Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-162P-201ENST00000516228 103 ntBASIC-0.57□□□□□ -2.5
NUP54Q7Z3B4 MIR8068-201ENST00000618032 68 ntBASIC-0.57□□□□□ -2.5
NUP54Q7Z3B4 RNU6-824P-201ENST00000363724 104 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 MIR224-201ENST00000384889 81 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 AL031737.1-201ENST00000450125 223 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 AC006254.2-201ENST00000603259 279 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 AC090617.8-201ENST00000623339 167 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 MIR2052-201ENST00000636055 55 ntBASIC-0.58□□□□□ -2.5
NUP54Q7Z3B4 RNU6-382P-201ENST00000365181 106 ntBASIC-0.59□□□□□ -2.5
NUP54Q7Z3B4 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.59□□□□□ -2.5
NUP54Q7Z3B4 MTATP8P2-201ENST00000435212 202 ntBASIC-0.59□□□□□ -2.5
NUP54Q7Z3B4 MIR4796-201ENST00000580742 81 ntBASIC-0.59□□□□□ -2.5
NUP54Q7Z3B4 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.6□□□□□ -2.51
NUP54Q7Z3B4 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.6□□□□□ -2.51
NUP54Q7Z3B4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.6□□□□□ -2.51
NUP54Q7Z3B4 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.61□□□□□ -2.51
NUP54Q7Z3B4 RNY4P18-201ENST00000391107 89 ntBASIC-0.61□□□□□ -2.51
NUP54Q7Z3B4 SNORA3B-201ENST00000391305 131 ntBASIC-0.61□□□□□ -2.51
NUP54Q7Z3B4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.61□□□□□ -2.51
NUP54Q7Z3B4 AC108676.2-201ENST00000605225 163 ntBASIC-0.61□□□□□ -2.51
NUP54Q7Z3B4 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.62□□□□□ -2.51
NUP54Q7Z3B4 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.62□□□□□ -2.51
NUP54Q7Z3B4 AL606753.1-201ENST00000427435 87 ntBASIC-0.62□□□□□ -2.51
NUP54Q7Z3B4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.62□□□□□ -2.51
NUP54Q7Z3B4 RNU6-789P-201ENST00000517105 102 ntBASIC-0.62□□□□□ -2.51
NUP54Q7Z3B4 YWHAEP3-201ENST00000582767 121 ntBASIC-0.63□□□□□ -2.51
NUP54Q7Z3B4 MIR6854-201ENST00000614935 69 ntBASIC-0.63□□□□□ -2.51
NUP54Q7Z3B4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 RNU6-905P-201ENST00000384434 107 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 MIR1265-201ENST00000408444 86 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 MIR3681-201ENST00000580089 72 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 U6.81-201ENST00000612550 106 ntBASIC-0.64□□□□□ -2.51
NUP54Q7Z3B4 MIR450A1-201ENST00000362262 91 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 RNU6-755P-201ENST00000364400 103 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 RNU6-260P-201ENST00000384092 107 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 MIR518B-201ENST00000385127 83 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 MT-TQ-201ENST00000387372 72 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 AC021146.9-201ENST00000512503 156 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 MIR4464-201ENST00000580818 92 ntBASIC-0.65□□□□□ -2.51
NUP54Q7Z3B4 MIR204-201ENST00000385200 110 ntBASIC-0.66□□□□□ -2.52
NUP54Q7Z3B4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.66□□□□□ -2.52
NUP54Q7Z3B4 MIR3657-201ENST00000584818 117 ntBASIC-0.66□□□□□ -2.52
NUP54Q7Z3B4 MIR4773-1-201ENST00000637203 78 ntBASIC-0.66□□□□□ -2.52
NUP54Q7Z3B4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 RNU6-35P-201ENST00000384530 107 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 RNU7-153P-201ENST00000516455 62 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.67□□□□□ -2.52
NUP54Q7Z3B4 SNORD95.1-201ENST00000364099 68 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 MIR519C-201ENST00000385053 87 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 RNA5SP25-201ENST00000410815 110 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 RNU6-274P-201ENST00000459566 107 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 AC021146.6-201ENST00000514659 117 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 AP001318.4-201ENST00000616637 121 ntBASIC-0.68□□□□□ -2.52
NUP54Q7Z3B4 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 SNORA2.1-201ENST00000363089 137 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 SNORA33.1-201ENST00000364957 130 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 MIR203A-201ENST00000384836 110 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 SNORA40.13-201ENST00000516379 120 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 RNU6-406P-201ENST00000516470 107 ntBASIC-0.69□□□□□ -2.52
NUP54Q7Z3B4 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.7□□□□□ -2.52
NUP54Q7Z3B4 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.7□□□□□ -2.52
NUP54Q7Z3B4 MIR6509-201ENST00000614603 85 ntBASIC-0.7□□□□□ -2.52
NUP54Q7Z3B4 U6.96-201ENST00000636425 70 ntBASIC-0.7□□□□□ -2.52
NUP54Q7Z3B4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 RNY1P7-201ENST00000384743 110 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 MIR196A1-201ENST00000388006 70 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 AL450471.1-201ENST00000447509 127 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 RNA5SP147-201ENST00000516493 109 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 RNA5SP395-201ENST00000516567 118 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 snoR1.1-201ENST00000628177 80 ntBASIC-0.71□□□□□ -2.52
NUP54Q7Z3B4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.72□□□□□ -2.52
NUP54Q7Z3B4 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.72□□□□□ -2.52
NUP54Q7Z3B4 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.72□□□□□ -2.52
NUP54Q7Z3B4 AP000533.3-201ENST00000447704 118 ntBASIC-0.72□□□□□ -2.52
NUP54Q7Z3B4 AL691482.2-201ENST00000457453 84 ntBASIC-0.72□□□□□ -2.52
NUP54Q7Z3B4 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.72□□□□□ -2.52
NUP54Q7Z3B4 MIR6888-201ENST00000621977 67 ntBASIC-0.72□□□□□ -2.52
NUP54Q7Z3B4 RNU6-633P-201ENST00000362612 103 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms