Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 SNORD114-26-201ENST00000363543 72 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 Y_RNA.250-201ENST00000364542 110 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 MIR1265-201ENST00000408444 86 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 HMGN2P22-201ENST00000427588 175 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 snoU13.13-201ENST00000458842 104 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 uc_338.10-201ENST00000621872 182 ntBASIC0.72□□□□□ -2.29
ZNF28P17035 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
ZNF28P17035 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
ZNF28P17035 MIR6779-201ENST00000617283 64 ntBASIC0.71□□□□□ -2.3
ZNF28P17035 MIR6739-201ENST00000622461 75 ntBASIC0.71□□□□□ -2.3
ZNF28P17035 SNORA63.6-201ENST00000364921 119 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 SNORA2A-201ENST00000383885 135 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 RNU6-471P-201ENST00000383944 106 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 MIR518A1-201ENST00000385068 85 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 RNU4-54P-201ENST00000516428 129 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 U7.6-201ENST00000610841 64 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 AL109933.3-201ENST00000619095 188 ntBASIC0.7□□□□□ -2.3
ZNF28P17035 Y_RNA.205-201ENST00000364128 113 ntBASIC0.69□□□□□ -2.3
ZNF28P17035 Y_RNA.423-201ENST00000384057 113 ntBASIC0.69□□□□□ -2.3
ZNF28P17035 RNU6-1162P-201ENST00000384443 104 ntBASIC0.69□□□□□ -2.3
ZNF28P17035 MIR548E-201ENST00000408287 88 ntBASIC0.69□□□□□ -2.3
ZNF28P17035 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
ZNF28P17035 RNU6-656P-201ENST00000516785 107 ntBASIC0.69□□□□□ -2.3
ZNF28P17035 Y_RNA.125-201ENST00000363371 111 ntBASIC0.68□□□□□ -2.3
ZNF28P17035 MIR582-201ENST00000365731 98 ntBASIC0.68□□□□□ -2.3
ZNF28P17035 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.67□□□□□ -2.3
ZNF28P17035 MIR521-2-201ENST00000384818 87 ntBASIC0.66□□□□□ -2.3
ZNF28P17035 RN7SL793P-201ENST00000583259 296 ntBASIC0.66□□□□□ -2.3
ZNF28P17035 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
ZNF28P17035 SNORA15B-2-201ENST00000384058 135 ntBASIC0.65□□□□□ -2.31
ZNF28P17035 SNORA15B-1-201ENST00000384334 135 ntBASIC0.65□□□□□ -2.31
ZNF28P17035 MIR216A-201ENST00000385063 110 ntBASIC0.65□□□□□ -2.31
ZNF28P17035 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
ZNF28P17035 AL157398.1-201ENST00000452981 186 ntBASIC0.65□□□□□ -2.31
ZNF28P17035 MIR6755-201ENST00000619993 66 ntBASIC0.65□□□□□ -2.31
ZNF28P17035 Y_RNA.375-201ENST00000365625 101 ntBASIC0.64□□□□□ -2.31
ZNF28P17035 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
ZNF28P17035 Y_RNA.633-201ENST00000459107 95 ntBASIC0.64□□□□□ -2.31
ZNF28P17035 RNU6-1232P-201ENST00000516299 86 ntBASIC0.64□□□□□ -2.31
ZNF28P17035 MIR4511-201ENST00000582784 87 ntBASIC0.64□□□□□ -2.31
ZNF28P17035 AC103706.3-201ENST00000636297 85 ntBASIC0.64□□□□□ -2.31
ZNF28P17035 MIR20A-201ENST00000362279 71 ntBASIC0.63□□□□□ -2.31
ZNF28P17035 SNORA33.1-201ENST00000364957 130 ntBASIC0.63□□□□□ -2.31
ZNF28P17035 MIR548C-201ENST00000384815 97 ntBASIC0.63□□□□□ -2.31
ZNF28P17035 MIR516B1-201ENST00000385211 90 ntBASIC0.63□□□□□ -2.31
ZNF28P17035 MIR760-201ENST00000390220 80 ntBASIC0.63□□□□□ -2.31
ZNF28P17035 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
ZNF28P17035 AC244090.1-201ENST00000441884 93 ntBASIC0.63□□□□□ -2.31
ZNF28P17035 MIR501-201ENST00000390204 84 ntBASIC0.62□□□□□ -2.31
ZNF28P17035 RNU6-848P-201ENST00000515948 107 ntBASIC0.62□□□□□ -2.31
ZNF28P17035 RNU6-617P-201ENST00000516147 107 ntBASIC0.62□□□□□ -2.31
ZNF28P17035 RNU6-473P-201ENST00000516164 107 ntBASIC0.62□□□□□ -2.31
ZNF28P17035 RNU6-1049P-201ENST00000516414 107 ntBASIC0.62□□□□□ -2.31
ZNF28P17035 RNU6-1089P-201ENST00000516473 104 ntBASIC0.62□□□□□ -2.31
ZNF28P17035 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ZNF28P17035 RNA5SP325-201ENST00000363756 130 ntBASIC0.61□□□□□ -2.31
ZNF28P17035 SNORD114-29-201ENST00000364819 70 ntBASIC0.61□□□□□ -2.31
ZNF28P17035 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
ZNF28P17035 RNU6-542P-201ENST00000516405 103 ntBASIC0.61□□□□□ -2.31
ZNF28P17035 MIR4677-201ENST00000584153 80 ntBASIC0.61□□□□□ -2.31
ZNF28P17035 RNA5SP215-201ENST00000363440 122 ntBASIC0.6□□□□□ -2.31
ZNF28P17035 RNU7-129P-201ENST00000516128 62 ntBASIC0.6□□□□□ -2.31
ZNF28P17035 RNU7-188P-201ENST00000517063 64 ntBASIC0.6□□□□□ -2.31
ZNF28P17035 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
ZNF28P17035 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
ZNF28P17035 RNA5SP299-201ENST00000391203 116 ntBASIC0.59□□□□□ -2.31
ZNF28P17035 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
ZNF28P17035 MIR548V-201ENST00000584165 80 ntBASIC0.59□□□□□ -2.31
ZNF28P17035 U6.96-201ENST00000636425 70 ntBASIC0.59□□□□□ -2.31
ZNF28P17035 RNA5SP128-201ENST00000365305 116 ntBASIC0.58□□□□□ -2.32
ZNF28P17035 MIR9-2-201ENST00000384838 87 ntBASIC0.58□□□□□ -2.32
ZNF28P17035 RNU6-863P-201ENST00000515989 104 ntBASIC0.58□□□□□ -2.32
ZNF28P17035 AC084368.1-201ENST00000620935 65 ntBASIC0.58□□□□□ -2.32
ZNF28P17035 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
ZNF28P17035 MIR548AD-201ENST00000584780 82 ntBASIC0.57□□□□□ -2.32
ZNF28P17035 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
ZNF28P17035 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
ZNF28P17035 RNU6-302P-201ENST00000365249 107 ntBASIC0.56□□□□□ -2.32
ZNF28P17035 SNORD2-201ENST00000459163 69 ntBASIC0.56□□□□□ -2.32
ZNF28P17035 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
ZNF28P17035 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
ZNF28P17035 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
ZNF28P17035 AC243829.6-201ENST00000612652 106 ntBASIC0.55□□□□□ -2.32
ZNF28P17035 U2.7-201ENST00000619197 100 ntBASIC0.55□□□□□ -2.32
ZNF28P17035 MIR499B-201ENST00000636498 73 ntBASIC0.55□□□□□ -2.32
ZNF28P17035 SCARNA21.1-201ENST00000515996 128 ntBASIC0.54□□□□□ -2.32
ZNF28P17035 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
ZNF28P17035 SNORD114-23-201ENST00000363536 72 ntBASIC0.53□□□□□ -2.32
ZNF28P17035 MIR517B-201ENST00000385102 67 ntBASIC0.53□□□□□ -2.32
ZNF28P17035 AC110620.1-201ENST00000416042 228 ntBASIC0.53□□□□□ -2.32
ZNF28P17035 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
ZNF28P17035 RNU6-175P-201ENST00000516896 107 ntBASIC0.53□□□□□ -2.32
ZNF28P17035 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
ZNF28P17035 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
ZNF28P17035 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
ZNF28P17035 RNU6-1036P-201ENST00000383959 104 ntBASIC0.51□□□□□ -2.33
ZNF28P17035 MIR193B-201ENST00000384907 83 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms