Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MIR4490-201ENST00000582647 84 ntBASIC1.39□□□□□ -2.19
CHRNA4P43681 MIR1255B2-201ENST00000408618 67 ntBASIC1.38□□□□□ -2.19
CHRNA4P43681 MIR3612-201ENST00000579753 87 ntBASIC1.38□□□□□ -2.19
CHRNA4P43681 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.38□□□□□ -2.19
CHRNA4P43681 AC243829.6-201ENST00000612652 106 ntBASIC1.38□□□□□ -2.19
CHRNA4P43681 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
CHRNA4P43681 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHRNA4P43681 SNORD110-201ENST00000408189 75 ntBASIC1.37□□□□□ -2.19
CHRNA4P43681 RNA5SP480-201ENST00000516840 109 ntBASIC1.37□□□□□ -2.19
CHRNA4P43681 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.37□□□□□ -2.19
CHRNA4P43681 FABP5P4-201ENST00000437203 171 ntBASIC1.36□□□□□ -2.19
CHRNA4P43681 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
CHRNA4P43681 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
CHRNA4P43681 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
CHRNA4P43681 RNA5SP227-201ENST00000516184 113 ntBASIC1.35□□□□□ -2.19
CHRNA4P43681 RNU7-154P-201ENST00000516194 62 ntBASIC1.35□□□□□ -2.19
CHRNA4P43681 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
CHRNA4P43681 MIR548AG1-201ENST00000579932 66 ntBASIC1.35□□□□□ -2.19
CHRNA4P43681 Y_RNA.109-201ENST00000363215 102 ntBASIC1.34□□□□□ -2.19
CHRNA4P43681 Y_RNA.540-201ENST00000384638 111 ntBASIC1.34□□□□□ -2.19
CHRNA4P43681 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CHRNA4P43681 MIR429-201ENST00000362106 83 ntBASIC1.33□□□□□ -2.2
CHRNA4P43681 RNU6-924P-201ENST00000362926 108 ntBASIC1.33□□□□□ -2.2
CHRNA4P43681 AC244090.1-201ENST00000441884 93 ntBASIC1.33□□□□□ -2.2
CHRNA4P43681 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.33□□□□□ -2.2
CHRNA4P43681 MIR4421-201ENST00000578133 69 ntBASIC1.33□□□□□ -2.2
CHRNA4P43681 RNU6-724P-201ENST00000390958 105 ntBASIC1.32□□□□□ -2.2
CHRNA4P43681 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.32□□□□□ -2.2
CHRNA4P43681 RNU7-160P-201ENST00000516660 62 ntBASIC1.32□□□□□ -2.2
CHRNA4P43681 RNA5SP102-201ENST00000516865 106 ntBASIC1.32□□□□□ -2.2
CHRNA4P43681 AC025627.3-201ENST00000582078 182 ntBASIC1.32□□□□□ -2.2
CHRNA4P43681 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
CHRNA4P43681 SNORD115-25-201ENST00000362619 82 ntBASIC1.31□□□□□ -2.2
CHRNA4P43681 SNORA36.1-201ENST00000363424 132 ntBASIC1.31□□□□□ -2.2
CHRNA4P43681 SNORA25-201ENST00000384384 134 ntBASIC1.31□□□□□ -2.2
CHRNA4P43681 MIR20A-201ENST00000362279 71 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 RNU6-986P-201ENST00000363133 102 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 SNORD114-26-201ENST00000363543 72 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 RNU6-458P-201ENST00000384179 107 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 RNU6-696P-201ENST00000390834 107 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 RNU6-337P-201ENST00000391243 106 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 RNU6-1206P-201ENST00000516339 103 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 RNA5SP268-201ENST00000516828 124 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 MIR548AL-201ENST00000578416 97 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 U6.58-201ENST00000613107 107 ntBASIC1.3□□□□□ -2.2
CHRNA4P43681 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
CHRNA4P43681 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CHRNA4P43681 SNORD2-201ENST00000459163 69 ntBASIC1.29□□□□□ -2.2
CHRNA4P43681 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
CHRNA4P43681 SNORA70.25-201ENST00000612741 95 ntBASIC1.29□□□□□ -2.2
CHRNA4P43681 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
CHRNA4P43681 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CHRNA4P43681 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
CHRNA4P43681 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CHRNA4P43681 RNA5SP470-201ENST00000516463 106 ntBASIC1.28□□□□□ -2.2
CHRNA4P43681 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
CHRNA4P43681 MIR7107-201ENST00000611489 80 ntBASIC1.28□□□□□ -2.2
CHRNA4P43681 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
CHRNA4P43681 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
CHRNA4P43681 HMGN2P22-201ENST00000427588 175 ntBASIC1.27□□□□□ -2.21
CHRNA4P43681 MIR6773-201ENST00000612812 74 ntBASIC1.27□□□□□ -2.21
CHRNA4P43681 MIR18A-201ENST00000362310 71 ntBASIC1.26□□□□□ -2.21
CHRNA4P43681 Y_RNA.69-201ENST00000362885 109 ntBASIC1.26□□□□□ -2.21
CHRNA4P43681 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
CHRNA4P43681 MIR6515-201ENST00000619843 57 ntBASIC1.25□□□□□ -2.21
CHRNA4P43681 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
CHRNA4P43681 MIR579-201ENST00000385221 98 ntBASIC1.24□□□□□ -2.21
CHRNA4P43681 RNU4-45P-201ENST00000365469 141 ntBASIC1.23□□□□□ -2.21
CHRNA4P43681 MIRLET7B-201ENST00000385140 83 ntBASIC1.23□□□□□ -2.21
CHRNA4P43681 SNORA49-201ENST00000386157 136 ntBASIC1.23□□□□□ -2.21
CHRNA4P43681 RNA5SP94-201ENST00000516917 108 ntBASIC1.23□□□□□ -2.21
CHRNA4P43681 RNU7-151P-201ENST00000516930 53 ntBASIC1.23□□□□□ -2.21
CHRNA4P43681 MIR5706-201ENST00000579841 80 ntBASIC1.23□□□□□ -2.21
CHRNA4P43681 AC022709.1-201ENST00000615967 87 ntBASIC1.23□□□□□ -2.21
CHRNA4P43681 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CHRNA4P43681 RNU6-598P-201ENST00000364017 105 ntBASIC1.22□□□□□ -2.21
CHRNA4P43681 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CHRNA4P43681 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
CHRNA4P43681 SNORD124-201ENST00000459577 104 ntBASIC1.22□□□□□ -2.21
CHRNA4P43681 RNU1-29P-201ENST00000606574 126 ntBASIC1.22□□□□□ -2.21
CHRNA4P43681 MIR6779-201ENST00000617283 64 ntBASIC1.22□□□□□ -2.21
CHRNA4P43681 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.22□□□□□ -2.21
CHRNA4P43681 AL451105.1-201ENST00000450005 189 ntBASIC1.21□□□□□ -2.22
CHRNA4P43681 MIR4752-201ENST00000579672 72 ntBASIC1.21□□□□□ -2.22
CHRNA4P43681 U2.18-201ENST00000622185 84 ntBASIC1.21□□□□□ -2.22
CHRNA4P43681 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
CHRNA4P43681 SNORD114-29-201ENST00000364819 70 ntBASIC1.2□□□□□ -2.22
CHRNA4P43681 RNA5SP325-201ENST00000363756 130 ntBASIC1.19□□□□□ -2.22
CHRNA4P43681 RNU6-828P-201ENST00000364876 107 ntBASIC1.19□□□□□ -2.22
CHRNA4P43681 RNY1P8-201ENST00000383970 114 ntBASIC1.19□□□□□ -2.22
CHRNA4P43681 MIR329-2-201ENST00000385029 84 ntBASIC1.19□□□□□ -2.22
CHRNA4P43681 MIR125B1-201ENST00000385236 88 ntBASIC1.19□□□□□ -2.22
CHRNA4P43681 MIR598-201ENST00000384868 97 ntBASIC1.18□□□□□ -2.22
CHRNA4P43681 RNA5SP255-201ENST00000516370 107 ntBASIC1.18□□□□□ -2.22
CHRNA4P43681 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
CHRNA4P43681 AC011195.1-201ENST00000578177 177 ntBASIC1.18□□□□□ -2.22
CHRNA4P43681 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CHRNA4P43681 RNU6-502P-201ENST00000362419 108 ntBASIC1.17□□□□□ -2.22
CHRNA4P43681 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms