Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 SNORA18.5-201ENST00000516616 101 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 RNU6-158P-201ENST00000517104 100 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 RNU6-794P-201ENST00000517261 64 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 MIR365A-201ENST00000362260 87 ntBASIC-1.01□□□□□ -2.57
ATL3Q6DD88 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.01□□□□□ -2.57
ATL3Q6DD88 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.01□□□□□ -2.57
ATL3Q6DD88 SNORD58A-201ENST00000383875 65 ntBASIC-1.01□□□□□ -2.57
ATL3Q6DD88 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.01□□□□□ -2.57
ATL3Q6DD88 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.02□□□□□ -2.57
ATL3Q6DD88 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
ATL3Q6DD88 snosnR66.1-201ENST00000391095 99 ntBASIC-1.03□□□□□ -2.57
ATL3Q6DD88 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.03□□□□□ -2.57
ATL3Q6DD88 YWHAEP3-201ENST00000582767 121 ntBASIC-1.03□□□□□ -2.57
ATL3Q6DD88 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.03□□□□□ -2.57
ATL3Q6DD88 SNORD83B-201ENST00000386745 93 ntBASIC-1.04□□□□□ -2.58
ATL3Q6DD88 RNU6-904P-201ENST00000516206 101 ntBASIC-1.04□□□□□ -2.58
ATL3Q6DD88 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 RNU6-907P-201ENST00000390924 102 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 RNU6-972P-201ENST00000391208 107 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 MIR1285-2-201ENST00000408311 88 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 MTATP6P29-201ENST00000415057 132 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 AL500527.2-201ENST00000454105 95 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 SCARNA23-201ENST00000516060 130 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 snoR1.1-201ENST00000628177 80 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.05□□□□□ -2.58
ATL3Q6DD88 RNU6-382P-201ENST00000365181 106 ntBASIC-1.06□□□□□ -2.58
ATL3Q6DD88 RNU6-260P-201ENST00000384092 107 ntBASIC-1.06□□□□□ -2.58
ATL3Q6DD88 RNU6-905P-201ENST00000384434 107 ntBASIC-1.06□□□□□ -2.58
ATL3Q6DD88 SNORA19.1-201ENST00000410656 129 ntBASIC-1.06□□□□□ -2.58
ATL3Q6DD88 MIR4441-201ENST00000582623 100 ntBASIC-1.06□□□□□ -2.58
ATL3Q6DD88 AC090425.1-201ENST00000610007 140 ntBASIC-1.06□□□□□ -2.58
ATL3Q6DD88 RNY4P27-201ENST00000363341 96 ntBASIC-1.07□□□□□ -2.58
ATL3Q6DD88 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.07□□□□□ -2.58
ATL3Q6DD88 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
ATL3Q6DD88 snoU13.17-201ENST00000458802 104 ntBASIC-1.07□□□□□ -2.58
ATL3Q6DD88 AC022137.1-201ENST00000483735 151 ntBASIC-1.07□□□□□ -2.58
ATL3Q6DD88 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.07□□□□□ -2.58
ATL3Q6DD88 AC090617.8-201ENST00000623339 167 ntBASIC-1.07□□□□□ -2.58
ATL3Q6DD88 AP000533.3-201ENST00000447704 118 ntBASIC-1.08□□□□□ -2.58
ATL3Q6DD88 AC021146.9-201ENST00000512503 156 ntBASIC-1.08□□□□□ -2.58
ATL3Q6DD88 AC006254.2-201ENST00000603259 279 ntBASIC-1.08□□□□□ -2.58
ATL3Q6DD88 RNU6-824P-201ENST00000363724 104 ntBASIC-1.09□□□□□ -2.58
ATL3Q6DD88 SNORD114-25-201ENST00000363742 72 ntBASIC-1.09□□□□□ -2.58
ATL3Q6DD88 MIR548I1-201ENST00000408810 149 ntBASIC-1.09□□□□□ -2.58
ATL3Q6DD88 RNU6-887P-201ENST00000410660 100 ntBASIC-1.09□□□□□ -2.58
ATL3Q6DD88 RNU6-412P-201ENST00000516434 106 ntBASIC-1.09□□□□□ -2.58
ATL3Q6DD88 RNU6-537P-201ENST00000517277 103 ntBASIC-1.09□□□□□ -2.58
ATL3Q6DD88 U6.96-201ENST00000636425 70 ntBASIC-1.09□□□□□ -2.58
ATL3Q6DD88 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.1□□□□□ -2.59
ATL3Q6DD88 RNU6-880P-201ENST00000384526 107 ntBASIC-1.1□□□□□ -2.59
ATL3Q6DD88 MIR517B-201ENST00000385102 67 ntBASIC-1.1□□□□□ -2.59
ATL3Q6DD88 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.1□□□□□ -2.59
ATL3Q6DD88 AC026421.1-201ENST00000519101 163 ntBASIC-1.1□□□□□ -2.59
ATL3Q6DD88 MIR3165-201ENST00000579874 75 ntBASIC-1.1□□□□□ -2.59
ATL3Q6DD88 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.1□□□□□ -2.59
ATL3Q6DD88 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.1□□□□□ -2.59
ATL3Q6DD88 SNORA62.4-201ENST00000365504 151 ntBASIC-1.11□□□□□ -2.59
ATL3Q6DD88 SNORD116-14-201ENST00000383894 92 ntBASIC-1.11□□□□□ -2.59
ATL3Q6DD88 SNORD116-17-201ENST00000383929 92 ntBASIC-1.11□□□□□ -2.59
ATL3Q6DD88 SNORD116-15-201ENST00000384445 92 ntBASIC-1.11□□□□□ -2.59
ATL3Q6DD88 SNORD116-21-201ENST00000384507 92 ntBASIC-1.11□□□□□ -2.59
ATL3Q6DD88 SNORD116-19-201ENST00000384729 92 ntBASIC-1.11□□□□□ -2.59
ATL3Q6DD88 MIR4464-201ENST00000580818 92 ntBASIC-1.12□□□□□ -2.59
ATL3Q6DD88 RNU6-208P-201ENST00000362431 107 ntBASIC-1.13□□□□□ -2.59
ATL3Q6DD88 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.13□□□□□ -2.59
ATL3Q6DD88 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.13□□□□□ -2.59
ATL3Q6DD88 MIR4499-201ENST00000584834 69 ntBASIC-1.13□□□□□ -2.59
ATL3Q6DD88 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.14□□□□□ -2.59
ATL3Q6DD88 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.14□□□□□ -2.59
ATL3Q6DD88 MIR4773-1-201ENST00000637203 78 ntBASIC-1.14□□□□□ -2.59
ATL3Q6DD88 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.15□□□□□ -2.59
ATL3Q6DD88 SNORD116-10-201ENST00000363791 102 ntBASIC-1.15□□□□□ -2.59
ATL3Q6DD88 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.15□□□□□ -2.59
ATL3Q6DD88 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.16□□□□□ -2.6
ATL3Q6DD88 MIR124-2-201ENST00000385081 109 ntBASIC-1.16□□□□□ -2.6
ATL3Q6DD88 SNORD18.2-201ENST00000459604 70 ntBASIC-1.16□□□□□ -2.6
ATL3Q6DD88 MIR3657-201ENST00000584818 117 ntBASIC-1.16□□□□□ -2.6
ATL3Q6DD88 AL353803.5-201ENST00000599815 141 ntBASIC-1.16□□□□□ -2.6
ATL3Q6DD88 MIR6509-201ENST00000614603 85 ntBASIC-1.16□□□□□ -2.6
ATL3Q6DD88 uc_338.19-201ENST00000616808 99 ntBASIC-1.16□□□□□ -2.6
ATL3Q6DD88 RNU5F-1-201ENST00000362507 117 ntBASIC-1.17□□□□□ -2.6
ATL3Q6DD88 SNORA2.1-201ENST00000363089 137 ntBASIC-1.17□□□□□ -2.6
ATL3Q6DD88 SNORA33.1-201ENST00000364957 130 ntBASIC-1.17□□□□□ -2.6
ATL3Q6DD88 MIR203A-201ENST00000384836 110 ntBASIC-1.17□□□□□ -2.6
ATL3Q6DD88 MIR590-201ENST00000385008 97 ntBASIC-1.17□□□□□ -2.6
ATL3Q6DD88 MIR147A-201ENST00000385079 72 ntBASIC-1.17□□□□□ -2.6
ATL3Q6DD88 U6.81-201ENST00000612550 106 ntBASIC-1.17□□□□□ -2.6
ATL3Q6DD88 RNU6-704P-201ENST00000364162 103 ntBASIC-1.18□□□□□ -2.6
ATL3Q6DD88 RNU6-431P-201ENST00000383874 107 ntBASIC-1.18□□□□□ -2.6
ATL3Q6DD88 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.18□□□□□ -2.6
ATL3Q6DD88 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.18□□□□□ -2.6
ATL3Q6DD88 MIR4796-201ENST00000580742 81 ntBASIC-1.18□□□□□ -2.6
ATL3Q6DD88 MIR6888-201ENST00000621977 67 ntBASIC-1.18□□□□□ -2.6
ATL3Q6DD88 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.19□□□□□ -2.6
ATL3Q6DD88 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.19□□□□□ -2.6
ATL3Q6DD88 RNU7-61P-201ENST00000515897 61 ntBASIC-1.19□□□□□ -2.6
ATL3Q6DD88 RNA5SP147-201ENST00000516493 109 ntBASIC-1.19□□□□□ -2.6
ATL3Q6DD88 CYP3A54P-201ENST00000566950 75 ntBASIC-1.19□□□□□ -2.6
ATL3Q6DD88 AL445584.3-201ENST00000617173 78 ntBASIC-1.19□□□□□ -2.6
ATL3Q6DD88 MIR1236-201ENST00000408340 102 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 271.3 ms