Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SNORA8.2-201ENST00000384372 139 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 MIR517B-201ENST00000385102 67 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 MIR4303-201ENST00000581299 66 ntBASIC1.62□□□□□ -2.15
CUEDC1Q9NWM3 MIR630-201ENST00000384957 97 ntBASIC1.61□□□□□ -2.15
CUEDC1Q9NWM3 RNA5SP47-201ENST00000517230 109 ntBASIC1.61□□□□□ -2.15
CUEDC1Q9NWM3 uc_338.10-201ENST00000621872 182 ntBASIC1.61□□□□□ -2.15
CUEDC1Q9NWM3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 SNORD18A-201ENST00000363753 72 ntBASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 MIR548C-201ENST00000384815 97 ntBASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 RNA5SP220-201ENST00000516298 104 ntBASIC1.6□□□□□ -2.15
CUEDC1Q9NWM3 MIR618-201ENST00000385287 98 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 AC002429.1-201ENST00000437672 148 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 RNU7-174P-201ENST00000516248 59 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 U2.7-201ENST00000619197 100 ntBASIC1.59□□□□□ -2.15
CUEDC1Q9NWM3 RNU6-939P-201ENST00000384634 107 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP480-201ENST00000516840 109 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 MIR4452-201ENST00000583004 71 ntBASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.58□□□□□ -2.16
CUEDC1Q9NWM3 SNORD105-201ENST00000386910 85 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 U7.7-201ENST00000459276 60 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 AC021146.9-201ENST00000512503 156 ntBASIC1.57□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-269P-201ENST00000391077 97 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP404-201ENST00000517118 132 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-716P-201ENST00000365621 103 ntBASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CUEDC1Q9NWM3 Y_RNA.379-201ENST00000365653 102 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 RNU7-119P-201ENST00000459279 63 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 U4.4-201ENST00000620626 117 ntBASIC1.54□□□□□ -2.16
CUEDC1Q9NWM3 RNU6-1312P-201ENST00000362425 108 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 SNORA63.6-201ENST00000364921 119 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 RNA5SP484-201ENST00000458857 111 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 SCARNA17.3-201ENST00000516381 125 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 MIR6734-201ENST00000621166 68 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 AL162376.1-201ENST00000624117 175 ntBASIC1.53□□□□□ -2.16
CUEDC1Q9NWM3 Y_RNA.125-201ENST00000363371 111 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR19B1-201ENST00000384829 87 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR200A-201ENST00000384875 90 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 SNORD89-201ENST00000390981 114 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 snoU13.13-201ENST00000458842 104 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 MIR3678-201ENST00000578455 94 ntBASIC1.52□□□□□ -2.17
CUEDC1Q9NWM3 SNORD114-26-201ENST00000363543 72 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 Y_RNA.407-201ENST00000383986 113 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 MIR6828-201ENST00000636181 60 ntBASIC1.51□□□□□ -2.17
CUEDC1Q9NWM3 SNORA33.1-201ENST00000364957 130 ntBASIC1.5□□□□□ -2.17
CUEDC1Q9NWM3 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
CUEDC1Q9NWM3 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
CUEDC1Q9NWM3 RNU4-88P-201ENST00000411220 86 ntBASIC1.49□□□□□ -2.17
CUEDC1Q9NWM3 RNA5SP102-201ENST00000516865 106 ntBASIC1.49□□□□□ -2.17
CUEDC1Q9NWM3 SNORD114-24-201ENST00000365029 72 ntBASIC1.48□□□□□ -2.17
CUEDC1Q9NWM3 MIR3612-201ENST00000579753 87 ntBASIC1.48□□□□□ -2.17
CUEDC1Q9NWM3 Y_RNA.246-201ENST00000364495 108 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 MIR652-201ENST00000385278 98 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 SNORD124-201ENST00000459577 104 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 AC025627.3-201ENST00000582078 182 ntBASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.47□□□□□ -2.17
CUEDC1Q9NWM3 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
CUEDC1Q9NWM3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CUEDC1Q9NWM3 MIR548AD-201ENST00000584780 82 ntBASIC1.44□□□□□ -2.18
CUEDC1Q9NWM3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.44□□□□□ -2.18
CUEDC1Q9NWM3 RNU6-753P-201ENST00000363926 107 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 RNU4-45P-201ENST00000365469 141 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 MIR548E-201ENST00000408287 88 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 AL021921.1-201ENST00000442774 93 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 RNA5SP227-201ENST00000516184 113 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
CUEDC1Q9NWM3 SNORD114-22-201ENST00000365423 72 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 SNORA41B-201ENST00000384785 128 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 AC006210.1-201ENST00000424882 111 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 RNU6-231P-201ENST00000517122 103 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
CUEDC1Q9NWM3 Y_RNA.325-201ENST00000365171 122 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 MIR582-201ENST00000365731 98 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 SNORD110-201ENST00000408189 75 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 RNU6-980P-201ENST00000516925 103 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
CUEDC1Q9NWM3 AC022709.1-201ENST00000615967 87 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms