Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL353803.5-201ENST00000599815 141 ntBASIC-0.93□□□□□ -2.56
PRPF39Q86UA1 MIR6888-201ENST00000621977 67 ntBASIC-0.93□□□□□ -2.56
PRPF39Q86UA1 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.94□□□□□ -2.56
PRPF39Q86UA1 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.94□□□□□ -2.56
PRPF39Q86UA1 SNORD64-201ENST00000386683 67 ntBASIC-0.94□□□□□ -2.56
PRPF39Q86UA1 SCARNA23-201ENST00000516060 130 ntBASIC-0.94□□□□□ -2.56
PRPF39Q86UA1 MIR3681-201ENST00000580089 72 ntBASIC-0.94□□□□□ -2.56
PRPF39Q86UA1 MIR548AX-201ENST00000580117 73 ntBASIC-0.94□□□□□ -2.56
PRPF39Q86UA1 MIR6509-201ENST00000614603 85 ntBASIC-0.94□□□□□ -2.56
PRPF39Q86UA1 SNORD114-17-201ENST00000364699 75 ntBASIC-0.95□□□□□ -2.56
PRPF39Q86UA1 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.95□□□□□ -2.56
PRPF39Q86UA1 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.95□□□□□ -2.56
PRPF39Q86UA1 MIR3657-201ENST00000584818 117 ntBASIC-0.95□□□□□ -2.56
PRPF39Q86UA1 AC006254.2-201ENST00000603259 279 ntBASIC-0.95□□□□□ -2.56
PRPF39Q86UA1 RNU6-880P-201ENST00000384526 107 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 MIR590-201ENST00000385008 97 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 MIR1255B2-201ENST00000408618 67 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 RNU6-887P-201ENST00000410660 100 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 RNU7-61P-201ENST00000515897 61 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 RNU6-162P-201ENST00000516228 103 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 RNU7-153P-201ENST00000516455 62 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.96□□□□□ -2.56
PRPF39Q86UA1 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.97□□□□□ -2.56
PRPF39Q86UA1 SNORD116-21-201ENST00000384507 92 ntBASIC-0.97□□□□□ -2.56
PRPF39Q86UA1 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.97□□□□□ -2.56
PRPF39Q86UA1 RNU6-537P-201ENST00000517277 103 ntBASIC-0.97□□□□□ -2.56
PRPF39Q86UA1 RNU6-972P-201ENST00000391208 107 ntBASIC-0.98□□□□□ -2.57
PRPF39Q86UA1 RNU6-109P-201ENST00000516364 107 ntBASIC-0.98□□□□□ -2.57
PRPF39Q86UA1 RNA5SP67-201ENST00000516422 131 ntBASIC-0.98□□□□□ -2.57
PRPF39Q86UA1 RNU6-184P-201ENST00000516514 107 ntBASIC-0.98□□□□□ -2.57
PRPF39Q86UA1 MIR4796-201ENST00000580742 81 ntBASIC-0.98□□□□□ -2.57
PRPF39Q86UA1 AL445584.3-201ENST00000617173 78 ntBASIC-0.98□□□□□ -2.57
PRPF39Q86UA1 RNU5F-1-201ENST00000362507 117 ntBASIC-0.99□□□□□ -2.57
PRPF39Q86UA1 SNORA62.4-201ENST00000365504 151 ntBASIC-0.99□□□□□ -2.57
PRPF39Q86UA1 RNU6-209P-201ENST00000384118 107 ntBASIC-0.99□□□□□ -2.57
PRPF39Q86UA1 AL691482.2-201ENST00000457453 84 ntBASIC-0.99□□□□□ -2.57
PRPF39Q86UA1 CYP3A54P-201ENST00000566950 75 ntBASIC-0.99□□□□□ -2.57
PRPF39Q86UA1 RNU6-774P-201ENST00000363238 107 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 Y_RNA.190-201ENST00000363964 101 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 Y_RNA.261-201ENST00000364631 102 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 SNORD116-14-201ENST00000383894 92 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 SNORD116-17-201ENST00000383929 92 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 SNORD116-15-201ENST00000384445 92 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 SNORD116-19-201ENST00000384729 92 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 RNY1P7-201ENST00000384743 110 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 MIR147A-201ENST00000385079 72 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 SNORD83B-201ENST00000386745 93 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 RNU6-1333P-201ENST00000516162 93 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 Y_RNA.698-201ENST00000516798 118 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 U6.81-201ENST00000612550 106 ntBASIC-1□□□□□ -2.57
PRPF39Q86UA1 SNORA2.1-201ENST00000363089 137 ntBASIC-1.01□□□□□ -2.57
PRPF39Q86UA1 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.01□□□□□ -2.57
PRPF39Q86UA1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.01□□□□□ -2.57
PRPF39Q86UA1 SNORD115-27-201ENST00000364430 82 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 SNORA19-201ENST00000384737 128 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 MIR3133-201ENST00000583157 78 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 MIR382-201ENST00000637119 76 ntBASIC-1.02□□□□□ -2.57
PRPF39Q86UA1 RNU6-274P-201ENST00000459566 107 ntBASIC-1.03□□□□□ -2.57
PRPF39Q86UA1 MIR4499-201ENST00000584834 69 ntBASIC-1.03□□□□□ -2.57
PRPF39Q86UA1 uc_338.19-201ENST00000616808 99 ntBASIC-1.03□□□□□ -2.57
PRPF39Q86UA1 SNORD116-10-201ENST00000363791 102 ntBASIC-1.04□□□□□ -2.58
PRPF39Q86UA1 RNU6-554P-201ENST00000410466 106 ntBASIC-1.04□□□□□ -2.58
PRPF39Q86UA1 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.04□□□□□ -2.58
PRPF39Q86UA1 U7.3-201ENST00000616123 62 ntBASIC-1.04□□□□□ -2.58
PRPF39Q86UA1 MIR409-201ENST00000362237 79 ntBASIC-1.05□□□□□ -2.58
PRPF39Q86UA1 AC140658.3-201ENST00000567603 271 ntBASIC-1.05□□□□□ -2.58
PRPF39Q86UA1 MIR3668-201ENST00000582138 75 ntBASIC-1.05□□□□□ -2.58
PRPF39Q86UA1 AL627230.5-201ENST00000619807 58 ntBASIC-1.05□□□□□ -2.58
PRPF39Q86UA1 RNU6-106P-201ENST00000384405 107 ntBASIC-1.07□□□□□ -2.58
PRPF39Q86UA1 MIR519A2-201ENST00000384990 87 ntBASIC-1.07□□□□□ -2.58
PRPF39Q86UA1 MIR1236-201ENST00000408340 102 ntBASIC-1.07□□□□□ -2.58
PRPF39Q86UA1 SCARNA18B-201ENST00000458806 135 ntBASIC-1.07□□□□□ -2.58
PRPF39Q86UA1 MIR548AG1-201ENST00000579932 66 ntBASIC-1.07□□□□□ -2.58
PRPF39Q86UA1 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 RNU6-746P-201ENST00000384112 109 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 MIR521-2-201ENST00000384818 87 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 MIR1302-5-201ENST00000408164 150 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 RNA5SP470-201ENST00000516463 106 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 MIR3671-201ENST00000580455 88 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 MIR6129-201ENST00000616087 109 ntBASIC-1.08□□□□□ -2.58
PRPF39Q86UA1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.09□□□□□ -2.58
PRPF39Q86UA1 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.09□□□□□ -2.58
PRPF39Q86UA1 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.09□□□□□ -2.58
PRPF39Q86UA1 AL365222.1-201ENST00000614661 98 ntBASIC-1.09□□□□□ -2.58
PRPF39Q86UA1 AL450471.1-201ENST00000447509 127 ntBASIC-1.1□□□□□ -2.59
PRPF39Q86UA1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.1□□□□□ -2.59
PRPF39Q86UA1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.1□□□□□ -2.59
PRPF39Q86UA1 MIR6739-201ENST00000622461 75 ntBASIC-1.1□□□□□ -2.59
PRPF39Q86UA1 RNU6-340P-201ENST00000364005 107 ntBASIC-1.11□□□□□ -2.59
PRPF39Q86UA1 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.11□□□□□ -2.59
PRPF39Q86UA1 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 271.6 ms