Protein–RNA interactions for Protein: P35498

SCN1A, Sodium channel protein type 1 subunit alpha, humanhuman

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1AP35498 MIR1468-201ENST00000410600 86 ntBASIC-0.73□□□□□ -2.53
SCN1AP35498 RNU6-274P-201ENST00000459566 107 ntBASIC-0.73□□□□□ -2.53
SCN1AP35498 SNORA18.5-201ENST00000516616 101 ntBASIC-0.73□□□□□ -2.53
SCN1AP35498 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
SCN1AP35498 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 AC022137.1-201ENST00000483735 151 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 AC021146.9-201ENST00000512503 156 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 RNU6-659P-201ENST00000516454 104 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.74□□□□□ -2.53
SCN1AP35498 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 RNU6-721P-201ENST00000410155 105 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 RNA5SP147-201ENST00000516493 109 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 RNY1P9-201ENST00000532431 109 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 MIR4796-201ENST00000580742 81 ntBASIC-0.74□□□□□ -2.53
SCN1AP35498 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.75□□□□□ -2.53
SCN1AP35498 RNU6-681P-201ENST00000364012 104 ntBASIC-0.75□□□□□ -2.53
SCN1AP35498 RNU6-704P-201ENST00000364162 103 ntBASIC-0.75□□□□□ -2.53
SCN1AP35498 SNORA24B-201ENST00000384176 131 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 SNORD116-21-201ENST00000384507 92 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.76□□□□□ -2.53
SCN1AP35498 AC008267.6-201ENST00000441664 139 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 MIR2052-201ENST00000636055 55 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 RNY1P7-201ENST00000384743 110 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 AC090617.8-201ENST00000623339 167 ntBASIC-0.76□□□□□ -2.53
SCN1AP35498 SNORD115-37-201ENST00000363768 82 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 RNU6-904P-201ENST00000516206 101 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 RNU6-990P-201ENST00000364385 104 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 MIR519C-201ENST00000385053 87 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 MIR601-201ENST00000385256 79 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 RNA5SP169-201ENST00000517268 117 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 AC012531.4-201ENST00000616509 177 ntBASIC-0.77□□□□□ -2.53
SCN1AP35498 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.77□□□□□ -2.53
SCN1AP35498 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.78□□□□□ -2.53
SCN1AP35498 SNORD116-14-201ENST00000383894 92 ntBASIC-0.78□□□□□ -2.53
SCN1AP35498 SNORD116-17-201ENST00000383929 92 ntBASIC-0.78□□□□□ -2.53
SCN1AP35498 SNORD116-15-201ENST00000384445 92 ntBASIC-0.78□□□□□ -2.53
SCN1AP35498 SNORD116-19-201ENST00000384729 92 ntBASIC-0.78□□□□□ -2.53
SCN1AP35498 CYP3A54P-201ENST00000566950 75 ntBASIC-0.78□□□□□ -2.53
SCN1AP35498 MIR4723-201ENST00000585070 81 ntBASIC-0.78□□□□□ -2.53
SCN1AP35498 SNORD114-25-201ENST00000363742 72 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 MIR548M-201ENST00000408260 86 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 MIR1255B2-201ENST00000408618 67 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 RNU6-592P-201ENST00000411333 103 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 MIR4773-1-201ENST00000637203 78 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 RNU6-208P-201ENST00000362431 107 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 SNORD74.6-201ENST00000364796 70 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 RNU6-382P-201ENST00000365181 106 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 MIR517B-201ENST00000385102 67 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 AC104996.3-201ENST00000590718 94 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 AC006254.2-201ENST00000603259 279 ntBASIC-0.79□□□□□ -2.54
SCN1AP35498 SNORA33.1-201ENST00000364957 130 ntBASIC-0.8□□□□□ -2.54
SCN1AP35498 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.8□□□□□ -2.54
SCN1AP35498 RNU6-554P-201ENST00000410466 106 ntBASIC-0.8□□□□□ -2.54
SCN1AP35498 RNU6-106P-201ENST00000384405 107 ntBASIC-0.81□□□□□ -2.54
SCN1AP35498 RNU7-154P-201ENST00000516194 62 ntBASIC-0.81□□□□□ -2.54
SCN1AP35498 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.81□□□□□ -2.54
SCN1AP35498 AC140658.3-201ENST00000567603 271 ntBASIC-0.81□□□□□ -2.54
SCN1AP35498 RNU6-824P-201ENST00000363724 104 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 RNU6-24P-201ENST00000384440 107 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 MIR590-201ENST00000385008 97 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 SNORA62.4-201ENST00000365504 151 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 RNU6-746P-201ENST00000384112 109 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 MIR124-2-201ENST00000385081 109 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
SCN1AP35498 MIR1236-201ENST00000408340 102 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 AL035461.1-201ENST00000421490 332 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 MIR4499-201ENST00000584834 69 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 U7.3-201ENST00000616123 62 ntBASIC-0.82□□□□□ -2.54
SCN1AP35498 RNU6-624P-201ENST00000363411 107 ntBASIC-0.83□□□□□ -2.54
SCN1AP35498 U6.96-201ENST00000636425 70 ntBASIC-0.83□□□□□ -2.54
SCN1AP35498 SNORD115-27-201ENST00000364430 82 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 MIR3681-201ENST00000580089 72 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 AL445584.3-201ENST00000617173 78 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 SNORA2.1-201ENST00000363089 137 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 SNORA19-201ENST00000384737 128 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 MIR521-2-201ENST00000384818 87 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 MIR198-201ENST00000637333 62 ntBASIC-0.84□□□□□ -2.54
SCN1AP35498 RNU6-22P-201ENST00000384355 107 ntBASIC-0.85□□□□□ -2.55
SCN1AP35498 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.85□□□□□ -2.55
SCN1AP35498 SNORD64-201ENST00000386683 67 ntBASIC-0.85□□□□□ -2.55
SCN1AP35498 RNU6-774P-201ENST00000363238 107 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 RNU6-431P-201ENST00000383874 107 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 MIR382-201ENST00000637119 76 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 RNA5SP192-201ENST00000364404 120 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.86□□□□□ -2.55
SCN1AP35498 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms