Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RNA5SP128-201ENST00000365305 116 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 MIR582-201ENST00000365731 98 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
ERVFC1-1P60608 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 Y_RNA.681-201ENST00000516445 113 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 U7.6-201ENST00000610841 64 ntBASIC0.35□□□□□ -2.35
ERVFC1-1P60608 Y_RNA.205-201ENST00000364128 113 ntBASIC0.34□□□□□ -2.36
ERVFC1-1P60608 RNU6-687P-201ENST00000516443 89 ntBASIC0.34□□□□□ -2.36
ERVFC1-1P60608 MIR1273G-201ENST00000577677 100 ntBASIC0.34□□□□□ -2.36
ERVFC1-1P60608 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
ERVFC1-1P60608 MIR499B-201ENST00000636498 73 ntBASIC0.34□□□□□ -2.36
ERVFC1-1P60608 RNU6-1296P-201ENST00000383879 107 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 RNU6-815P-201ENST00000384080 113 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 RNU6-411P-201ENST00000384451 107 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 RNU6-1241P-201ENST00000384536 107 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 MIR516B1-201ENST00000385211 90 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 MIR548E-201ENST00000408287 88 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 RNU6-1015P-201ENST00000517121 99 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 MIR3925-201ENST00000584674 77 ntBASIC0.33□□□□□ -2.36
ERVFC1-1P60608 SNORA2.1-201ENST00000363089 137 ntBASIC0.32□□□□□ -2.36
ERVFC1-1P60608 SNORD45.1-201ENST00000363181 77 ntBASIC0.32□□□□□ -2.36
ERVFC1-1P60608 Y_RNA.565-201ENST00000384719 101 ntBASIC0.32□□□□□ -2.36
ERVFC1-1P60608 RNU6-587P-201ENST00000391282 106 ntBASIC0.32□□□□□ -2.36
ERVFC1-1P60608 RNU7-129P-201ENST00000516128 62 ntBASIC0.32□□□□□ -2.36
ERVFC1-1P60608 RNA5SP147-201ENST00000516493 109 ntBASIC0.32□□□□□ -2.36
ERVFC1-1P60608 SNORD115-22-201ENST00000364456 82 ntBASIC0.31□□□□□ -2.36
ERVFC1-1P60608 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
ERVFC1-1P60608 RNU6-604P-201ENST00000390917 100 ntBASIC0.31□□□□□ -2.36
ERVFC1-1P60608 RNU7-188P-201ENST00000517063 64 ntBASIC0.31□□□□□ -2.36
ERVFC1-1P60608 SNORA9.1-201ENST00000362412 131 ntBASIC0.3□□□□□ -2.36
ERVFC1-1P60608 Y_RNA.545-201ENST00000384652 105 ntBASIC0.3□□□□□ -2.36
ERVFC1-1P60608 AC073261.1-201ENST00000429409 121 ntBASIC0.3□□□□□ -2.36
ERVFC1-1P60608 snoU13.13-201ENST00000458842 104 ntBASIC0.3□□□□□ -2.36
ERVFC1-1P60608 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
ERVFC1-1P60608 RNA5SP62-201ENST00000363457 110 ntBASIC0.29□□□□□ -2.36
ERVFC1-1P60608 SNORD115-31-201ENST00000365318 82 ntBASIC0.29□□□□□ -2.36
ERVFC1-1P60608 SNORD45A-201ENST00000384512 84 ntBASIC0.29□□□□□ -2.36
ERVFC1-1P60608 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
ERVFC1-1P60608 RNU6-175P-201ENST00000516896 107 ntBASIC0.29□□□□□ -2.36
ERVFC1-1P60608 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
ERVFC1-1P60608 MIR20A-201ENST00000362279 71 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 MIR154-201ENST00000385243 84 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 MIR876-201ENST00000401147 81 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 AC244090.1-201ENST00000441884 93 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 Y_RNA.633-201ENST00000459107 95 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 RNU6-634P-201ENST00000459134 106 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 AC021146.9-201ENST00000512503 156 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 SNORA62.5-201ENST00000516634 120 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 RN7SL660P-201ENST00000614852 299 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 AC084368.1-201ENST00000620935 65 ntBASIC0.28□□□□□ -2.36
ERVFC1-1P60608 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 RNA5SP499-201ENST00000363982 119 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 SNORD114-29-201ENST00000364819 70 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 SNORA63.6-201ENST00000364921 119 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 RNU6-982P-201ENST00000516216 102 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 MIR8053-201ENST00000613344 75 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 MIR6739-201ENST00000622461 75 ntBASIC0.27□□□□□ -2.37
ERVFC1-1P60608 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.27□□□□□ -2.37
ERVFC1-1P60608 SNORD113.1-201ENST00000363280 73 ntBASIC0.26□□□□□ -2.37
ERVFC1-1P60608 SNORA49-201ENST00000386157 136 ntBASIC0.26□□□□□ -2.37
ERVFC1-1P60608 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
ERVFC1-1P60608 MIR8087-201ENST00000612745 78 ntBASIC0.26□□□□□ -2.37
ERVFC1-1P60608 RNA5SP325-201ENST00000363756 130 ntBASIC0.25□□□□□ -2.37
ERVFC1-1P60608 Y_RNA.250-201ENST00000364542 110 ntBASIC0.25□□□□□ -2.37
ERVFC1-1P60608 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
ERVFC1-1P60608 RNU6-881P-201ENST00000516813 102 ntBASIC0.25□□□□□ -2.37
ERVFC1-1P60608 RNU6-782P-201ENST00000516852 104 ntBASIC0.25□□□□□ -2.37
ERVFC1-1P60608 MIR330-201ENST00000362196 94 ntBASIC0.24□□□□□ -2.37
ERVFC1-1P60608 RNU6-645P-201ENST00000364649 106 ntBASIC0.24□□□□□ -2.37
ERVFC1-1P60608 RNU6-540P-201ENST00000384622 101 ntBASIC0.24□□□□□ -2.37
ERVFC1-1P60608 MIR643-201ENST00000385267 97 ntBASIC0.24□□□□□ -2.37
ERVFC1-1P60608 MIR548H2-201ENST00000408874 88 ntBASIC0.24□□□□□ -2.37
ERVFC1-1P60608 RNU6-656P-201ENST00000516785 107 ntBASIC0.24□□□□□ -2.37
ERVFC1-1P60608 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
ERVFC1-1P60608 SNORA33.1-201ENST00000364957 130 ntBASIC0.23□□□□□ -2.37
ERVFC1-1P60608 RNU6-1036P-201ENST00000383959 104 ntBASIC0.22□□□□□ -2.37
ERVFC1-1P60608 SNORD116-24-201ENST00000384549 92 ntBASIC0.22□□□□□ -2.37
ERVFC1-1P60608 MIR521-2-201ENST00000384818 87 ntBASIC0.22□□□□□ -2.37
ERVFC1-1P60608 SNORA75.1-201ENST00000391130 148 ntBASIC0.22□□□□□ -2.37
ERVFC1-1P60608 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
ERVFC1-1P60608 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
ERVFC1-1P60608 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
ERVFC1-1P60608 Y_RNA.115-201ENST00000363272 98 ntBASIC0.21□□□□□ -2.38
ERVFC1-1P60608 RNA5SP457-201ENST00000363657 124 ntBASIC0.21□□□□□ -2.38
ERVFC1-1P60608 SNORA15B-2-201ENST00000384058 135 ntBASIC0.21□□□□□ -2.38
ERVFC1-1P60608 SNORA15B-1-201ENST00000384334 135 ntBASIC0.21□□□□□ -2.38
ERVFC1-1P60608 RNU6-871P-201ENST00000516122 100 ntBASIC0.21□□□□□ -2.38
ERVFC1-1P60608 MIR4514-201ENST00000581410 57 ntBASIC0.21□□□□□ -2.38
ERVFC1-1P60608 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
ERVFC1-1P60608 RNU6-1162P-201ENST00000384443 104 ntBASIC0.2□□□□□ -2.38
ERVFC1-1P60608 RNA5SP330-201ENST00000517096 96 ntBASIC0.2□□□□□ -2.38
ERVFC1-1P60608 AC090617.8-201ENST00000623339 167 ntBASIC0.2□□□□□ -2.38
ERVFC1-1P60608 RNU6-1216P-201ENST00000362590 107 ntBASIC0.19□□□□□ -2.38
ERVFC1-1P60608 RNU6-895P-201ENST00000384125 103 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms