Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 SNORA24B-201ENST00000384176 131 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 SNORD56B-201ENST00000384713 71 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 RNU6-476P-201ENST00000384726 107 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 MIR1302-5-201ENST00000408164 150 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 RNU6-904P-201ENST00000516206 101 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 MIR4432-201ENST00000581823 84 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 snoR1.1-201ENST00000628177 80 ntBASIC-0.3□□□□□ -2.46
COL5A3P25940 SNORD116-10-201ENST00000363791 102 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 RNY4P7-201ENST00000364600 96 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 MIR518B-201ENST00000385127 83 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 AC097510.1-201ENST00000510945 133 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 SNORD38.3-201ENST00000516599 73 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 AC145423.2-201ENST00000610631 239 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 MIR8068-201ENST00000618032 68 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 MIR2052-201ENST00000636055 55 ntBASIC-0.31□□□□□ -2.46
COL5A3P25940 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 SNORD75.2-201ENST00000408784 58 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 AL606753.1-201ENST00000427435 87 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 MTATP8P2-201ENST00000435212 202 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 RNU7-55P-201ENST00000459426 62 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 MIR3910-1-201ENST00000580936 111 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 MIR548AZ-201ENST00000616567 95 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.32□□□□□ -2.46
COL5A3P25940 RNU6-681P-201ENST00000364012 104 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-880P-201ENST00000384526 107 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 MIRLET7B-201ENST00000385140 83 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-162P-201ENST00000516228 103 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-589P-201ENST00000516485 107 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 MIR4436A-201ENST00000585278 85 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 AC104996.3-201ENST00000590718 94 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 U7.3-201ENST00000616123 62 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 SNORD115-25-201ENST00000362619 82 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-554P-201ENST00000410466 106 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-109P-201ENST00000516364 107 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-184P-201ENST00000516514 107 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 MIR6773-201ENST00000612812 74 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 AC132825.6-201ENST00000638861 357 ntBASIC-0.33□□□□□ -2.46
COL5A3P25940 RNU6-834P-201ENST00000362367 110 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 RNY4P27-201ENST00000363341 96 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 RNU6-824P-201ENST00000363724 104 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 SNORD74.6-201ENST00000364796 70 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 RNU6-382P-201ENST00000365181 106 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 SNORA19-201ENST00000384737 128 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
COL5A3P25940 MIR1285-2-201ENST00000408311 88 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 RNA5SP147-201ENST00000516493 109 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 MIR4796-201ENST00000580742 81 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 AP001318.4-201ENST00000616637 121 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 MIR6851-201ENST00000617060 67 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 MIR6739-201ENST00000622461 75 ntBASIC-0.34□□□□□ -2.46
COL5A3P25940 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.34□□□□□ -2.46
COL5A3P25940 MIR519C-201ENST00000385053 87 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
COL5A3P25940 SNORD90-201ENST00000391145 111 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 RNU2-51P-201ENST00000410708 197 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 RNU6-274P-201ENST00000459566 107 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 RNU7-153P-201ENST00000516455 62 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 RNU6-624P-201ENST00000363411 107 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 MIR582-201ENST00000365731 98 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 SNORD116-22-201ENST00000384430 92 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 RNU6-905P-201ENST00000384434 107 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 RNU6-284P-201ENST00000411105 106 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 SNORD18.2-201ENST00000459604 70 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 SNORA40.17-201ENST00000517256 115 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 MIR3681-201ENST00000580089 72 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 MIR3657-201ENST00000584818 117 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 AC006254.2-201ENST00000603259 279 ntBASIC-0.35□□□□□ -2.47
COL5A3P25940 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 RNU6-990P-201ENST00000364385 104 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 SNORD115-27-201ENST00000364430 82 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 RNU6-973P-201ENST00000364690 107 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 RNU6-10P-201ENST00000384036 107 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
COL5A3P25940 AC090617.8-201ENST00000623339 167 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 MIR4773-1-201ENST00000637203 78 ntBASIC-0.36□□□□□ -2.47
COL5A3P25940 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 MIR521-2-201ENST00000384818 87 ntBASIC-0.37□□□□□ -2.47
COL5A3P25940 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
COL5A3P25940 SNORA3B-201ENST00000391305 131 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms