Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-260P-201ENST00000384092 107 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 MIR590-201ENST00000385008 97 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 RNU6-881P-201ENST00000516813 102 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 YWHAEP3-201ENST00000582767 121 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.81□□□□□ -2.54
LIM2P55344 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 RNU6-30P-201ENST00000384561 107 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.82□□□□□ -2.54
LIM2P55344 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 RNU6-824P-201ENST00000363724 104 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 MIR1236-201ENST00000408340 102 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORD22.1-201ENST00000516331 125 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 MIR3681-201ENST00000580089 72 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 U6.96-201ENST00000636425 70 ntBASIC-0.83□□□□□ -2.54
LIM2P55344 SNORA62.4-201ENST00000365504 151 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU6-106P-201ENST00000384405 107 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU6-721P-201ENST00000410155 105 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 snoU13.17-201ENST00000458802 104 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU7-61P-201ENST00000515897 61 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 MIR4796-201ENST00000580742 81 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 MIR8068-201ENST00000618032 68 ntBASIC-0.84□□□□□ -2.54
LIM2P55344 RNU6-834P-201ENST00000362367 110 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 U6.81-201ENST00000612550 106 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 MIR4773-1-201ENST00000637203 78 ntBASIC-0.85□□□□□ -2.55
LIM2P55344 SNORA2.1-201ENST00000363089 137 ntBASIC-0.86□□□□□ -2.55
LIM2P55344 RNU6-554P-201ENST00000410466 106 ntBASIC-0.86□□□□□ -2.55
LIM2P55344 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.86□□□□□ -2.55
LIM2P55344 MIR6509-201ENST00000614603 85 ntBASIC-0.86□□□□□ -2.55
LIM2P55344 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 AC022137.1-201ENST00000483735 151 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 RNA5SP67-201ENST00000516422 131 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 MIR548AX-201ENST00000580117 73 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 AL365222.1-201ENST00000614661 98 ntBASIC-0.87□□□□□ -2.55
LIM2P55344 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.88□□□□□ -2.55
LIM2P55344 RNU6-274P-201ENST00000459566 107 ntBASIC-0.88□□□□□ -2.55
LIM2P55344 U7.3-201ENST00000616123 62 ntBASIC-0.88□□□□□ -2.55
LIM2P55344 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 AP000533.3-201ENST00000447704 118 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 AL691482.2-201ENST00000457453 84 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-109P-201ENST00000516364 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNA5SP470-201ENST00000516463 106 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-589P-201ENST00000516485 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-184P-201ENST00000516514 107 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 RNU6-158P-201ENST00000517104 100 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 MIR3657-201ENST00000584818 117 ntBASIC-0.89□□□□□ -2.55
LIM2P55344 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.9□□□□□ -2.55
LIM2P55344 MIR6129-201ENST00000616087 109 ntBASIC-0.9□□□□□ -2.55
LIM2P55344 AC090617.8-201ENST00000623339 167 ntBASIC-0.9□□□□□ -2.55
LIM2P55344 RNU6-208P-201ENST00000362431 107 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-766P-201ENST00000362478 107 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-905P-201ENST00000384434 107 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 SNORA19-201ENST00000384737 128 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.91□□□□□ -2.56
LIM2P55344 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 MIR203A-201ENST00000384836 110 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 MIR517B-201ENST00000385102 67 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 RNU6-162P-201ENST00000516228 103 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 RNU6-752P-201ENST00000516376 102 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 RNA5SP147-201ENST00000516493 109 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 AL353803.5-201ENST00000599815 141 ntBASIC-0.92□□□□□ -2.56
LIM2P55344 SNORA33.1-201ENST00000364957 130 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 RNU6-22P-201ENST00000384355 107 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 MT-TR-201ENST00000387439 65 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 MIR548M-201ENST00000408260 86 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 AL450471.1-201ENST00000447509 127 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
LIM2P55344 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.93□□□□□ -2.56
LIM2P55344 MTATP8P2-201ENST00000435212 202 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 SNORD18.2-201ENST00000459604 70 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 RNU7-153P-201ENST00000516455 62 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 MIR2052-201ENST00000636055 55 ntBASIC-0.94□□□□□ -2.56
LIM2P55344 MIR521-2-201ENST00000384818 87 ntBASIC-0.95□□□□□ -2.56
LIM2P55344 CYP3A54P-201ENST00000566950 75 ntBASIC-0.95□□□□□ -2.56
LIM2P55344 RNU6-681P-201ENST00000364012 104 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR519C-201ENST00000385053 87 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR1255B2-201ENST00000408618 67 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 RNU6-479P-201ENST00000516348 105 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR4464-201ENST00000580818 92 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 MIR6739-201ENST00000622461 75 ntBASIC-0.96□□□□□ -2.56
LIM2P55344 RNU6-340P-201ENST00000364005 107 ntBASIC-0.97□□□□□ -2.56
LIM2P55344 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.97□□□□□ -2.56
LIM2P55344 MIR124-2-201ENST00000385081 109 ntBASIC-0.97□□□□□ -2.56
LIM2P55344 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.98□□□□□ -2.57
LIM2P55344 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
LIM2P55344 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.98□□□□□ -2.57
LIM2P55344 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms