Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MIR3925-201ENST00000584674 77 ntBASIC0.38□□□□□ -2.35
COLCA1Q6ZS62 uc_338.10-201ENST00000621872 182 ntBASIC0.38□□□□□ -2.35
COLCA1Q6ZS62 RNU6-815P-201ENST00000384080 113 ntBASIC0.37□□□□□ -2.35
COLCA1Q6ZS62 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
COLCA1Q6ZS62 MIR548E-201ENST00000408287 88 ntBASIC0.37□□□□□ -2.35
COLCA1Q6ZS62 MIR4711-201ENST00000578274 70 ntBASIC0.37□□□□□ -2.35
COLCA1Q6ZS62 SNORD114-4-201ENST00000363962 75 ntBASIC0.36□□□□□ -2.35
COLCA1Q6ZS62 SNORD115-22-201ENST00000364456 82 ntBASIC0.36□□□□□ -2.35
COLCA1Q6ZS62 RNU6-1241P-201ENST00000384536 107 ntBASIC0.36□□□□□ -2.35
COLCA1Q6ZS62 Y_RNA.681-201ENST00000516445 113 ntBASIC0.36□□□□□ -2.35
COLCA1Q6ZS62 SNORD114-26-201ENST00000363543 72 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 RNU6-1296P-201ENST00000383879 107 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 RNU6-411P-201ENST00000384451 107 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 Y_RNA.565-201ENST00000384719 101 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 MIR516B1-201ENST00000385211 90 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 RNU6-604P-201ENST00000390917 100 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 RNU6-587P-201ENST00000391282 106 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 RNA5SP193-201ENST00000410353 107 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 snoU13.13-201ENST00000458842 104 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 RNA5SP147-201ENST00000516493 109 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 RNU6-175P-201ENST00000516896 107 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 U7.6-201ENST00000610841 64 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
COLCA1Q6ZS62 SNORA2.1-201ENST00000363089 137 ntBASIC0.34□□□□□ -2.36
COLCA1Q6ZS62 SNORD45.1-201ENST00000363181 77 ntBASIC0.34□□□□□ -2.36
COLCA1Q6ZS62 SNORD115-31-201ENST00000365318 82 ntBASIC0.34□□□□□ -2.36
COLCA1Q6ZS62 MIR193B-201ENST00000384907 83 ntBASIC0.34□□□□□ -2.36
COLCA1Q6ZS62 RNU7-129P-201ENST00000516128 62 ntBASIC0.34□□□□□ -2.36
COLCA1Q6ZS62 RNU7-188P-201ENST00000517063 64 ntBASIC0.34□□□□□ -2.36
COLCA1Q6ZS62 MIR7-2-201ENST00000384970 110 ntBASIC0.33□□□□□ -2.36
COLCA1Q6ZS62 SNORA49-201ENST00000386157 136 ntBASIC0.33□□□□□ -2.36
COLCA1Q6ZS62 RNU6-127P-201ENST00000390897 107 ntBASIC0.33□□□□□ -2.36
COLCA1Q6ZS62 Y_RNA.633-201ENST00000459107 95 ntBASIC0.33□□□□□ -2.36
COLCA1Q6ZS62 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
COLCA1Q6ZS62 AC010487.4-201ENST00000637027 61 ntBASIC0.33□□□□□ -2.36
COLCA1Q6ZS62 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 SNORD45A-201ENST00000384512 84 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 Y_RNA.545-201ENST00000384652 105 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 MIR876-201ENST00000401147 81 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 MIR548H2-201ENST00000408874 88 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 AC073261.1-201ENST00000429409 121 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 AC069113.3-201ENST00000521019 150 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 RN7SL660P-201ENST00000614852 299 ntBASIC0.32□□□□□ -2.36
COLCA1Q6ZS62 SNORA9.1-201ENST00000362412 131 ntBASIC0.31□□□□□ -2.36
COLCA1Q6ZS62 RNA5SP62-201ENST00000363457 110 ntBASIC0.31□□□□□ -2.36
COLCA1Q6ZS62 Y_RNA.205-201ENST00000364128 113 ntBASIC0.31□□□□□ -2.36
COLCA1Q6ZS62 RNU6-982P-201ENST00000516216 102 ntBASIC0.31□□□□□ -2.36
COLCA1Q6ZS62 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
COLCA1Q6ZS62 MIR1273G-201ENST00000577677 100 ntBASIC0.31□□□□□ -2.36
COLCA1Q6ZS62 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.31□□□□□ -2.36
COLCA1Q6ZS62 MIR20A-201ENST00000362279 71 ntBASIC0.3□□□□□ -2.36
COLCA1Q6ZS62 SNORA63.6-201ENST00000364921 119 ntBASIC0.3□□□□□ -2.36
COLCA1Q6ZS62 AC244090.1-201ENST00000441884 93 ntBASIC0.3□□□□□ -2.36
COLCA1Q6ZS62 RNU6-634P-201ENST00000459134 106 ntBASIC0.3□□□□□ -2.36
COLCA1Q6ZS62 AC084368.1-201ENST00000620935 65 ntBASIC0.3□□□□□ -2.36
COLCA1Q6ZS62 MIR6739-201ENST00000622461 75 ntBASIC0.3□□□□□ -2.36
COLCA1Q6ZS62 SNORD113.1-201ENST00000363280 73 ntBASIC0.29□□□□□ -2.36
COLCA1Q6ZS62 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
COLCA1Q6ZS62 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
COLCA1Q6ZS62 RNU6-540P-201ENST00000384622 101 ntBASIC0.29□□□□□ -2.36
COLCA1Q6ZS62 MIR154-201ENST00000385243 84 ntBASIC0.29□□□□□ -2.36
COLCA1Q6ZS62 AC021146.9-201ENST00000512503 156 ntBASIC0.29□□□□□ -2.36
COLCA1Q6ZS62 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
COLCA1Q6ZS62 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
COLCA1Q6ZS62 SNORD114-29-201ENST00000364819 70 ntBASIC0.28□□□□□ -2.36
COLCA1Q6ZS62 RNU6-656P-201ENST00000516785 107 ntBASIC0.28□□□□□ -2.36
COLCA1Q6ZS62 SCARNA11.2-201ENST00000517183 154 ntBASIC0.28□□□□□ -2.36
COLCA1Q6ZS62 Y_RNA.250-201ENST00000364542 110 ntBASIC0.27□□□□□ -2.37
COLCA1Q6ZS62 SNORD116-24-201ENST00000384549 92 ntBASIC0.27□□□□□ -2.37
COLCA1Q6ZS62 RNU6-881P-201ENST00000516813 102 ntBASIC0.27□□□□□ -2.37
COLCA1Q6ZS62 MIR8053-201ENST00000613344 75 ntBASIC0.27□□□□□ -2.37
COLCA1Q6ZS62 MIR6779-201ENST00000617283 64 ntBASIC0.27□□□□□ -2.37
COLCA1Q6ZS62 RNU6-645P-201ENST00000364649 106 ntBASIC0.26□□□□□ -2.37
COLCA1Q6ZS62 MIR643-201ENST00000385267 97 ntBASIC0.26□□□□□ -2.37
COLCA1Q6ZS62 SNORA33.1-201ENST00000364957 130 ntBASIC0.25□□□□□ -2.37
COLCA1Q6ZS62 Y_RNA.540-201ENST00000384638 111 ntBASIC0.25□□□□□ -2.37
COLCA1Q6ZS62 MIR521-2-201ENST00000384818 87 ntBASIC0.25□□□□□ -2.37
COLCA1Q6ZS62 AC090617.8-201ENST00000623339 167 ntBASIC0.25□□□□□ -2.37
COLCA1Q6ZS62 MIR924-201ENST00000638017 53 ntBASIC0.25□□□□□ -2.37
COLCA1Q6ZS62 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
COLCA1Q6ZS62 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
COLCA1Q6ZS62 RNU6-1036P-201ENST00000383959 104 ntBASIC0.23□□□□□ -2.37
COLCA1Q6ZS62 SNORA75.1-201ENST00000391130 148 ntBASIC0.23□□□□□ -2.37
COLCA1Q6ZS62 MIR106A-201ENST00000384870 81 ntBASIC0.22□□□□□ -2.37
COLCA1Q6ZS62 RNU6-337P-201ENST00000391243 106 ntBASIC0.22□□□□□ -2.37
COLCA1Q6ZS62 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
COLCA1Q6ZS62 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
COLCA1Q6ZS62 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
COLCA1Q6ZS62 SNORA15B-2-201ENST00000384058 135 ntBASIC0.21□□□□□ -2.38
COLCA1Q6ZS62 SNORA15B-1-201ENST00000384334 135 ntBASIC0.21□□□□□ -2.38
COLCA1Q6ZS62 AL109933.3-201ENST00000619095 188 ntBASIC0.21□□□□□ -2.38
COLCA1Q6ZS62 RNU6-1216P-201ENST00000362590 107 ntBASIC0.2□□□□□ -2.38
COLCA1Q6ZS62 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
COLCA1Q6ZS62 RNA5SP325-201ENST00000363756 130 ntBASIC0.2□□□□□ -2.38
COLCA1Q6ZS62 RNU6-1162P-201ENST00000384443 104 ntBASIC0.2□□□□□ -2.38
COLCA1Q6ZS62 RNU6-871P-201ENST00000516122 100 ntBASIC0.2□□□□□ -2.38
COLCA1Q6ZS62 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
COLCA1Q6ZS62 AC104408.1-201ENST00000605241 170 ntBASIC0.2□□□□□ -2.38
COLCA1Q6ZS62 RNU6-502P-201ENST00000362419 108 ntBASIC0.19□□□□□ -2.38
COLCA1Q6ZS62 RNU6-663P-201ENST00000391105 106 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 670 ms