Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 MIR7978-201ENST00000636158 59 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 MIR302D-201ENST00000362275 68 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 SNORD114-23-201ENST00000363536 72 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 AL591704.2-201ENST00000421658 181 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 AC079150.2-201ENST00000443733 78 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 RN7SKP88-201ENST00000516847 250 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 7SK.8-201ENST00000612110 250 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 7SK.11-201ENST00000615477 250 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 AC244669.1-204ENST00000621564 178 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 7SK.13-201ENST00000622040 250 ntBASIC0.81□□□□□ -2.28
NOTCH3Q9UM47 SNORD114-4-201ENST00000363962 75 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 Y_RNA.250-201ENST00000364542 110 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 SNORD114-15-201ENST00000364687 72 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 SNORA2A-201ENST00000383885 135 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 RNU1-119P-201ENST00000391122 165 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 RNU6-808P-201ENST00000391233 108 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 RNU7-90P-201ENST00000459216 62 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 RNA5SP147-201ENST00000516493 109 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 SNORA44.1-201ENST00000517031 108 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 RNU6-92P-201ENST00000605893 104 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 MIR330-201ENST00000362196 94 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 RNU6-1162P-201ENST00000384443 104 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 MIR519E-201ENST00000385075 84 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 MT-TY-201ENST00000387409 66 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 SNORD89-201ENST00000390981 114 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
NOTCH3Q9UM47 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 MIR520F-201ENST00000384824 87 ntBASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 RPS29P23-201ENST00000458635 123 ntBASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 RNA5SP233-201ENST00000459153 113 ntBASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 RNA5SP67-201ENST00000516422 131 ntBASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 uc_338.16-201ENST00000621804 95 ntBASIC0.79□□□□□ -2.28
NOTCH3Q9UM47 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 MIR938-201ENST00000401216 83 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 MIR548L-201ENST00000408303 86 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 RNU7-104P-201ENST00000459398 79 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 MIR4639-201ENST00000584938 69 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 U4.4-201ENST00000620626 117 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 RNU6-446P-201ENST00000362827 106 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 Y_RNA.363-201ENST00000365529 113 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 RNU7-21P-201ENST00000459430 62 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 RNU6-135P-201ENST00000516769 101 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 MIR8063-201ENST00000621930 81 ntBASIC0.78□□□□□ -2.28
NOTCH3Q9UM47 RNU6-645P-201ENST00000364649 106 ntBASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 RNU6-936P-201ENST00000384005 107 ntBASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 RNU6-520P-201ENST00000384717 104 ntBASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 AL356379.1-201ENST00000414105 126 ntBASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 Y_RNA.722-201ENST00000517279 114 ntBASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 AC023827.1-201ENST00000569247 97 ntBASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 AC008608.1-201ENST00000603910 127 ntBASIC0.77□□□□□ -2.29
NOTCH3Q9UM47 RNA5SP299-201ENST00000391203 116 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 snoU13.13-201ENST00000458842 104 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 RNU7-174P-201ENST00000516248 59 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 SNORD114-21-201ENST00000606412 72 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 RNU6-54P-201ENST00000365563 107 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 SNORA15B-2-201ENST00000384058 135 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 SNORA15B-1-201ENST00000384334 135 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 SNORD28-201ENST00000384706 75 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 MIR329-2-201ENST00000385029 84 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 RNA5SP25-201ENST00000410815 110 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 AL136317.1-201ENST00000612653 226 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 MIR2909-201ENST00000617113 69 ntBASIC0.76□□□□□ -2.29
NOTCH3Q9UM47 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 RNU6-698P-201ENST00000363523 107 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 RNU6-34P-201ENST00000364874 107 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 Y_RNA.610-201ENST00000410681 103 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 IGLVI-20-201ENST00000519296 130 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 MIR1-1-201ENST00000362147 71 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 RNU6-1312P-201ENST00000362425 108 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 SNORA2.1-201ENST00000363089 137 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 SNORD113-4-201ENST00000364802 75 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 MIR521-2-201ENST00000384818 87 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 MIR30A-201ENST00000385092 71 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 SNORD41.1-201ENST00000391000 69 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 MIR1827-201ENST00000408549 66 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 SNORD79.1-201ENST00000516069 84 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 MIR4299-201ENST00000577899 72 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 MIR548O2-201ENST00000616090 70 ntBASIC0.75□□□□□ -2.29
NOTCH3Q9UM47 SNORD115-24-201ENST00000363528 82 ntBASIC0.74□□□□□ -2.29
NOTCH3Q9UM47 RNU1-78P-201ENST00000391248 165 ntBASIC0.74□□□□□ -2.29
NOTCH3Q9UM47 SNORD42B-201ENST00000458893 67 ntBASIC0.74□□□□□ -2.29
NOTCH3Q9UM47 RNU7-74P-201ENST00000459104 62 ntBASIC0.74□□□□□ -2.29
NOTCH3Q9UM47 RNA5SP134-201ENST00000516492 96 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 273.2 ms