Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CYP3A54P-201ENST00000566950 75 ntBASIC1.3□□□□□ -2.2
CCDC116Q8IYX3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC116Q8IYX3 Y_RNA.325-201ENST00000365171 122 ntBASIC1.29□□□□□ -2.2
CCDC116Q8IYX3 MIR516B1-201ENST00000385211 90 ntBASIC1.29□□□□□ -2.2
CCDC116Q8IYX3 SNORA9.1-201ENST00000362412 131 ntBASIC1.28□□□□□ -2.2
CCDC116Q8IYX3 RNU6-520P-201ENST00000384717 104 ntBASIC1.28□□□□□ -2.2
CCDC116Q8IYX3 SNORA41B-201ENST00000384785 128 ntBASIC1.28□□□□□ -2.2
CCDC116Q8IYX3 HMGN2P22-201ENST00000427588 175 ntBASIC1.28□□□□□ -2.2
CCDC116Q8IYX3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
CCDC116Q8IYX3 MIR6779-201ENST00000617283 64 ntBASIC1.28□□□□□ -2.2
CCDC116Q8IYX3 RNA5SP325-201ENST00000363756 130 ntBASIC1.27□□□□□ -2.21
CCDC116Q8IYX3 RNU6-1246P-201ENST00000391064 107 ntBASIC1.27□□□□□ -2.21
CCDC116Q8IYX3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC116Q8IYX3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CCDC116Q8IYX3 AL021921.1-201ENST00000442774 93 ntBASIC1.26□□□□□ -2.21
CCDC116Q8IYX3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC116Q8IYX3 RNA5SP102-201ENST00000516865 106 ntBASIC1.26□□□□□ -2.21
CCDC116Q8IYX3 AL353765.1-201ENST00000605514 183 ntBASIC1.26□□□□□ -2.21
CCDC116Q8IYX3 RNU1-29P-201ENST00000606574 126 ntBASIC1.26□□□□□ -2.21
CCDC116Q8IYX3 AC090617.8-201ENST00000623339 167 ntBASIC1.26□□□□□ -2.21
CCDC116Q8IYX3 AC243829.6-201ENST00000612652 106 ntBASIC1.25□□□□□ -2.21
CCDC116Q8IYX3 MIR20A-201ENST00000362279 71 ntBASIC1.24□□□□□ -2.21
CCDC116Q8IYX3 RNY1P8-201ENST00000383970 114 ntBASIC1.24□□□□□ -2.21
CCDC116Q8IYX3 AC244090.1-201ENST00000441884 93 ntBASIC1.24□□□□□ -2.21
CCDC116Q8IYX3 RNU6-518P-201ENST00000516056 96 ntBASIC1.24□□□□□ -2.21
CCDC116Q8IYX3 MIR5706-201ENST00000579841 80 ntBASIC1.24□□□□□ -2.21
CCDC116Q8IYX3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC116Q8IYX3 MIR6515-201ENST00000619843 57 ntBASIC1.23□□□□□ -2.21
CCDC116Q8IYX3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 RNA5SP517-201ENST00000364724 117 ntBASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 SNORA36.2-201ENST00000384004 127 ntBASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 AC069271.1-201ENST00000445577 156 ntBASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 RNU7-119P-201ENST00000459279 63 ntBASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 MIR4421-201ENST00000578133 69 ntBASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 MIR548AD-201ENST00000584780 82 ntBASIC1.22□□□□□ -2.21
CCDC116Q8IYX3 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
CCDC116Q8IYX3 AC243829.3-201ENST00000622177 108 ntBASIC1.21□□□□□ -2.22
CCDC116Q8IYX3 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
CCDC116Q8IYX3 MIR1255B2-201ENST00000408618 67 ntBASIC1.2□□□□□ -2.22
CCDC116Q8IYX3 RNU6-231P-201ENST00000517122 103 ntBASIC1.2□□□□□ -2.22
CCDC116Q8IYX3 SNORA25.18-201ENST00000607153 114 ntBASIC1.2□□□□□ -2.22
CCDC116Q8IYX3 AC022709.1-201ENST00000615967 87 ntBASIC1.2□□□□□ -2.22
CCDC116Q8IYX3 Y_RNA.74-201ENST00000362911 99 ntBASIC1.19□□□□□ -2.22
CCDC116Q8IYX3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC116Q8IYX3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CCDC116Q8IYX3 MIR519A2-201ENST00000384990 87 ntBASIC1.18□□□□□ -2.22
CCDC116Q8IYX3 MIR140-201ENST00000385282 100 ntBASIC1.18□□□□□ -2.22
CCDC116Q8IYX3 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
CCDC116Q8IYX3 SNORD116-16-201ENST00000384533 92 ntBASIC1.17□□□□□ -2.22
CCDC116Q8IYX3 MIR598-201ENST00000384868 97 ntBASIC1.17□□□□□ -2.22
CCDC116Q8IYX3 ACA64.5-201ENST00000516207 127 ntBASIC1.17□□□□□ -2.22
CCDC116Q8IYX3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC116Q8IYX3 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
CCDC116Q8IYX3 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
CCDC116Q8IYX3 SNORD114-29-201ENST00000364819 70 ntBASIC1.16□□□□□ -2.22
CCDC116Q8IYX3 SNORD2-201ENST00000459163 69 ntBASIC1.16□□□□□ -2.22
CCDC116Q8IYX3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.16□□□□□ -2.22
CCDC116Q8IYX3 Y_RNA.374-201ENST00000365606 101 ntBASIC1.15□□□□□ -2.23
CCDC116Q8IYX3 Y_RNA.379-201ENST00000365653 102 ntBASIC1.15□□□□□ -2.23
CCDC116Q8IYX3 MIR527-201ENST00000385244 85 ntBASIC1.15□□□□□ -2.23
CCDC116Q8IYX3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.15□□□□□ -2.23
CCDC116Q8IYX3 Y_RNA.282-201ENST00000364793 102 ntBASIC1.14□□□□□ -2.23
CCDC116Q8IYX3 SNORA2A-201ENST00000383885 135 ntBASIC1.14□□□□□ -2.23
CCDC116Q8IYX3 RNU7-188P-201ENST00000517063 64 ntBASIC1.14□□□□□ -2.23
CCDC116Q8IYX3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.14□□□□□ -2.23
CCDC116Q8IYX3 MIR4661-201ENST00000582720 75 ntBASIC1.14□□□□□ -2.23
CCDC116Q8IYX3 U7.6-201ENST00000610841 64 ntBASIC1.14□□□□□ -2.23
CCDC116Q8IYX3 SNORD118-201ENST00000363593 134 ntBASIC1.13□□□□□ -2.23
CCDC116Q8IYX3 RNU6-337P-201ENST00000391243 106 ntBASIC1.13□□□□□ -2.23
CCDC116Q8IYX3 SNORD116.2-201ENST00000391251 93 ntBASIC1.13□□□□□ -2.23
CCDC116Q8IYX3 RNU6-229P-201ENST00000516614 102 ntBASIC1.13□□□□□ -2.23
CCDC116Q8IYX3 MIR6773-201ENST00000612812 74 ntBASIC1.13□□□□□ -2.23
CCDC116Q8IYX3 SNORA49-201ENST00000386157 136 ntBASIC1.12□□□□□ -2.23
CCDC116Q8IYX3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.12□□□□□ -2.23
CCDC116Q8IYX3 SNORA40.8-201ENST00000411034 126 ntBASIC1.12□□□□□ -2.23
CCDC116Q8IYX3 RNU4-88P-201ENST00000411220 86 ntBASIC1.12□□□□□ -2.23
CCDC116Q8IYX3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.12□□□□□ -2.23
CCDC116Q8IYX3 Y_RNA.423-201ENST00000384057 113 ntBASIC1.11□□□□□ -2.23
CCDC116Q8IYX3 MIR151B-201ENST00000584249 96 ntBASIC1.11□□□□□ -2.23
CCDC116Q8IYX3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC116Q8IYX3 SNORD115-25-201ENST00000362619 82 ntBASIC1.09□□□□□ -2.23
CCDC116Q8IYX3 RNU7-154P-201ENST00000516194 62 ntBASIC1.09□□□□□ -2.23
CCDC116Q8IYX3 RNU6-1232P-201ENST00000516299 86 ntBASIC1.09□□□□□ -2.23
CCDC116Q8IYX3 RNU6-175P-201ENST00000516896 107 ntBASIC1.09□□□□□ -2.23
CCDC116Q8IYX3 MIR7110-201ENST00000612638 86 ntBASIC1.09□□□□□ -2.23
CCDC116Q8IYX3 RNU6-753P-201ENST00000363926 107 ntBASIC1.08□□□□□ -2.24
CCDC116Q8IYX3 MIR608-201ENST00000384820 100 ntBASIC1.08□□□□□ -2.24
CCDC116Q8IYX3 SNORD71-201ENST00000411292 86 ntBASIC1.08□□□□□ -2.24
CCDC116Q8IYX3 SNORA40.16-201ENST00000517238 121 ntBASIC1.08□□□□□ -2.24
CCDC116Q8IYX3 MIR548AG1-201ENST00000579932 66 ntBASIC1.08□□□□□ -2.24
CCDC116Q8IYX3 MIR4677-201ENST00000584153 80 ntBASIC1.07□□□□□ -2.24
CCDC116Q8IYX3 MIR6788-201ENST00000618842 66 ntBASIC1.07□□□□□ -2.24
CCDC116Q8IYX3 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
CCDC116Q8IYX3 RNU6-246P-201ENST00000384702 107 ntBASIC1.06□□□□□ -2.24
CCDC116Q8IYX3 MIR501-201ENST00000390204 84 ntBASIC1.06□□□□□ -2.24
CCDC116Q8IYX3 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
CCDC116Q8IYX3 RNU4-54P-201ENST00000516428 129 ntBASIC1.06□□□□□ -2.24
CCDC116Q8IYX3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.06□□□□□ -2.24
CCDC116Q8IYX3 MIR96-201ENST00000362288 78 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms