Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR582-201ENST00000365731 98 ntBASIC0.43□□□□□ -2.34
ZNF549Q6P9A3 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
ZNF549Q6P9A3 RNU6-634P-201ENST00000459134 106 ntBASIC0.43□□□□□ -2.34
ZNF549Q6P9A3 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
ZNF549Q6P9A3 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
ZNF549Q6P9A3 SNORA2.1-201ENST00000363089 137 ntBASIC0.42□□□□□ -2.34
ZNF549Q6P9A3 SNORD45.1-201ENST00000363181 77 ntBASIC0.42□□□□□ -2.34
ZNF549Q6P9A3 RNU6-604P-201ENST00000390917 100 ntBASIC0.42□□□□□ -2.34
ZNF549Q6P9A3 MIR548E-201ENST00000408287 88 ntBASIC0.42□□□□□ -2.34
ZNF549Q6P9A3 MIR4677-201ENST00000584153 80 ntBASIC0.42□□□□□ -2.34
ZNF549Q6P9A3 MIR548AD-201ENST00000584780 82 ntBASIC0.42□□□□□ -2.34
ZNF549Q6P9A3 SNORD114-4-201ENST00000363962 75 ntBASIC0.41□□□□□ -2.34
ZNF549Q6P9A3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.41□□□□□ -2.34
ZNF549Q6P9A3 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
ZNF549Q6P9A3 SNORD45A-201ENST00000384512 84 ntBASIC0.4□□□□□ -2.35
ZNF549Q6P9A3 MIR7-2-201ENST00000384970 110 ntBASIC0.4□□□□□ -2.35
ZNF549Q6P9A3 MIR760-201ENST00000390220 80 ntBASIC0.4□□□□□ -2.35
ZNF549Q6P9A3 RNA5SP480-201ENST00000516840 109 ntBASIC0.4□□□□□ -2.35
ZNF549Q6P9A3 uc_338.10-201ENST00000621872 182 ntBASIC0.4□□□□□ -2.35
ZNF549Q6P9A3 SNORD114-23-201ENST00000363536 72 ntBASIC0.39□□□□□ -2.35
ZNF549Q6P9A3 SNORD114-26-201ENST00000363543 72 ntBASIC0.39□□□□□ -2.35
ZNF549Q6P9A3 RNA5SP128-201ENST00000365305 116 ntBASIC0.39□□□□□ -2.35
ZNF549Q6P9A3 RNU6-540P-201ENST00000384622 101 ntBASIC0.39□□□□□ -2.35
ZNF549Q6P9A3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.39□□□□□ -2.35
ZNF549Q6P9A3 MIR3925-201ENST00000584674 77 ntBASIC0.39□□□□□ -2.35
ZNF549Q6P9A3 MIR154-201ENST00000385243 84 ntBASIC0.38□□□□□ -2.35
ZNF549Q6P9A3 RNA5SP147-201ENST00000516493 109 ntBASIC0.38□□□□□ -2.35
ZNF549Q6P9A3 U7.6-201ENST00000610841 64 ntBASIC0.38□□□□□ -2.35
ZNF549Q6P9A3 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
ZNF549Q6P9A3 MIR6739-201ENST00000622461 75 ntBASIC0.38□□□□□ -2.35
ZNF549Q6P9A3 SNORD113.1-201ENST00000363280 73 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 SNORD116-24-201ENST00000384549 92 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 MIR516B1-201ENST00000385211 90 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 snoU13.13-201ENST00000458842 104 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 RNU6-982P-201ENST00000516216 102 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 RNU6-175P-201ENST00000516896 107 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 MIR8053-201ENST00000613344 75 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 MIR499B-201ENST00000636498 73 ntBASIC0.37□□□□□ -2.35
ZNF549Q6P9A3 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
ZNF549Q6P9A3 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
ZNF549Q6P9A3 RNU7-188P-201ENST00000517063 64 ntBASIC0.36□□□□□ -2.35
ZNF549Q6P9A3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.36□□□□□ -2.35
ZNF549Q6P9A3 AC010487.4-201ENST00000637027 61 ntBASIC0.36□□□□□ -2.35
ZNF549Q6P9A3 SNORA63.6-201ENST00000364921 119 ntBASIC0.35□□□□□ -2.35
ZNF549Q6P9A3 SNORA49-201ENST00000386157 136 ntBASIC0.35□□□□□ -2.35
ZNF549Q6P9A3 MIR876-201ENST00000401147 81 ntBASIC0.35□□□□□ -2.35
ZNF549Q6P9A3 AC244090.1-201ENST00000441884 93 ntBASIC0.35□□□□□ -2.35
ZNF549Q6P9A3 RNU6-656P-201ENST00000516785 107 ntBASIC0.35□□□□□ -2.35
ZNF549Q6P9A3 RNU6-881P-201ENST00000516813 102 ntBASIC0.35□□□□□ -2.35
ZNF549Q6P9A3 MIR20A-201ENST00000362279 71 ntBASIC0.34□□□□□ -2.36
ZNF549Q6P9A3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.34□□□□□ -2.36
ZNF549Q6P9A3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
ZNF549Q6P9A3 AC021146.9-201ENST00000512503 156 ntBASIC0.34□□□□□ -2.36
ZNF549Q6P9A3 RN7SL660P-201ENST00000614852 299 ntBASIC0.34□□□□□ -2.36
ZNF549Q6P9A3 RNU6-645P-201ENST00000364649 106 ntBASIC0.33□□□□□ -2.36
ZNF549Q6P9A3 MIR193B-201ENST00000384907 83 ntBASIC0.33□□□□□ -2.36
ZNF549Q6P9A3 RNU6-127P-201ENST00000390897 107 ntBASIC0.33□□□□□ -2.36
ZNF549Q6P9A3 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
ZNF549Q6P9A3 AC114801.3-201ENST00000510231 177 ntBASIC0.33□□□□□ -2.36
ZNF549Q6P9A3 RNU6-871P-201ENST00000516122 100 ntBASIC0.33□□□□□ -2.36
ZNF549Q6P9A3 SNORA9.1-201ENST00000362412 131 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 SNORD114-29-201ENST00000364819 70 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 MIR521-2-201ENST00000384818 87 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 MIR548H2-201ENST00000408874 88 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 AC073261.1-201ENST00000429409 121 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 AC139453.2-201ENST00000487255 133 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 RNU7-129P-201ENST00000516128 62 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 AC069113.3-201ENST00000521019 150 ntBASIC0.32□□□□□ -2.36
ZNF549Q6P9A3 SNORA33.1-201ENST00000364957 130 ntBASIC0.31□□□□□ -2.36
ZNF549Q6P9A3 RNU6-539P-201ENST00000516665 103 ntBASIC0.31□□□□□ -2.36
ZNF549Q6P9A3 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 RNU6-663P-201ENST00000391105 106 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 RNU6-782P-201ENST00000516852 104 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 MIR1273G-201ENST00000577677 100 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 AC084368.1-201ENST00000620935 65 ntBASIC0.3□□□□□ -2.36
ZNF549Q6P9A3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
ZNF549Q6P9A3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.29□□□□□ -2.36
ZNF549Q6P9A3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.29□□□□□ -2.36
ZNF549Q6P9A3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.29□□□□□ -2.36
ZNF549Q6P9A3 AC090617.8-201ENST00000623339 167 ntBASIC0.29□□□□□ -2.36
ZNF549Q6P9A3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.28□□□□□ -2.36
ZNF549Q6P9A3 RNU6-895P-201ENST00000384125 103 ntBASIC0.28□□□□□ -2.36
ZNF549Q6P9A3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.28□□□□□ -2.36
ZNF549Q6P9A3 SNORD30.1-201ENST00000391309 70 ntBASIC0.28□□□□□ -2.36
ZNF549Q6P9A3 AL109933.3-201ENST00000619095 188 ntBASIC0.28□□□□□ -2.36
ZNF549Q6P9A3 U6.111-201ENST00000636093 83 ntBASIC0.28□□□□□ -2.36
ZNF549Q6P9A3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.27□□□□□ -2.37
ZNF549Q6P9A3 RNU6-649P-201ENST00000384463 107 ntBASIC0.27□□□□□ -2.37
ZNF549Q6P9A3 MIR106A-201ENST00000384870 81 ntBASIC0.27□□□□□ -2.37
ZNF549Q6P9A3 RNU6-337P-201ENST00000391243 106 ntBASIC0.27□□□□□ -2.37
ZNF549Q6P9A3 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
ZNF549Q6P9A3 MIR6779-201ENST00000617283 64 ntBASIC0.27□□□□□ -2.37
ZNF549Q6P9A3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.26□□□□□ -2.37
ZNF549Q6P9A3 AC005520.4-201ENST00000604337 90 ntBASIC0.26□□□□□ -2.37
ZNF549Q6P9A3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.25□□□□□ -2.37
ZNF549Q6P9A3 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
ZNF549Q6P9A3 SNORA75.1-201ENST00000391130 148 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms