Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MIR4280-201ENST00000582178 76 ntBASIC-0.6□□□□□ -2.51
PTPN4P29074 RNU5F-1-201ENST00000362507 117 ntBASIC-0.61□□□□□ -2.51
PTPN4P29074 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
PTPN4P29074 RNA5SP266-201ENST00000410273 108 ntBASIC-0.61□□□□□ -2.51
PTPN4P29074 RNU6-479P-201ENST00000516348 105 ntBASIC-0.61□□□□□ -2.51
PTPN4P29074 U7.3-201ENST00000616123 62 ntBASIC-0.61□□□□□ -2.51
PTPN4P29074 RNU6-766P-201ENST00000362478 107 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 RNU6-162P-201ENST00000516228 103 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 AC006254.2-201ENST00000603259 279 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 MIR6773-201ENST00000612812 74 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 MIR6851-201ENST00000617060 67 ntBASIC-0.62□□□□□ -2.51
PTPN4P29074 RNU6-382P-201ENST00000365181 106 ntBASIC-0.63□□□□□ -2.51
PTPN4P29074 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.63□□□□□ -2.51
PTPN4P29074 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.63□□□□□ -2.51
PTPN4P29074 MIR4796-201ENST00000580742 81 ntBASIC-0.63□□□□□ -2.51
PTPN4P29074 MIR3910-1-201ENST00000580936 111 ntBASIC-0.63□□□□□ -2.51
PTPN4P29074 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
PTPN4P29074 AC132825.6-201ENST00000638861 357 ntBASIC-0.63□□□□□ -2.51
PTPN4P29074 snoU13.17-201ENST00000458802 104 ntBASIC-0.64□□□□□ -2.51
PTPN4P29074 AC021146.9-201ENST00000512503 156 ntBASIC-0.64□□□□□ -2.51
PTPN4P29074 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.64□□□□□ -2.51
PTPN4P29074 RNU6-313P-201ENST00000516317 112 ntBASIC-0.64□□□□□ -2.51
PTPN4P29074 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.64□□□□□ -2.51
PTPN4P29074 RNU6-824P-201ENST00000363724 104 ntBASIC-0.65□□□□□ -2.51
PTPN4P29074 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.65□□□□□ -2.51
PTPN4P29074 RNU6-337P-201ENST00000391243 106 ntBASIC-0.65□□□□□ -2.51
PTPN4P29074 MIR1236-201ENST00000408340 102 ntBASIC-0.65□□□□□ -2.51
PTPN4P29074 SNORD38.3-201ENST00000516599 73 ntBASIC-0.65□□□□□ -2.51
PTPN4P29074 RNU6-158P-201ENST00000517104 100 ntBASIC-0.65□□□□□ -2.51
PTPN4P29074 SNORD114-14-201ENST00000362723 75 ntBASIC-0.66□□□□□ -2.52
PTPN4P29074 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.66□□□□□ -2.52
PTPN4P29074 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.66□□□□□ -2.52
PTPN4P29074 MIRLET7B-201ENST00000385140 83 ntBASIC-0.66□□□□□ -2.52
PTPN4P29074 MIR204-201ENST00000385200 110 ntBASIC-0.66□□□□□ -2.52
PTPN4P29074 MIR4773-1-201ENST00000637203 78 ntBASIC-0.66□□□□□ -2.52
PTPN4P29074 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.67□□□□□ -2.52
PTPN4P29074 MIR5704-201ENST00000584029 77 ntBASIC-0.67□□□□□ -2.52
PTPN4P29074 MIR4436A-201ENST00000585278 85 ntBASIC-0.67□□□□□ -2.52
PTPN4P29074 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.67□□□□□ -2.52
PTPN4P29074 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 SNORD113-1-201ENST00000365321 69 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 SNORA3B-201ENST00000391305 131 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 RNU2-51P-201ENST00000410708 197 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 RNU6-592P-201ENST00000411333 103 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 MTATP8P2-201ENST00000435212 202 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 U6.81-201ENST00000612550 106 ntBASIC-0.68□□□□□ -2.52
PTPN4P29074 SNORD115-23-201ENST00000364461 82 ntBASIC-0.69□□□□□ -2.52
PTPN4P29074 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.69□□□□□ -2.52
PTPN4P29074 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.69□□□□□ -2.52
PTPN4P29074 RNU6-260P-201ENST00000384092 107 ntBASIC-0.69□□□□□ -2.52
PTPN4P29074 SNORA13-201ENST00000458790 133 ntBASIC-0.69□□□□□ -2.52
PTPN4P29074 snoR1.1-201ENST00000628177 80 ntBASIC-0.69□□□□□ -2.52
PTPN4P29074 AL031737.1-201ENST00000450125 223 ntBASIC-0.7□□□□□ -2.52
PTPN4P29074 RNU7-153P-201ENST00000516455 62 ntBASIC-0.7□□□□□ -2.52
PTPN4P29074 MIR6509-201ENST00000614603 85 ntBASIC-0.7□□□□□ -2.52
PTPN4P29074 SNORD115-27-201ENST00000364430 82 ntBASIC-0.71□□□□□ -2.52
PTPN4P29074 SNX3P1X-201ENST00000414887 175 ntBASIC-0.71□□□□□ -2.52
PTPN4P29074 RNU6-274P-201ENST00000459566 107 ntBASIC-0.71□□□□□ -2.52
PTPN4P29074 AC021146.6-201ENST00000514659 117 ntBASIC-0.71□□□□□ -2.52
PTPN4P29074 MIR6854-201ENST00000614935 69 ntBASIC-0.71□□□□□ -2.52
PTPN4P29074 U6.96-201ENST00000636425 70 ntBASIC-0.71□□□□□ -2.52
PTPN4P29074 MIR450A1-201ENST00000362262 91 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 SNORA2.1-201ENST00000363089 137 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 RNY1P7-201ENST00000384743 110 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 MIR203A-201ENST00000384836 110 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 MIR518B-201ENST00000385127 83 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 RNY4P18-201ENST00000391107 89 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 MIR8068-201ENST00000618032 68 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 MIR2052-201ENST00000636055 55 ntBASIC-0.72□□□□□ -2.52
PTPN4P29074 MIR587-201ENST00000384845 96 ntBASIC-0.73□□□□□ -2.53
PTPN4P29074 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.73□□□□□ -2.53
PTPN4P29074 AL691482.2-201ENST00000457453 84 ntBASIC-0.73□□□□□ -2.53
PTPN4P29074 RNA5SP147-201ENST00000516493 109 ntBASIC-0.73□□□□□ -2.53
PTPN4P29074 MIR3657-201ENST00000584818 117 ntBASIC-0.73□□□□□ -2.53
PTPN4P29074 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.73□□□□□ -2.53
PTPN4P29074 MIR6738-201ENST00000619620 64 ntBASIC-0.73□□□□□ -2.53
PTPN4P29074 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.74□□□□□ -2.53
PTPN4P29074 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.74□□□□□ -2.53
PTPN4P29074 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.74□□□□□ -2.53
PTPN4P29074 MIR519C-201ENST00000385053 87 ntBASIC-0.74□□□□□ -2.53
PTPN4P29074 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.74□□□□□ -2.53
PTPN4P29074 YWHAEP3-201ENST00000582767 121 ntBASIC-0.74□□□□□ -2.53
PTPN4P29074 AC090617.8-201ENST00000623339 167 ntBASIC-0.74□□□□□ -2.53
PTPN4P29074 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.75□□□□□ -2.53
PTPN4P29074 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.75□□□□□ -2.53
PTPN4P29074 RNU6-10P-201ENST00000384036 107 ntBASIC-0.75□□□□□ -2.53
PTPN4P29074 AL450471.1-201ENST00000447509 127 ntBASIC-0.75□□□□□ -2.53
PTPN4P29074 SCARNA17-201ENST00000516183 144 ntBASIC-0.75□□□□□ -2.53
PTPN4P29074 MIR4324-201ENST00000584846 72 ntBASIC-0.75□□□□□ -2.53
PTPN4P29074 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
PTPN4P29074 AL603908.1-201ENST00000406098 201 ntBASIC-0.76□□□□□ -2.53
PTPN4P29074 SNORD22.1-201ENST00000516331 125 ntBASIC-0.76□□□□□ -2.53
PTPN4P29074 MIR3179-1-201ENST00000578940 84 ntBASIC-0.76□□□□□ -2.53
PTPN4P29074 MIR3179-2-201ENST00000579107 84 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms