Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR548P-201ENST00000408336 84 ntBASIC-3.45□□□□□ -2.96
HIST1H1AQ02539 MIR3121-201ENST00000579680 77 ntBASIC-3.45□□□□□ -2.96
HIST1H1AQ02539 MIR4439-201ENST00000583746 80 ntBASIC-3.45□□□□□ -2.96
HIST1H1AQ02539 Y_RNA.197-201ENST00000364004 102 ntBASIC-3.46□□□□□ -2.96
HIST1H1AQ02539 MIR548A3-201ENST00000385297 97 ntBASIC-3.46□□□□□ -2.96
HIST1H1AQ02539 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.46□□□□□ -2.96
HIST1H1AQ02539 SNORD19B-201ENST00000459623 84 ntBASIC-3.46□□□□□ -2.96
HIST1H1AQ02539 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.46□□□□□ -2.96
HIST1H1AQ02539 AC103810.7-201ENST00000607821 91 ntBASIC-3.46□□□□□ -2.96
HIST1H1AQ02539 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.47□□□□□ -2.96
HIST1H1AQ02539 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.47□□□□□ -2.96
HIST1H1AQ02539 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.47□□□□□ -2.96
HIST1H1AQ02539 MIR4643-201ENST00000577473 78 ntBASIC-3.47□□□□□ -2.96
HIST1H1AQ02539 MIR4694-201ENST00000578534 80 ntBASIC-3.47□□□□□ -2.96
HIST1H1AQ02539 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.47□□□□□ -2.96
HIST1H1AQ02539 MIR548F1-201ENST00000408667 84 ntBASIC-3.48□□□□□ -2.97
HIST1H1AQ02539 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.48□□□□□ -2.97
HIST1H1AQ02539 RNY4-201ENST00000516507 96 ntBASIC-3.48□□□□□ -2.97
HIST1H1AQ02539 MIR429-201ENST00000362106 83 ntBASIC-3.49□□□□□ -2.97
HIST1H1AQ02539 AC090971.5-201ENST00000621102 293 ntBASIC-3.49□□□□□ -2.97
HIST1H1AQ02539 MIR1302-1-201ENST00000637932 143 ntBASIC-3.49□□□□□ -2.97
HIST1H1AQ02539 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.5□□□□□ -2.97
HIST1H1AQ02539 RNY4P9-201ENST00000363194 97 ntBASIC-3.5□□□□□ -2.97
HIST1H1AQ02539 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.51□□□□□ -2.97
HIST1H1AQ02539 Y_RNA.194-201ENST00000363985 102 ntBASIC-3.51□□□□□ -2.97
HIST1H1AQ02539 RNU6-598P-201ENST00000364017 105 ntBASIC-3.51□□□□□ -2.97
HIST1H1AQ02539 RNU6-813P-201ENST00000384691 107 ntBASIC-3.51□□□□□ -2.97
HIST1H1AQ02539 SNORD37.2-201ENST00000391075 66 ntBASIC-3.51□□□□□ -2.97
HIST1H1AQ02539 MIR548C-201ENST00000384815 97 ntBASIC-3.52□□□□□ -2.97
HIST1H1AQ02539 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.52□□□□□ -2.97
HIST1H1AQ02539 AL160413.1-201ENST00000622780 310 ntBASIC-3.52□□□□□ -2.97
HIST1H1AQ02539 SNORD127-201ENST00000458892 86 ntBASIC-3.53□□□□□ -2.97
HIST1H1AQ02539 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.54□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.54□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.688-201ENST00000516565 95 ntBASIC-3.54□□□□□ -2.98
HIST1H1AQ02539 AC130289.1-201ENST00000577321 73 ntBASIC-3.54□□□□□ -2.98
HIST1H1AQ02539 RNU6-230P-201ENST00000362457 104 ntBASIC-3.55□□□□□ -2.98
HIST1H1AQ02539 RNY3P14-201ENST00000384309 102 ntBASIC-3.55□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.516-201ENST00000384541 124 ntBASIC-3.55□□□□□ -2.98
HIST1H1AQ02539 MIR3170-201ENST00000582699 77 ntBASIC-3.55□□□□□ -2.98
HIST1H1AQ02539 AC013734.1-201ENST00000619329 111 ntBASIC-3.55□□□□□ -2.98
HIST1H1AQ02539 RNY3P2-201ENST00000362918 102 ntBASIC-3.56□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.56□□□□□ -2.98
HIST1H1AQ02539 AC097484.2-201ENST00000509147 251 ntBASIC-3.56□□□□□ -2.98
HIST1H1AQ02539 MIR3613-201ENST00000579844 87 ntBASIC-3.56□□□□□ -2.98
HIST1H1AQ02539 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.56□□□□□ -2.98
HIST1H1AQ02539 MIR3658-201ENST00000636291 56 ntBASIC-3.56□□□□□ -2.98
HIST1H1AQ02539 RNU6-682P-201ENST00000363843 106 ntBASIC-3.57□□□□□ -2.98
HIST1H1AQ02539 SNORD45B-201ENST00000364617 72 ntBASIC-3.57□□□□□ -2.98
HIST1H1AQ02539 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.57□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.57□□□□□ -2.98
HIST1H1AQ02539 RBMX2P4-201ENST00000441256 376 ntBASIC-3.57□□□□□ -2.98
HIST1H1AQ02539 MIR3144-201ENST00000579460 79 ntBASIC-3.57□□□□□ -2.98
HIST1H1AQ02539 U6.97-201ENST00000636904 101 ntBASIC-3.57□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.58□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.59□□□□□ -2.98
HIST1H1AQ02539 MT-TL1-201ENST00000386347 75 ntBASIC-3.59□□□□□ -2.98
HIST1H1AQ02539 MIR1302-6-201ENST00000408466 90 ntBASIC-3.59□□□□□ -2.98
HIST1H1AQ02539 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.59□□□□□ -2.98
HIST1H1AQ02539 U2.18-201ENST00000622185 84 ntBASIC-3.59□□□□□ -2.98
HIST1H1AQ02539 RNU7-174P-201ENST00000516248 59 ntBASIC-3.6□□□□□ -2.99
HIST1H1AQ02539 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.6□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.6□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 RNU6-645P-201ENST00000364649 106 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 RNU6-876P-201ENST00000391295 104 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 MIR4796-201ENST00000580742 81 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.61□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.62□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.62□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.62□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.62□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.62□□□□□ -2.99
HIST1H1AQ02539 RNU6-340P-201ENST00000364005 107 ntBASIC-3.63□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.63□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.455-201ENST00000384230 98 ntBASIC-3.63□□□□□ -2.99
HIST1H1AQ02539 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.63□□□□□ -2.99
HIST1H1AQ02539 RNU6-587P-201ENST00000391282 106 ntBASIC-3.63□□□□□ -2.99
HIST1H1AQ02539 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.63□□□□□ -2.99
HIST1H1AQ02539 AC113195.1-201ENST00000579952 141 ntBASIC-3.63□□□□□ -2.99
HIST1H1AQ02539 RNU6-247P-201ENST00000362636 107 ntBASIC-3.64□□□□□ -2.99
HIST1H1AQ02539 RNU6-681P-201ENST00000364012 104 ntBASIC-3.64□□□□□ -2.99
HIST1H1AQ02539 RNU6-239P-201ENST00000390990 99 ntBASIC-3.64□□□□□ -2.99
HIST1H1AQ02539 AL450471.1-201ENST00000447509 127 ntBASIC-3.64□□□□□ -2.99
HIST1H1AQ02539 RNU7-121P-201ENST00000516604 62 ntBASIC-3.64□□□□□ -2.99
HIST1H1AQ02539 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.64□□□□□ -2.99
HIST1H1AQ02539 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.65□□□□□ -2.99
HIST1H1AQ02539 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.65□□□□□ -2.99
HIST1H1AQ02539 MIR548AA1-201ENST00000384971 97 ntBASIC-3.66□□□□□ -3
HIST1H1AQ02539 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.67□□□□□ -3
HIST1H1AQ02539 RNU6-141P-201ENST00000410499 105 ntBASIC-3.67□□□□□ -3
HIST1H1AQ02539 RNU6-781P-201ENST00000516377 101 ntBASIC-3.67□□□□□ -3
HIST1H1AQ02539 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.67□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 237.2 ms