Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 MIR6509-201ENST00000614603 85 ntBASIC0.3□□□□□ -2.36
NPTX2P47972 AC084368.1-201ENST00000620935 65 ntBASIC0.3□□□□□ -2.36
NPTX2P47972 MIR1297-201ENST00000637311 77 ntBASIC0.3□□□□□ -2.36
NPTX2P47972 RNU6-990P-201ENST00000364385 104 ntBASIC0.29□□□□□ -2.36
NPTX2P47972 RNU6-857P-201ENST00000515893 110 ntBASIC0.29□□□□□ -2.36
NPTX2P47972 RNU6-330P-201ENST00000363015 107 ntBASIC0.28□□□□□ -2.36
NPTX2P47972 MIR203A-201ENST00000384836 110 ntBASIC0.28□□□□□ -2.36
NPTX2P47972 Y_RNA.685-201ENST00000516532 108 ntBASIC0.28□□□□□ -2.36
NPTX2P47972 SNORD114-29-201ENST00000364819 70 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 MIR582-201ENST00000365731 98 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 MIR643-201ENST00000385267 97 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 RNU6-1275P-201ENST00000391087 107 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 MIR876-201ENST00000401147 81 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 RNU6-782P-201ENST00000516852 104 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
NPTX2P47972 RNU6-260P-201ENST00000384092 107 ntBASIC0.26□□□□□ -2.37
NPTX2P47972 SNORA8.1-201ENST00000384250 140 ntBASIC0.26□□□□□ -2.37
NPTX2P47972 MIR548E-201ENST00000408287 88 ntBASIC0.26□□□□□ -2.37
NPTX2P47972 SCARNA18B-201ENST00000458806 135 ntBASIC0.26□□□□□ -2.37
NPTX2P47972 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
NPTX2P47972 SNORA40.17-201ENST00000517256 115 ntBASIC0.26□□□□□ -2.37
NPTX2P47972 MIR3657-201ENST00000584818 117 ntBASIC0.26□□□□□ -2.37
NPTX2P47972 MIR20A-201ENST00000362279 71 ntBASIC0.25□□□□□ -2.37
NPTX2P47972 AC244090.1-201ENST00000441884 93 ntBASIC0.25□□□□□ -2.37
NPTX2P47972 MIR924-201ENST00000638017 53 ntBASIC0.25□□□□□ -2.37
NPTX2P47972 RNU6-24P-201ENST00000384440 107 ntBASIC0.24□□□□□ -2.37
NPTX2P47972 SNORA75.1-201ENST00000391130 148 ntBASIC0.24□□□□□ -2.37
NPTX2P47972 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
NPTX2P47972 RNU6-175P-201ENST00000516896 107 ntBASIC0.24□□□□□ -2.37
NPTX2P47972 MIR3675-201ENST00000583661 73 ntBASIC0.24□□□□□ -2.37
NPTX2P47972 RN7SL660P-201ENST00000614852 299 ntBASIC0.24□□□□□ -2.37
NPTX2P47972 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
NPTX2P47972 Y_RNA.788-201ENST00000622394 112 ntBASIC0.23□□□□□ -2.37
NPTX2P47972 MIR548H2-201ENST00000408874 88 ntBASIC0.22□□□□□ -2.37
NPTX2P47972 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
NPTX2P47972 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
NPTX2P47972 MIR330-201ENST00000362196 94 ntBASIC0.21□□□□□ -2.38
NPTX2P47972 SNORA2.1-201ENST00000363089 137 ntBASIC0.21□□□□□ -2.38
NPTX2P47972 SNORA63.6-201ENST00000364921 119 ntBASIC0.21□□□□□ -2.38
NPTX2P47972 RNA5SP147-201ENST00000516493 109 ntBASIC0.21□□□□□ -2.38
NPTX2P47972 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
NPTX2P47972 AC104408.1-201ENST00000605241 170 ntBASIC0.2□□□□□ -2.38
NPTX2P47972 MIR664A-201ENST00000626086 82 ntBASIC0.2□□□□□ -2.38
NPTX2P47972 RNA5SP325-201ENST00000363756 130 ntBASIC0.19□□□□□ -2.38
NPTX2P47972 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
NPTX2P47972 snoU13.13-201ENST00000458842 104 ntBASIC0.19□□□□□ -2.38
NPTX2P47972 AC021146.9-201ENST00000512503 156 ntBASIC0.19□□□□□ -2.38
NPTX2P47972 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
NPTX2P47972 AC145423.2-201ENST00000610631 239 ntBASIC0.19□□□□□ -2.38
NPTX2P47972 MIR610-201ENST00000385139 96 ntBASIC0.18□□□□□ -2.38
NPTX2P47972 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
NPTX2P47972 MIR3134-201ENST00000579433 74 ntBASIC0.18□□□□□ -2.38
NPTX2P47972 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
NPTX2P47972 U7.4-201ENST00000614961 63 ntBASIC0.18□□□□□ -2.38
NPTX2P47972 Y_RNA.115-201ENST00000363272 98 ntBASIC0.17□□□□□ -2.38
NPTX2P47972 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
NPTX2P47972 RNU6-1036P-201ENST00000383959 104 ntBASIC0.17□□□□□ -2.38
NPTX2P47972 SNORA49-201ENST00000386157 136 ntBASIC0.17□□□□□ -2.38
NPTX2P47972 Y_RNA.681-201ENST00000516445 113 ntBASIC0.17□□□□□ -2.38
NPTX2P47972 RNA5SP330-201ENST00000517096 96 ntBASIC0.17□□□□□ -2.38
NPTX2P47972 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
NPTX2P47972 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.17□□□□□ -2.38
NPTX2P47972 Y_RNA.244-201ENST00000364484 109 ntBASIC0.16□□□□□ -2.38
NPTX2P47972 Y_RNA.250-201ENST00000364542 110 ntBASIC0.16□□□□□ -2.38
NPTX2P47972 MIR593-201ENST00000384856 100 ntBASIC0.16□□□□□ -2.38
NPTX2P47972 MIR892B-201ENST00000401279 77 ntBASIC0.16□□□□□ -2.38
NPTX2P47972 RNU6-70P-201ENST00000516438 60 ntBASIC0.16□□□□□ -2.38
NPTX2P47972 MIR6514-201ENST00000622549 70 ntBASIC0.16□□□□□ -2.38
NPTX2P47972 SNORD45.1-201ENST00000363181 77 ntBASIC0.15□□□□□ -2.39
NPTX2P47972 MIR106A-201ENST00000384870 81 ntBASIC0.15□□□□□ -2.39
NPTX2P47972 RNU6-604P-201ENST00000390917 100 ntBASIC0.15□□□□□ -2.39
NPTX2P47972 RNA5SP163-201ENST00000410304 99 ntBASIC0.15□□□□□ -2.39
NPTX2P47972 Y_RNA.633-201ENST00000459107 95 ntBASIC0.15□□□□□ -2.39
NPTX2P47972 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
NPTX2P47972 RNA5SP457-201ENST00000363657 124 ntBASIC0.14□□□□□ -2.39
NPTX2P47972 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
NPTX2P47972 MIR145-201ENST00000384967 88 ntBASIC0.14□□□□□ -2.39
NPTX2P47972 SNORD2-201ENST00000459163 69 ntBASIC0.14□□□□□ -2.39
NPTX2P47972 MIR4743-201ENST00000584576 69 ntBASIC0.14□□□□□ -2.39
NPTX2P47972 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
NPTX2P47972 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
NPTX2P47972 RNU6-180P-201ENST00000516697 61 ntBASIC0.13□□□□□ -2.39
NPTX2P47972 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.13□□□□□ -2.39
NPTX2P47972 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.13□□□□□ -2.39
NPTX2P47972 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.13□□□□□ -2.39
NPTX2P47972 SNORD114-5-201ENST00000362928 70 ntBASIC0.12□□□□□ -2.39
NPTX2P47972 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
NPTX2P47972 RNA5SP63-201ENST00000391225 112 ntBASIC0.12□□□□□ -2.39
NPTX2P47972 CR383656.4-201ENST00000546909 122 ntBASIC0.12□□□□□ -2.39
NPTX2P47972 AL109933.3-201ENST00000619095 188 ntBASIC0.12□□□□□ -2.39
NPTX2P47972 MIR6739-201ENST00000622461 75 ntBASIC0.12□□□□□ -2.39
NPTX2P47972 RNU6-1241P-201ENST00000384536 107 ntBASIC0.11□□□□□ -2.39
NPTX2P47972 MIR889-201ENST00000401280 79 ntBASIC0.11□□□□□ -2.39
NPTX2P47972 RNU6-638P-201ENST00000516582 104 ntBASIC0.11□□□□□ -2.39
NPTX2P47972 SNORD115-22-201ENST00000364456 82 ntBASIC0.1□□□□□ -2.39
NPTX2P47972 SNORA15B-2-201ENST00000384058 135 ntBASIC0.1□□□□□ -2.39
NPTX2P47972 SNORA15B-1-201ENST00000384334 135 ntBASIC0.1□□□□□ -2.39
NPTX2P47972 RNU6-411P-201ENST00000384451 107 ntBASIC0.1□□□□□ -2.39
NPTX2P47972 RNU6-587P-201ENST00000391282 106 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms