Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 U2.7-201ENST00000619197 100 ntBASIC1.59□□□□□ -2.15
PRIM1P49642 Y_RNA.125-201ENST00000363371 111 ntBASIC1.58□□□□□ -2.16
PRIM1P49642 RNU6-520P-201ENST00000384717 104 ntBASIC1.58□□□□□ -2.16
PRIM1P49642 MIR652-201ENST00000385278 98 ntBASIC1.58□□□□□ -2.16
PRIM1P49642 SNORD99-201ENST00000408612 74 ntBASIC1.58□□□□□ -2.16
PRIM1P49642 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.58□□□□□ -2.16
PRIM1P49642 MIR630-201ENST00000384957 97 ntBASIC1.57□□□□□ -2.16
PRIM1P49642 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
PRIM1P49642 RNA5SP436-201ENST00000516020 115 ntBASIC1.57□□□□□ -2.16
PRIM1P49642 RNA5SP94-201ENST00000516917 108 ntBASIC1.57□□□□□ -2.16
PRIM1P49642 MIR598-201ENST00000384868 97 ntBASIC1.56□□□□□ -2.16
PRIM1P49642 snoU13.13-201ENST00000458842 104 ntBASIC1.56□□□□□ -2.16
PRIM1P49642 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
PRIM1P49642 U7.6-201ENST00000610841 64 ntBASIC1.55□□□□□ -2.16
PRIM1P49642 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
PRIM1P49642 SNORA36.1-201ENST00000363424 132 ntBASIC1.54□□□□□ -2.16
PRIM1P49642 SNORA33.1-201ENST00000364957 130 ntBASIC1.54□□□□□ -2.16
PRIM1P49642 Y_RNA.374-201ENST00000365606 101 ntBASIC1.54□□□□□ -2.16
PRIM1P49642 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.54□□□□□ -2.16
PRIM1P49642 MIR4295-201ENST00000585286 85 ntBASIC1.53□□□□□ -2.16
PRIM1P49642 AC244090.1-201ENST00000441884 93 ntBASIC1.52□□□□□ -2.17
PRIM1P49642 AL021921.1-201ENST00000442774 93 ntBASIC1.52□□□□□ -2.17
PRIM1P49642 AC087343.1-201ENST00000477341 475 ntBASIC1.52□□□□□ -2.17
PRIM1P49642 MIR4473-201ENST00000583731 91 ntBASIC1.52□□□□□ -2.17
PRIM1P49642 MIR7107-201ENST00000611489 80 ntBASIC1.52□□□□□ -2.17
PRIM1P49642 MIR20A-201ENST00000362279 71 ntBASIC1.51□□□□□ -2.17
PRIM1P49642 RNU7-119P-201ENST00000459279 63 ntBASIC1.51□□□□□ -2.17
PRIM1P49642 RNU6-446P-201ENST00000362827 106 ntBASIC1.5□□□□□ -2.17
PRIM1P49642 MIR548E-201ENST00000408287 88 ntBASIC1.5□□□□□ -2.17
PRIM1P49642 U6.96-201ENST00000636425 70 ntBASIC1.49□□□□□ -2.17
PRIM1P49642 Y_RNA.246-201ENST00000364495 108 ntBASIC1.48□□□□□ -2.17
PRIM1P49642 SNORA75.1-201ENST00000391130 148 ntBASIC1.48□□□□□ -2.17
PRIM1P49642 MIR4661-201ENST00000582720 75 ntBASIC1.48□□□□□ -2.17
PRIM1P49642 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
PRIM1P49642 MIR373-201ENST00000362273 69 ntBASIC1.47□□□□□ -2.17
PRIM1P49642 MIR548AE1-201ENST00000583292 70 ntBASIC1.47□□□□□ -2.17
PRIM1P49642 AL353765.1-201ENST00000605514 183 ntBASIC1.47□□□□□ -2.17
PRIM1P49642 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
PRIM1P49642 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.46□□□□□ -2.18
PRIM1P49642 RNA5SP222-201ENST00000411039 105 ntBASIC1.46□□□□□ -2.18
PRIM1P49642 U4.4-201ENST00000620626 117 ntBASIC1.46□□□□□ -2.18
PRIM1P49642 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
PRIM1P49642 CYP3A54P-201ENST00000566950 75 ntBASIC1.44□□□□□ -2.18
PRIM1P49642 AC243829.6-201ENST00000612652 106 ntBASIC1.44□□□□□ -2.18
PRIM1P49642 SNORD114-29-201ENST00000364819 70 ntBASIC1.43□□□□□ -2.18
PRIM1P49642 MIR582-201ENST00000365731 98 ntBASIC1.43□□□□□ -2.18
PRIM1P49642 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.43□□□□□ -2.18
PRIM1P49642 RNU6-848P-201ENST00000515948 107 ntBASIC1.42□□□□□ -2.18
PRIM1P49642 RNU6-617P-201ENST00000516147 107 ntBASIC1.42□□□□□ -2.18
PRIM1P49642 RNU6-473P-201ENST00000516164 107 ntBASIC1.42□□□□□ -2.18
PRIM1P49642 RNU6-1049P-201ENST00000516414 107 ntBASIC1.42□□□□□ -2.18
PRIM1P49642 MIR5000-201ENST00000577717 103 ntBASIC1.42□□□□□ -2.18
PRIM1P49642 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PRIM1P49642 MIR516B1-201ENST00000385211 90 ntBASIC1.4□□□□□ -2.19
PRIM1P49642 SNORA70.25-201ENST00000612741 95 ntBASIC1.4□□□□□ -2.19
PRIM1P49642 Y_RNA.178-201ENST00000363832 102 ntBASIC1.39□□□□□ -2.19
PRIM1P49642 RNU6-936P-201ENST00000384005 107 ntBASIC1.39□□□□□ -2.19
PRIM1P49642 RNU6-1184P-201ENST00000384588 108 ntBASIC1.39□□□□□ -2.19
PRIM1P49642 Y_RNA.74-201ENST00000362911 99 ntBASIC1.38□□□□□ -2.19
PRIM1P49642 MIR140-201ENST00000385282 100 ntBASIC1.38□□□□□ -2.19
PRIM1P49642 HMGN2P22-201ENST00000427588 175 ntBASIC1.38□□□□□ -2.19
PRIM1P49642 MIR3973-201ENST00000579824 107 ntBASIC1.38□□□□□ -2.19
PRIM1P49642 SNORD114-21-201ENST00000606412 72 ntBASIC1.38□□□□□ -2.19
PRIM1P49642 MIR7978-201ENST00000636158 59 ntBASIC1.38□□□□□ -2.19
PRIM1P49642 MIR1285-1-201ENST00000408593 84 ntBASIC1.37□□□□□ -2.19
PRIM1P49642 AC211469.2-201ENST00000605461 205 ntBASIC1.37□□□□□ -2.19
PRIM1P49642 SNORA2A-201ENST00000383885 135 ntBASIC1.36□□□□□ -2.19
PRIM1P49642 SNORD71-201ENST00000411292 86 ntBASIC1.36□□□□□ -2.19
PRIM1P49642 RNA5SP470-201ENST00000516463 106 ntBASIC1.36□□□□□ -2.19
PRIM1P49642 AC243829.3-201ENST00000622177 108 ntBASIC1.36□□□□□ -2.19
PRIM1P49642 MIR429-201ENST00000362106 83 ntBASIC1.35□□□□□ -2.19
PRIM1P49642 SNORA36.2-201ENST00000384004 127 ntBASIC1.35□□□□□ -2.19
PRIM1P49642 RNU6-518P-201ENST00000516056 96 ntBASIC1.35□□□□□ -2.19
PRIM1P49642 SNORA40.8-201ENST00000411034 126 ntBASIC1.34□□□□□ -2.19
PRIM1P49642 RNA5SP517-201ENST00000364724 117 ntBASIC1.33□□□□□ -2.2
PRIM1P49642 SNORD116-16-201ENST00000384533 92 ntBASIC1.33□□□□□ -2.2
PRIM1P49642 CYP3A137P-201ENST00000562436 69 ntBASIC1.33□□□□□ -2.2
PRIM1P49642 SNORD118-201ENST00000363593 134 ntBASIC1.32□□□□□ -2.2
PRIM1P49642 SNORD113-4-201ENST00000364802 75 ntBASIC1.32□□□□□ -2.2
PRIM1P49642 Y_RNA.325-201ENST00000365171 122 ntBASIC1.32□□□□□ -2.2
PRIM1P49642 RNU7-154P-201ENST00000516194 62 ntBASIC1.32□□□□□ -2.2
PRIM1P49642 AL590095.2-201ENST00000604136 117 ntBASIC1.32□□□□□ -2.2
PRIM1P49642 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PRIM1P49642 RNU4-38P-201ENST00000364472 129 ntBASIC1.31□□□□□ -2.2
PRIM1P49642 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
PRIM1P49642 RN7SL793P-201ENST00000583259 296 ntBASIC1.31□□□□□ -2.2
PRIM1P49642 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
PRIM1P49642 RNU6-110P-201ENST00000384508 104 ntBASIC1.3□□□□□ -2.2
PRIM1P49642 RNU6-229P-201ENST00000516614 102 ntBASIC1.3□□□□□ -2.2
PRIM1P49642 MIR4752-201ENST00000579672 72 ntBASIC1.3□□□□□ -2.2
PRIM1P49642 SNORA9.1-201ENST00000362412 131 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 SNORA41B-201ENST00000384785 128 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 MIR532-201ENST00000385025 91 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 MIR216A-201ENST00000385063 110 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 MIR527-201ENST00000385244 85 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 MIR1255B2-201ENST00000408618 67 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 AC069271.1-201ENST00000445577 156 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 RNU6-231P-201ENST00000517122 103 ntBASIC1.28□□□□□ -2.2
PRIM1P49642 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.28□□□□□ -2.2
PRIM1P49642 RNU1-29P-201ENST00000606574 126 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 281.5 ms