Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MIR548Z-201ENST00000584743 97 ntBASIC-0.57□□□□□ -2.5
PCDHGA1Q9Y5H4 AC012531.4-201ENST00000616509 177 ntBASIC-0.57□□□□□ -2.5
PCDHGA1Q9Y5H4 RNU6-900P-201ENST00000384498 102 ntBASIC-0.58□□□□□ -2.5
PCDHGA1Q9Y5H4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
PCDHGA1Q9Y5H4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.58□□□□□ -2.5
PCDHGA1Q9Y5H4 RNU6-762P-201ENST00000517107 102 ntBASIC-0.58□□□□□ -2.5
PCDHGA1Q9Y5H4 AP000676.1-201ENST00000533307 52 ntBASIC-0.58□□□□□ -2.5
PCDHGA1Q9Y5H4 MIR3064-201ENST00000581130 66 ntBASIC-0.58□□□□□ -2.5
PCDHGA1Q9Y5H4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.58□□□□□ -2.5
PCDHGA1Q9Y5H4 SNORA63.2-201ENST00000362603 126 ntBASIC-0.59□□□□□ -2.5
PCDHGA1Q9Y5H4 RNU6-959P-201ENST00000384671 107 ntBASIC-0.59□□□□□ -2.5
PCDHGA1Q9Y5H4 SNORA49-201ENST00000386157 136 ntBASIC-0.59□□□□□ -2.5
PCDHGA1Q9Y5H4 SNORD42B-201ENST00000458893 67 ntBASIC-0.59□□□□□ -2.5
PCDHGA1Q9Y5H4 SCARNA23-201ENST00000516060 130 ntBASIC-0.6□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-904P-201ENST00000516206 101 ntBASIC-0.6□□□□□ -2.51
PCDHGA1Q9Y5H4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
PCDHGA1Q9Y5H4 AC104996.3-201ENST00000590718 94 ntBASIC-0.6□□□□□ -2.51
PCDHGA1Q9Y5H4 AC145423.2-201ENST00000610631 239 ntBASIC-0.6□□□□□ -2.51
PCDHGA1Q9Y5H4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.61□□□□□ -2.51
PCDHGA1Q9Y5H4 MT-TQ-201ENST00000387372 72 ntBASIC-0.61□□□□□ -2.51
PCDHGA1Q9Y5H4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
PCDHGA1Q9Y5H4 MIR548E-201ENST00000408287 88 ntBASIC-0.61□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-519P-201ENST00000410590 108 ntBASIC-0.61□□□□□ -2.51
PCDHGA1Q9Y5H4 MIR548AX-201ENST00000580117 73 ntBASIC-0.61□□□□□ -2.51
PCDHGA1Q9Y5H4 MIR582-201ENST00000365731 98 ntBASIC-0.62□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-972P-201ENST00000391208 107 ntBASIC-0.62□□□□□ -2.51
PCDHGA1Q9Y5H4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.62□□□□□ -2.51
PCDHGA1Q9Y5H4 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.62□□□□□ -2.51
PCDHGA1Q9Y5H4 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-81P-201ENST00000365608 104 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 SNORD58A-201ENST00000383875 65 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 MT-TR-201ENST00000387439 65 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 SNORA19.1-201ENST00000410656 129 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 AC008267.6-201ENST00000441664 139 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 MIR3140-201ENST00000583685 90 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 AL391099.1-201ENST00000624635 187 ntBASIC-0.63□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-62P-201ENST00000516526 102 ntBASIC-0.64□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-495P-201ENST00000362995 107 ntBASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 SNORA24B-201ENST00000384176 131 ntBASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU6-887P-201ENST00000410660 100 ntBASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 MIR4432-201ENST00000581823 84 ntBASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.65□□□□□ -2.51
PCDHGA1Q9Y5H4 AC114755.3-201ENST00000481111 251 ntBASIC-0.66□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORA40.17-201ENST00000517256 115 ntBASIC-0.66□□□□□ -2.52
PCDHGA1Q9Y5H4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.66□□□□□ -2.52
PCDHGA1Q9Y5H4 RNA5SP292-201ENST00000390974 118 ntBASIC-0.67□□□□□ -2.52
PCDHGA1Q9Y5H4 MIR1302-5-201ENST00000408164 150 ntBASIC-0.67□□□□□ -2.52
PCDHGA1Q9Y5H4 RNA5SP266-201ENST00000410273 108 ntBASIC-0.67□□□□□ -2.52
PCDHGA1Q9Y5H4 AL445193.1-201ENST00000441183 141 ntBASIC-0.67□□□□□ -2.52
PCDHGA1Q9Y5H4 AC093726.3-201ENST00000637588 150 ntBASIC-0.67□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.68□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-476P-201ENST00000384726 107 ntBASIC-0.68□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.68□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORA18.5-201ENST00000516616 101 ntBASIC-0.68□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-537P-201ENST00000517277 103 ntBASIC-0.68□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORD56B-201ENST00000384713 71 ntBASIC-0.69□□□□□ -2.52
PCDHGA1Q9Y5H4 snoU13.13-201ENST00000458842 104 ntBASIC-0.69□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU7-24P-201ENST00000458867 62 ntBASIC-0.69□□□□□ -2.52
PCDHGA1Q9Y5H4 AC097510.1-201ENST00000510945 133 ntBASIC-0.69□□□□□ -2.52
PCDHGA1Q9Y5H4 MIR4280-201ENST00000582178 76 ntBASIC-0.69□□□□□ -2.52
PCDHGA1Q9Y5H4 AL365222.1-201ENST00000614661 98 ntBASIC-0.69□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.7□□□□□ -2.52
PCDHGA1Q9Y5H4 MIR590-201ENST00000385008 97 ntBASIC-0.7□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.7□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.7□□□□□ -2.52
PCDHGA1Q9Y5H4 MTATP6P29-201ENST00000415057 132 ntBASIC-0.7□□□□□ -2.52
PCDHGA1Q9Y5H4 MIR548M-201ENST00000408260 86 ntBASIC-0.71□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORD57-201ENST00000448188 72 ntBASIC-0.71□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORD116-10-201ENST00000363791 102 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORD90-201ENST00000391145 111 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 SNORD75.2-201ENST00000408784 58 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.72□□□□□ -2.52
PCDHGA1Q9Y5H4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.73□□□□□ -2.53
PCDHGA1Q9Y5H4 RNU6-106P-201ENST00000384405 107 ntBASIC-0.73□□□□□ -2.53
PCDHGA1Q9Y5H4 AC026421.1-201ENST00000519101 163 ntBASIC-0.73□□□□□ -2.53
PCDHGA1Q9Y5H4 RNU4-32P-201ENST00000363404 141 ntBASIC-0.74□□□□□ -2.53
PCDHGA1Q9Y5H4 SNORA63.6-201ENST00000364921 119 ntBASIC-0.74□□□□□ -2.53
PCDHGA1Q9Y5H4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.74□□□□□ -2.53
PCDHGA1Q9Y5H4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.74□□□□□ -2.53
PCDHGA1Q9Y5H4 RNY1P9-201ENST00000532431 109 ntBASIC-0.74□□□□□ -2.53
PCDHGA1Q9Y5H4 RNU6-834P-201ENST00000362367 110 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 RNY1P7-201ENST00000384743 110 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 RNU6-554P-201ENST00000410466 106 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 RNU7-61P-201ENST00000515897 61 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 MIR4436A-201ENST00000585278 85 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 MIR6851-201ENST00000617060 67 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.75□□□□□ -2.53
PCDHGA1Q9Y5H4 MIR204-201ENST00000385200 110 ntBASIC-0.76□□□□□ -2.53
PCDHGA1Q9Y5H4 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms