Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.67□□□□□ -2.52
RTN3O95197 MIR3179-4-201ENST00000617599 84 ntBASIC-0.67□□□□□ -2.52
RTN3O95197 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.68□□□□□ -2.52
RTN3O95197 SNORD58A-201ENST00000383875 65 ntBASIC-0.68□□□□□ -2.52
RTN3O95197 MIR518B-201ENST00000385127 83 ntBASIC-0.68□□□□□ -2.52
RTN3O95197 RNU6-62P-201ENST00000516526 102 ntBASIC-0.68□□□□□ -2.52
RTN3O95197 RNU4-32P-201ENST00000363404 141 ntBASIC-0.69□□□□□ -2.52
RTN3O95197 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.69□□□□□ -2.52
RTN3O95197 SNORD115-23-201ENST00000364461 82 ntBASIC-0.69□□□□□ -2.52
RTN3O95197 SNORA63.6-201ENST00000364921 119 ntBASIC-0.69□□□□□ -2.52
RTN3O95197 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.69□□□□□ -2.52
RTN3O95197 AL365222.1-201ENST00000614661 98 ntBASIC-0.69□□□□□ -2.52
RTN3O95197 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 MIR517B-201ENST00000385102 67 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.7□□□□□ -2.52
RTN3O95197 AP000533.3-201ENST00000447704 118 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 snoU13.17-201ENST00000458802 104 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 SNORA18.5-201ENST00000516616 101 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 RNU6-881P-201ENST00000516813 102 ntBASIC-0.7□□□□□ -2.52
RTN3O95197 SNORD114-25-201ENST00000363742 72 ntBASIC-0.71□□□□□ -2.52
RTN3O95197 SNORD116-10-201ENST00000363791 102 ntBASIC-0.71□□□□□ -2.52
RTN3O95197 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.71□□□□□ -2.52
RTN3O95197 AC021146.6-201ENST00000514659 117 ntBASIC-0.71□□□□□ -2.52
RTN3O95197 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.71□□□□□ -2.52
RTN3O95197 MIR4320-201ENST00000636981 65 ntBASIC-0.71□□□□□ -2.52
RTN3O95197 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.72□□□□□ -2.52
RTN3O95197 RNU6-382P-201ENST00000365181 106 ntBASIC-0.72□□□□□ -2.52
RTN3O95197 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.72□□□□□ -2.52
RTN3O95197 AC021146.9-201ENST00000512503 156 ntBASIC-0.72□□□□□ -2.52
RTN3O95197 RNU6-834P-201ENST00000362367 110 ntBASIC-0.73□□□□□ -2.53
RTN3O95197 RNU6-824P-201ENST00000363724 104 ntBASIC-0.73□□□□□ -2.53
RTN3O95197 MIR203A-201ENST00000384836 110 ntBASIC-0.73□□□□□ -2.53
RTN3O95197 SNORD75.2-201ENST00000408784 58 ntBASIC-0.73□□□□□ -2.53
RTN3O95197 MTATP6P29-201ENST00000415057 132 ntBASIC-0.73□□□□□ -2.53
RTN3O95197 AC022137.1-201ENST00000483735 151 ntBASIC-0.73□□□□□ -2.53
RTN3O95197 RNA5SP147-201ENST00000516493 109 ntBASIC-0.73□□□□□ -2.53
RTN3O95197 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 RNY1P7-201ENST00000384743 110 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 MIR590-201ENST00000385008 97 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 MIR124-2-201ENST00000385081 109 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 AL500527.2-201ENST00000454105 95 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 RNU6-537P-201ENST00000517277 103 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 AC026421.1-201ENST00000519101 163 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 MIR4464-201ENST00000580818 92 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 snoR1.1-201ENST00000628177 80 ntBASIC-0.74□□□□□ -2.53
RTN3O95197 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.74□□□□□ -2.53
RTN3O95197 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.74□□□□□ -2.53
RTN3O95197 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 RNU7-24P-201ENST00000458867 62 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 MIR6129-201ENST00000616087 109 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 MIR6738-201ENST00000619620 64 ntBASIC-0.75□□□□□ -2.53
RTN3O95197 RNU6-10P-201ENST00000384036 107 ntBASIC-0.76□□□□□ -2.53
RTN3O95197 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
RTN3O95197 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.76□□□□□ -2.53
RTN3O95197 RNU6-554P-201ENST00000410466 106 ntBASIC-0.76□□□□□ -2.53
RTN3O95197 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.76□□□□□ -2.53
RTN3O95197 U6.96-201ENST00000636425 70 ntBASIC-0.76□□□□□ -2.53
RTN3O95197 SNORA33.1-201ENST00000364957 130 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 RNU6-431P-201ENST00000383874 107 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 RNU6-22P-201ENST00000384355 107 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 RNU6-106P-201ENST00000384405 107 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 MIR196A1-201ENST00000388006 70 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 SNORA13-201ENST00000458790 133 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 YWHAEP3-201ENST00000582767 121 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 MIR4773-1-201ENST00000637203 78 ntBASIC-0.77□□□□□ -2.53
RTN3O95197 RNU6-208P-201ENST00000362431 107 ntBASIC-0.78□□□□□ -2.53
RTN3O95197 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.78□□□□□ -2.53
RTN3O95197 RNU6-260P-201ENST00000384092 107 ntBASIC-0.78□□□□□ -2.53
RTN3O95197 RNU7-61P-201ENST00000515897 61 ntBASIC-0.78□□□□□ -2.53
RTN3O95197 MIR6888-201ENST00000621977 67 ntBASIC-0.78□□□□□ -2.53
RTN3O95197 SNORD74.6-201ENST00000364796 70 ntBASIC-0.79□□□□□ -2.54
RTN3O95197 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.79□□□□□ -2.54
RTN3O95197 SNORD64-201ENST00000386683 67 ntBASIC-0.79□□□□□ -2.54
RTN3O95197 SNORD18.2-201ENST00000459604 70 ntBASIC-0.79□□□□□ -2.54
RTN3O95197 AL353803.5-201ENST00000599815 141 ntBASIC-0.79□□□□□ -2.54
RTN3O95197 U4.2-201ENST00000618561 85 ntBASIC-0.79□□□□□ -2.54
RTN3O95197 RNU5F-1-201ENST00000362507 117 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 RNU6-589P-201ENST00000516485 107 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 MIR3657-201ENST00000584818 117 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.8□□□□□ -2.54
RTN3O95197 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 SNORD114-17-201ENST00000364699 75 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 RNU6-162P-201ENST00000516228 103 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 RNU6-109P-201ENST00000516364 107 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 RNU7-153P-201ENST00000516455 62 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 RNU6-184P-201ENST00000516514 107 ntBASIC-0.81□□□□□ -2.54
RTN3O95197 MIR6509-201ENST00000614603 85 ntBASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 415.7 ms