RNU6-848P-201ENST00000515948 107 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 RNU6-617P-201ENST00000516147 107 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 RNU6-473P-201ENST00000516164 107 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 AC103706.3-201ENST00000636297 85 ntBASIC0.69□□□□□ -2.3
NUP43Q8NFH3 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
NUP43Q8NFH3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.68□□□□□ -2.3
NUP43Q8NFH3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.68□□□□□ -2.3
NUP43Q8NFH3 MIR936-201ENST00000401264 98 ntBASIC0.68□□□□□ -2.3
NUP43Q8NFH3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.68□□□□□ -2.3
NUP43Q8NFH3 MIR4677-201ENST00000584153 80 ntBASIC0.68□□□□□ -2.3
NUP43Q8NFH3 AC244090.1-201ENST00000441884 93 ntBASIC0.67□□□□□ -2.3
NUP43Q8NFH3 MIR20A-201ENST00000362279 71 ntBASIC0.66□□□□□ -2.3
NUP43Q8NFH3 MIR516B1-201ENST00000385211 90 ntBASIC0.66□□□□□ -2.3
NUP43Q8NFH3 RNA5SP330-201ENST00000517096 96 ntBASIC0.66□□□□□ -2.3
NUP43Q8NFH3 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
NUP43Q8NFH3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
NUP43Q8NFH3 RNA5SP215-201ENST00000363440 122 ntBASIC0.65□□□□□ -2.31
NUP43Q8NFH3 MIR146A-201ENST00000385201 99 ntBASIC0.65□□□□□ -2.31
NUP43Q8NFH3 MIR760-201ENST00000390220 80 ntBASIC0.65□□□□□ -2.31
NUP43Q8NFH3 RNU6-542P-201ENST00000516405 103 ntBASIC0.65□□□□□ -2.31
NUP43Q8NFH3 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
NUP43Q8NFH3 RNA5SP257-201ENST00000363023 116 ntBASIC0.64□□□□□ -2.31
NUP43Q8NFH3 SNORD44.1-201ENST00000363202 61 ntBASIC0.64□□□□□ -2.31
NUP43Q8NFH3 MIR9-2-201ENST00000384838 87 ntBASIC0.64□□□□□ -2.31
NUP43Q8NFH3 RNU7-188P-201ENST00000517063 64 ntBASIC0.64□□□□□ -2.31
NUP43Q8NFH3 MIR548AD-201ENST00000584780 82 ntBASIC0.64□□□□□ -2.31
NUP43Q8NFH3 MIR8087-201ENST00000612745 78 ntBASIC0.64□□□□□ -2.31
NUP43Q8NFH3 SNORD114-29-201ENST00000364819 70 ntBASIC0.63□□□□□ -2.31
NUP43Q8NFH3 RNA5SP299-201ENST00000391203 116 ntBASIC0.63□□□□□ -2.31
NUP43Q8NFH3 U2.7-201ENST00000619197 100 ntBASIC0.63□□□□□ -2.31
NUP43Q8NFH3 MIR330-201ENST00000362196 94 ntBASIC0.62□□□□□ -2.31
NUP43Q8NFH3 RNA5SP128-201ENST00000365305 116 ntBASIC0.62□□□□□ -2.31
NUP43Q8NFH3 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
NUP43Q8NFH3 RNU6-175P-201ENST00000516896 107 ntBASIC0.62□□□□□ -2.31
NUP43Q8NFH3 SNORA49-201ENST00000386157 136 ntBASIC0.61□□□□□ -2.31
NUP43Q8NFH3 AC110620.1-201ENST00000416042 228 ntBASIC0.61□□□□□ -2.31
NUP43Q8NFH3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.61□□□□□ -2.31
NUP43Q8NFH3 SNORA68.3-201ENST00000515906 83 ntBASIC0.61□□□□□ -2.31
NUP43Q8NFH3 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
NUP43Q8NFH3 RNU6-669P-201ENST00000365575 107 ntBASIC0.6□□□□□ -2.31
NUP43Q8NFH3 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
NUP43Q8NFH3 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
NUP43Q8NFH3 SCARNA21.1-201ENST00000515996 128 ntBASIC0.59□□□□□ -2.31
NUP43Q8NFH3 RNU7-174P-201ENST00000516248 59 ntBASIC0.59□□□□□ -2.31
NUP43Q8NFH3 MIR3925-201ENST00000584674 77 ntBASIC0.59□□□□□ -2.31
NUP43Q8NFH3 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 244 ms