Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC132825.6-201ENST00000638861 357 ntBASIC-1.97□□□□□ -2.72
LSM1O15116 RNU6-746P-201ENST00000384112 109 ntBASIC-1.98□□□□□ -2.73
LSM1O15116 RNU6-804P-201ENST00000384286 107 ntBASIC-1.98□□□□□ -2.73
LSM1O15116 AC004792.1-201ENST00000614523 137 ntBASIC-1.98□□□□□ -2.73
LSM1O15116 MIR4773-1-201ENST00000637203 78 ntBASIC-1.98□□□□□ -2.73
LSM1O15116 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.99□□□□□ -2.73
LSM1O15116 SNORD63.1-201ENST00000516178 80 ntBASIC-1.99□□□□□ -2.73
LSM1O15116 RNU6-196P-201ENST00000384315 107 ntBASIC-2□□□□□ -2.73
LSM1O15116 MIR203A-201ENST00000384836 110 ntBASIC-2□□□□□ -2.73
LSM1O15116 RNU7-154P-201ENST00000516194 62 ntBASIC-2□□□□□ -2.73
LSM1O15116 AL157777.2-201ENST00000258070 137 ntBASIC-2.01□□□□□ -2.73
LSM1O15116 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.01□□□□□ -2.73
LSM1O15116 RNU5F-1-201ENST00000362507 117 ntBASIC-2.01□□□□□ -2.73
LSM1O15116 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.01□□□□□ -2.73
LSM1O15116 RNA5SP272-201ENST00000516095 111 ntBASIC-2.01□□□□□ -2.73
LSM1O15116 U6.81-201ENST00000612550 106 ntBASIC-2.01□□□□□ -2.73
LSM1O15116 MIR6818-201ENST00000621576 65 ntBASIC-2.01□□□□□ -2.73
LSM1O15116 MIR521-2-201ENST00000384818 87 ntBASIC-2.02□□□□□ -2.73
LSM1O15116 SNX3P1X-201ENST00000414887 175 ntBASIC-2.02□□□□□ -2.73
LSM1O15116 MTND4LP9-201ENST00000427694 174 ntBASIC-2.02□□□□□ -2.73
LSM1O15116 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.02□□□□□ -2.73
LSM1O15116 RNA5SP180-201ENST00000516181 101 ntBASIC-2.02□□□□□ -2.73
LSM1O15116 RNU6-426P-201ENST00000516464 97 ntBASIC-2.03□□□□□ -2.73
LSM1O15116 MIR5591-201ENST00000578248 65 ntBASIC-2.03□□□□□ -2.73
LSM1O15116 RNU6-574P-201ENST00000384265 107 ntBASIC-2.04□□□□□ -2.74
LSM1O15116 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.04□□□□□ -2.74
LSM1O15116 AC012531.4-201ENST00000616509 177 ntBASIC-2.04□□□□□ -2.74
LSM1O15116 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.05□□□□□ -2.74
LSM1O15116 AL691482.2-201ENST00000457453 84 ntBASIC-2.05□□□□□ -2.74
LSM1O15116 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.05□□□□□ -2.74
LSM1O15116 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.05□□□□□ -2.74
LSM1O15116 RNU6-379P-201ENST00000363813 104 ntBASIC-2.06□□□□□ -2.74
LSM1O15116 RNA5SP331-201ENST00000364986 107 ntBASIC-2.06□□□□□ -2.74
LSM1O15116 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.06□□□□□ -2.74
LSM1O15116 RNU7-134P-201ENST00000458997 64 ntBASIC-2.06□□□□□ -2.74
LSM1O15116 RNU6-795P-201ENST00000516323 103 ntBASIC-2.06□□□□□ -2.74
LSM1O15116 MIR6739-201ENST00000622461 75 ntBASIC-2.06□□□□□ -2.74
LSM1O15116 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.07□□□□□ -2.74
LSM1O15116 RNU6-226P-201ENST00000363778 107 ntBASIC-2.07□□□□□ -2.74
LSM1O15116 SNORD115-22-201ENST00000364456 82 ntBASIC-2.07□□□□□ -2.74
LSM1O15116 SNORD58A-201ENST00000383875 65 ntBASIC-2.07□□□□□ -2.74
LSM1O15116 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.07□□□□□ -2.74
LSM1O15116 AL627230.5-201ENST00000619807 58 ntBASIC-2.07□□□□□ -2.74
LSM1O15116 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.08□□□□□ -2.74
LSM1O15116 MIR519A2-201ENST00000384990 87 ntBASIC-2.08□□□□□ -2.74
LSM1O15116 MIR8485-201ENST00000401372 91 ntBASIC-2.08□□□□□ -2.74
LSM1O15116 MTND5P41-201ENST00000517498 206 ntBASIC-2.08□□□□□ -2.74
LSM1O15116 MIR4770-201ENST00000579149 58 ntBASIC-2.08□□□□□ -2.74
LSM1O15116 MIR3914-2-201ENST00000637339 95 ntBASIC-2.09□□□□□ -2.74
LSM1O15116 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.1□□□□□ -2.75
LSM1O15116 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.1□□□□□ -2.75
LSM1O15116 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.1□□□□□ -2.75
LSM1O15116 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.11□□□□□ -2.75
LSM1O15116 RNU6-972P-201ENST00000391208 107 ntBASIC-2.11□□□□□ -2.75
LSM1O15116 RNU7-107P-201ENST00000459121 61 ntBASIC-2.11□□□□□ -2.75
LSM1O15116 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.11□□□□□ -2.75
LSM1O15116 MIR6129-201ENST00000616087 109 ntBASIC-2.11□□□□□ -2.75
LSM1O15116 RNU6-463P-201ENST00000384340 107 ntBASIC-2.12□□□□□ -2.75
LSM1O15116 MIR1246-201ENST00000636535 73 ntBASIC-2.12□□□□□ -2.75
LSM1O15116 RNA5SP26-201ENST00000362406 119 ntBASIC-2.13□□□□□ -2.75
LSM1O15116 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.13□□□□□ -2.75
LSM1O15116 AL353691.2-201ENST00000443795 59 ntBASIC-2.13□□□□□ -2.75
LSM1O15116 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.13□□□□□ -2.75
LSM1O15116 MIR4796-201ENST00000580742 81 ntBASIC-2.13□□□□□ -2.75
LSM1O15116 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 SNORA40-201ENST00000388090 126 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 RNU6-576P-201ENST00000390854 102 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 RNU6-887P-201ENST00000410660 100 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 RNU6-752P-201ENST00000516376 102 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 AL353621.2-201ENST00000605340 133 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 MIR198-201ENST00000637333 62 ntBASIC-2.14□□□□□ -2.75
LSM1O15116 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.15□□□□□ -2.75
LSM1O15116 RNU6-388P-201ENST00000517012 105 ntBASIC-2.15□□□□□ -2.75
LSM1O15116 RNU6-389P-201ENST00000517048 105 ntBASIC-2.15□□□□□ -2.75
LSM1O15116 MIR527-201ENST00000385244 85 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 MT-TG-201ENST00000387429 68 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 MIR1285-2-201ENST00000408311 88 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 RNU6-257P-201ENST00000410238 98 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 RNU4-61P-201ENST00000411243 107 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 RNU6-518P-201ENST00000516056 96 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 SNORD33.1-201ENST00000516213 88 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.16□□□□□ -2.76
LSM1O15116 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.17□□□□□ -2.76
LSM1O15116 AL021921.1-201ENST00000442774 93 ntBASIC-2.17□□□□□ -2.76
LSM1O15116 SCARNA23-201ENST00000516060 130 ntBASIC-2.17□□□□□ -2.76
LSM1O15116 RNU6-904P-201ENST00000516206 101 ntBASIC-2.17□□□□□ -2.76
LSM1O15116 SNORD116-10-201ENST00000363791 102 ntBASIC-2.19□□□□□ -2.76
LSM1O15116 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.19□□□□□ -2.76
LSM1O15116 SNORA19.1-201ENST00000410656 129 ntBASIC-2.19□□□□□ -2.76
LSM1O15116 RNU2-51P-201ENST00000410708 197 ntBASIC-2.19□□□□□ -2.76
LSM1O15116 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.2□□□□□ -2.76
LSM1O15116 RNU6-80P-201ENST00000384195 107 ntBASIC-2.2□□□□□ -2.76
LSM1O15116 RNU6-732P-201ENST00000516033 103 ntBASIC-2.2□□□□□ -2.76
LSM1O15116 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.2□□□□□ -2.76
LSM1O15116 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.2□□□□□ -2.76
LSM1O15116 RNU6-886P-201ENST00000384319 105 ntBASIC-2.21□□□□□ -2.76
LSM1O15116 MIR601-201ENST00000385256 79 ntBASIC-2.21□□□□□ -2.76
LSM1O15116 MIR889-201ENST00000401280 79 ntBASIC-2.21□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms