Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MIR516B1-201ENST00000385211 90 ntBASIC0.15□□□□□ -2.39
PCDHGA3Q9Y5H0 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
PCDHGA3Q9Y5H0 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
PCDHGA3Q9Y5H0 RNU6-1052P-201ENST00000411398 104 ntBASIC0.14□□□□□ -2.39
PCDHGA3Q9Y5H0 RNU6-719P-201ENST00000516671 104 ntBASIC0.14□□□□□ -2.39
PCDHGA3Q9Y5H0 SNORD114-29-201ENST00000364819 70 ntBASIC0.13□□□□□ -2.39
PCDHGA3Q9Y5H0 Y_RNA.437-201ENST00000384113 113 ntBASIC0.13□□□□□ -2.39
PCDHGA3Q9Y5H0 Y_RNA.620-201ENST00000411009 88 ntBASIC0.13□□□□□ -2.39
PCDHGA3Q9Y5H0 RNU6-844P-201ENST00000517175 102 ntBASIC0.13□□□□□ -2.39
PCDHGA3Q9Y5H0 Y_RNA.433-201ENST00000384089 102 ntBASIC0.12□□□□□ -2.39
PCDHGA3Q9Y5H0 Y_RNA.558-201ENST00000384685 113 ntBASIC0.12□□□□□ -2.39
PCDHGA3Q9Y5H0 MIR643-201ENST00000385267 97 ntBASIC0.12□□□□□ -2.39
PCDHGA3Q9Y5H0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.12□□□□□ -2.39
PCDHGA3Q9Y5H0 AC104408.1-201ENST00000605241 170 ntBASIC0.12□□□□□ -2.39
PCDHGA3Q9Y5H0 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
PCDHGA3Q9Y5H0 RNU6-1177P-201ENST00000391058 104 ntBASIC0.11□□□□□ -2.39
PCDHGA3Q9Y5H0 MIR876-201ENST00000401147 81 ntBASIC0.11□□□□□ -2.39
PCDHGA3Q9Y5H0 RNY4P30-201ENST00000410216 95 ntBASIC0.11□□□□□ -2.39
PCDHGA3Q9Y5H0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.11□□□□□ -2.39
PCDHGA3Q9Y5H0 MIR5190-201ENST00000581537 80 ntBASIC0.11□□□□□ -2.39
PCDHGA3Q9Y5H0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
PCDHGA3Q9Y5H0 MIR3925-201ENST00000584674 77 ntBASIC0.1□□□□□ -2.39
PCDHGA3Q9Y5H0 MIR20A-201ENST00000362279 71 ntBASIC0.09□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-154P-201ENST00000384306 106 ntBASIC0.09□□□□□ -2.4
PCDHGA3Q9Y5H0 AC093729.1-201ENST00000513074 128 ntBASIC0.09□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR3140-201ENST00000583685 90 ntBASIC0.09□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-1131P-201ENST00000364955 107 ntBASIC0.08□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-1134P-201ENST00000365156 101 ntBASIC0.08□□□□□ -2.4
PCDHGA3Q9Y5H0 RNY1P7-201ENST00000384743 110 ntBASIC0.08□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-402P-201ENST00000410678 103 ntBASIC0.08□□□□□ -2.4
PCDHGA3Q9Y5H0 AC097510.1-201ENST00000510945 133 ntBASIC0.08□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
PCDHGA3Q9Y5H0 AC006254.2-201ENST00000603259 279 ntBASIC0.08□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-161P-201ENST00000363051 106 ntBASIC0.07□□□□□ -2.4
PCDHGA3Q9Y5H0 SNORA24B-201ENST00000384176 131 ntBASIC0.07□□□□□ -2.4
PCDHGA3Q9Y5H0 AC244090.1-201ENST00000441884 93 ntBASIC0.07□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU7-24P-201ENST00000458867 62 ntBASIC0.07□□□□□ -2.4
PCDHGA3Q9Y5H0 SNORD2-201ENST00000459163 69 ntBASIC0.07□□□□□ -2.4
PCDHGA3Q9Y5H0 RNA5SP285-201ENST00000516619 119 ntBASIC0.07□□□□□ -2.4
PCDHGA3Q9Y5H0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.07□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-219P-201ENST00000364728 107 ntBASIC0.06□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-54P-201ENST00000365563 107 ntBASIC0.06□□□□□ -2.4
PCDHGA3Q9Y5H0 SCARNA17.3-201ENST00000516381 125 ntBASIC0.06□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-495P-201ENST00000362995 107 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 Y_RNA.178-201ENST00000363832 102 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 Y_RNA.264-201ENST00000364665 102 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-675P-201ENST00000384236 104 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 AC104692.1-201ENST00000472406 90 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU7-153P-201ENST00000516455 62 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR548AE1-201ENST00000583292 70 ntBASIC0.05□□□□□ -2.4
PCDHGA3Q9Y5H0 SNORD115-27-201ENST00000364430 82 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR329-2-201ENST00000385029 84 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR652-201ENST00000385278 98 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU7-159P-201ENST00000459284 62 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 RNA5SP395-201ENST00000516567 118 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 CR383656.4-201ENST00000546909 122 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 IGLL4P-201ENST00000614590 133 ntBASIC0.04□□□□□ -2.4
PCDHGA3Q9Y5H0 Y_RNA.369-201ENST00000365568 117 ntBASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 SNORD75.2-201ENST00000408784 58 ntBASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 AL450471.1-201ENST00000447509 127 ntBASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 RNU7-188P-201ENST00000517063 64 ntBASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR1295B-201ENST00000636144 60 ntBASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
PCDHGA3Q9Y5H0 Y_RNA.17-201ENST00000362433 111 ntBASIC0.02□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-49P-201ENST00000384256 107 ntBASIC0.02□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR148A-201ENST00000362215 68 ntBASIC0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR106A-201ENST00000384870 81 ntBASIC0□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-592P-201ENST00000411333 103 ntBASIC0□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR548BB-201ENST00000626714 66 ntBASIC0□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-208P-201ENST00000362431 107 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-681P-201ENST00000364012 104 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 RNY1P1-201ENST00000364372 112 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-497P-201ENST00000365316 104 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 SNORD77.2-201ENST00000391045 68 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 SNORD90-201ENST00000391145 111 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR6514-201ENST00000622549 70 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR6759-201ENST00000638110 65 ntBASIC-0.01□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-294P-201ENST00000364999 102 ntBASIC-0.02□□□□□ -2.41
PCDHGA3Q9Y5H0 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.02□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-267P-201ENST00000516714 103 ntBASIC-0.02□□□□□ -2.41
PCDHGA3Q9Y5H0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-624P-201ENST00000363411 107 ntBASIC-0.03□□□□□ -2.41
PCDHGA3Q9Y5H0 snoU13.17-201ENST00000458802 104 ntBASIC-0.03□□□□□ -2.41
PCDHGA3Q9Y5H0 SNORD42B-201ENST00000458893 67 ntBASIC-0.03□□□□□ -2.41
PCDHGA3Q9Y5H0 RNU6-762P-201ENST00000517107 102 ntBASIC-0.03□□□□□ -2.41
PCDHGA3Q9Y5H0 AC140658.3-201ENST00000567603 271 ntBASIC-0.03□□□□□ -2.41
PCDHGA3Q9Y5H0 MIR5582-201ENST00000579697 68 ntBASIC-0.03□□□□□ -2.41
PCDHGA3Q9Y5H0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
PCDHGA3Q9Y5H0 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms