Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.82□□□□□ -2.7
TRAV38-1A0A0B4J264 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.82□□□□□ -2.7
TRAV38-1A0A0B4J264 MIR4777-201ENST00000583710 86 ntBASIC-1.82□□□□□ -2.7
TRAV38-1A0A0B4J264 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.82□□□□□ -2.7
TRAV38-1A0A0B4J264 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.83□□□□□ -2.7
TRAV38-1A0A0B4J264 RNU6-246P-201ENST00000384702 107 ntBASIC-1.83□□□□□ -2.7
TRAV38-1A0A0B4J264 AL078595.1-201ENST00000404458 226 ntBASIC-1.83□□□□□ -2.7
TRAV38-1A0A0B4J264 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.83□□□□□ -2.7
TRAV38-1A0A0B4J264 RNU6-861P-201ENST00000516745 106 ntBASIC-1.83□□□□□ -2.7
TRAV38-1A0A0B4J264 AC062037.2-201ENST00000610137 73 ntBASIC-1.83□□□□□ -2.7
TRAV38-1A0A0B4J264 MIR5683-201ENST00000636514 76 ntBASIC-1.83□□□□□ -2.7
TRAV38-1A0A0B4J264 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.84□□□□□ -2.7
TRAV38-1A0A0B4J264 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.84□□□□□ -2.7
TRAV38-1A0A0B4J264 AL021921.1-201ENST00000442774 93 ntBASIC-1.84□□□□□ -2.7
TRAV38-1A0A0B4J264 U7.5-201ENST00000517224 61 ntBASIC-1.84□□□□□ -2.7
TRAV38-1A0A0B4J264 MIR4490-201ENST00000582647 84 ntBASIC-1.84□□□□□ -2.7
TRAV38-1A0A0B4J264 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.85□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR601-201ENST00000385256 79 ntBASIC-1.85□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.85□□□□□ -2.71
TRAV38-1A0A0B4J264 RNU7-88P-201ENST00000458752 63 ntBASIC-1.85□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR548X2-201ENST00000579776 100 ntBASIC-1.85□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR6129-201ENST00000616087 109 ntBASIC-1.85□□□□□ -2.71
TRAV38-1A0A0B4J264 RNU6-682P-201ENST00000363843 106 ntBASIC-1.86□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.86□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR568-201ENST00000385036 95 ntBASIC-1.86□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.86□□□□□ -2.71
TRAV38-1A0A0B4J264 AC008737.2-201ENST00000599446 118 ntBASIC-1.86□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.87□□□□□ -2.71
TRAV38-1A0A0B4J264 AC090616.4-201ENST00000448026 115 ntBASIC-1.87□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR5009-201ENST00000578736 100 ntBASIC-1.87□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.88□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.88□□□□□ -2.71
TRAV38-1A0A0B4J264 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.88□□□□□ -2.71
TRAV38-1A0A0B4J264 RPL35AP4-201ENST00000412007 102 ntBASIC-1.88□□□□□ -2.71
TRAV38-1A0A0B4J264 MTCYBP9-201ENST00000431021 303 ntBASIC-1.88□□□□□ -2.71
TRAV38-1A0A0B4J264 RNU6-795P-201ENST00000516323 103 ntBASIC-1.88□□□□□ -2.71
TRAV38-1A0A0B4J264 AC012531.4-201ENST00000616509 177 ntBASIC-1.88□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.89□□□□□ -2.71
TRAV38-1A0A0B4J264 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.89□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR1468-201ENST00000410600 86 ntBASIC-1.89□□□□□ -2.71
TRAV38-1A0A0B4J264 RNU7-120P-201ENST00000459334 63 ntBASIC-1.89□□□□□ -2.71
TRAV38-1A0A0B4J264 RNU6-412P-201ENST00000516434 106 ntBASIC-1.89□□□□□ -2.71
TRAV38-1A0A0B4J264 SNORD58A-201ENST00000383875 65 ntBASIC-1.9□□□□□ -2.71
TRAV38-1A0A0B4J264 SNORD116-18-201ENST00000383961 92 ntBASIC-1.9□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR606-201ENST00000384851 96 ntBASIC-1.9□□□□□ -2.71
TRAV38-1A0A0B4J264 RNU6-168P-201ENST00000516189 101 ntBASIC-1.9□□□□□ -2.71
TRAV38-1A0A0B4J264 MIR569-201ENST00000385228 96 ntBASIC-1.91□□□□□ -2.72
TRAV38-1A0A0B4J264 AL118496.2-201ENST00000448300 230 ntBASIC-1.91□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-752P-201ENST00000516376 102 ntBASIC-1.91□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.91□□□□□ -2.72
TRAV38-1A0A0B4J264 MIR4796-201ENST00000580742 81 ntBASIC-1.91□□□□□ -2.72
TRAV38-1A0A0B4J264 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.92□□□□□ -2.72
TRAV38-1A0A0B4J264 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.92□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-394P-201ENST00000410735 107 ntBASIC-1.92□□□□□ -2.72
TRAV38-1A0A0B4J264 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.93□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-772P-201ENST00000516042 105 ntBASIC-1.93□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-656P-201ENST00000516785 107 ntBASIC-1.93□□□□□ -2.72
TRAV38-1A0A0B4J264 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.94□□□□□ -2.72
TRAV38-1A0A0B4J264 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.94□□□□□ -2.72
TRAV38-1A0A0B4J264 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
TRAV38-1A0A0B4J264 U2.7-201ENST00000619197 100 ntBASIC-1.94□□□□□ -2.72
TRAV38-1A0A0B4J264 AL157777.2-201ENST00000258070 137 ntBASIC-1.95□□□□□ -2.72
TRAV38-1A0A0B4J264 MIR1302-3-201ENST00000408128 138 ntBASIC-1.95□□□□□ -2.72
TRAV38-1A0A0B4J264 RNA5SP272-201ENST00000516095 111 ntBASIC-1.95□□□□□ -2.72
TRAV38-1A0A0B4J264 RNA5SP461-201ENST00000516451 104 ntBASIC-1.95□□□□□ -2.72
TRAV38-1A0A0B4J264 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.95□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.96□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-226P-201ENST00000363778 107 ntBASIC-1.96□□□□□ -2.72
TRAV38-1A0A0B4J264 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.96□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-972P-201ENST00000391208 107 ntBASIC-1.96□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-478P-201ENST00000363904 110 ntBASIC-1.97□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-340P-201ENST00000364005 107 ntBASIC-1.97□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-738P-201ENST00000384531 106 ntBASIC-1.97□□□□□ -2.72
TRAV38-1A0A0B4J264 RNA5SP86-201ENST00000390869 98 ntBASIC-1.97□□□□□ -2.72
TRAV38-1A0A0B4J264 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.97□□□□□ -2.72
TRAV38-1A0A0B4J264 RNU6-807P-201ENST00000516805 107 ntBASIC-1.97□□□□□ -2.72
TRAV38-1A0A0B4J264 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.97□□□□□ -2.72
TRAV38-1A0A0B4J264 MIR548Q-201ENST00000408404 100 ntBASIC-1.98□□□□□ -2.73
TRAV38-1A0A0B4J264 RNU6-887P-201ENST00000410660 100 ntBASIC-1.98□□□□□ -2.73
TRAV38-1A0A0B4J264 AC018880.2-201ENST00000414265 201 ntBASIC-1.98□□□□□ -2.73
TRAV38-1A0A0B4J264 RNU6-79P-201ENST00000362511 107 ntBASIC-1.99□□□□□ -2.73
TRAV38-1A0A0B4J264 RNU6-400P-201ENST00000391173 106 ntBASIC-1.99□□□□□ -2.73
TRAV38-1A0A0B4J264 AL450471.1-201ENST00000447509 127 ntBASIC-1.99□□□□□ -2.73
TRAV38-1A0A0B4J264 RNU6-804P-201ENST00000384286 107 ntBASIC-2□□□□□ -2.73
TRAV38-1A0A0B4J264 MIR1236-201ENST00000408340 102 ntBASIC-2□□□□□ -2.73
TRAV38-1A0A0B4J264 Y_RNA.603-201ENST00000410571 108 ntBASIC-2□□□□□ -2.73
TRAV38-1A0A0B4J264 Y_RNA.609-201ENST00000410669 89 ntBASIC-2□□□□□ -2.73
TRAV38-1A0A0B4J264 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2□□□□□ -2.73
TRAV38-1A0A0B4J264 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.01□□□□□ -2.73
TRAV38-1A0A0B4J264 MIR548H1-201ENST00000408610 102 ntBASIC-2.01□□□□□ -2.73
TRAV38-1A0A0B4J264 AL035461.1-201ENST00000421490 332 ntBASIC-2.01□□□□□ -2.73
TRAV38-1A0A0B4J264 MTND4LP9-201ENST00000427694 174 ntBASIC-2.01□□□□□ -2.73
TRAV38-1A0A0B4J264 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.02□□□□□ -2.73
TRAV38-1A0A0B4J264 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.02□□□□□ -2.73
TRAV38-1A0A0B4J264 SCARNA23-201ENST00000516060 130 ntBASIC-2.02□□□□□ -2.73
TRAV38-1A0A0B4J264 RNA5SP180-201ENST00000516181 101 ntBASIC-2.02□□□□□ -2.73
TRAV38-1A0A0B4J264 RNU7-153P-201ENST00000516455 62 ntBASIC-2.02□□□□□ -2.73
TRAV38-1A0A0B4J264 RNU6-426P-201ENST00000516464 97 ntBASIC-2.02□□□□□ -2.73
TRAV38-1A0A0B4J264 MIR3144-201ENST00000579460 79 ntBASIC-2.02□□□□□ -2.73
TRAV38-1A0A0B4J264 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.03□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms