Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 Y_RNA.94-201ENST00000363068 106 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 SNORD115-37-201ENST00000363768 82 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 RNU6-1124P-201ENST00000384169 107 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 RNU6-242P-201ENST00000384359 107 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 MIR1255A-201ENST00000408338 113 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 SNORA72.7-201ENST00000516349 94 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 RNA5SP285-201ENST00000516619 119 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 RNU5B-6P-201ENST00000516765 68 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 MIR6755-201ENST00000619993 66 ntBASIC0.5□□□□□ -2.33
CDT1Q9H211 RNU6-824P-201ENST00000363724 104 ntBASIC0.49□□□□□ -2.33
CDT1Q9H211 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
CDT1Q9H211 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
CDT1Q9H211 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
CDT1Q9H211 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.49□□□□□ -2.33
CDT1Q9H211 MIR548O2-201ENST00000616090 70 ntBASIC0.49□□□□□ -2.33
CDT1Q9H211 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
CDT1Q9H211 SNORD44.1-201ENST00000363202 61 ntBASIC0.48□□□□□ -2.33
CDT1Q9H211 RNU6-54P-201ENST00000365563 107 ntBASIC0.48□□□□□ -2.33
CDT1Q9H211 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
CDT1Q9H211 SNORD42B-201ENST00000458893 67 ntBASIC0.48□□□□□ -2.33
CDT1Q9H211 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
CDT1Q9H211 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 Y_RNA.423-201ENST00000384057 113 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 RNU6V-201ENST00000384105 107 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 Y_RNA.532-201ENST00000384590 113 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 MT-TY-201ENST00000387409 66 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 SNORD78.1-201ENST00000390866 65 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 RNA5SP225-201ENST00000410874 135 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 RNU6-1057P-201ENST00000517162 102 ntBASIC0.47□□□□□ -2.33
CDT1Q9H211 Y_RNA.219-201ENST00000364232 113 ntBASIC0.46□□□□□ -2.34
CDT1Q9H211 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.46□□□□□ -2.34
CDT1Q9H211 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CDT1Q9H211 RNU6-129P-201ENST00000391022 107 ntBASIC0.46□□□□□ -2.34
CDT1Q9H211 U3.27-201ENST00000391237 200 ntBASIC0.46□□□□□ -2.34
CDT1Q9H211 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.46□□□□□ -2.34
CDT1Q9H211 MIR4460-201ENST00000577862 86 ntBASIC0.46□□□□□ -2.34
CDT1Q9H211 MIR548AE1-201ENST00000583292 70 ntBASIC0.46□□□□□ -2.34
CDT1Q9H211 RNU6-208P-201ENST00000362431 107 ntBASIC0.45□□□□□ -2.34
CDT1Q9H211 HMGN2P22-201ENST00000427588 175 ntBASIC0.45□□□□□ -2.34
CDT1Q9H211 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.45□□□□□ -2.34
CDT1Q9H211 YWHAEP2-201ENST00000580066 112 ntBASIC0.45□□□□□ -2.34
CDT1Q9H211 MIRLET7A1-201ENST00000362295 80 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 RNU6-382P-201ENST00000365181 106 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 Y_RNA.371-201ENST00000365591 113 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 SNORD77.2-201ENST00000391045 68 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 RNU6-1177P-201ENST00000391058 104 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 SNORD110-201ENST00000408189 75 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 RNU2-59P-201ENST00000410482 191 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 RNU7-74P-201ENST00000459104 62 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 RNU6-557P-201ENST00000516842 110 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 AC023932.2-201ENST00000603176 175 ntBASIC0.44□□□□□ -2.34
CDT1Q9H211 RNU6-330P-201ENST00000363015 107 ntBASIC0.43□□□□□ -2.34
CDT1Q9H211 RNU6-863P-201ENST00000515989 104 ntBASIC0.43□□□□□ -2.34
CDT1Q9H211 MIR4712-201ENST00000583750 82 ntBASIC0.43□□□□□ -2.34
CDT1Q9H211 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 Y_RNA.12-201ENST00000362393 112 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 RNU6-495P-201ENST00000362995 107 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 RNU6-686P-201ENST00000364839 107 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 RNU6-1275P-201ENST00000391087 107 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 AC097510.1-201ENST00000510945 133 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 MIR4514-201ENST00000581410 57 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 MIR2909-201ENST00000617113 69 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 AC069503.3-201ENST00000618674 145 ntBASIC0.42□□□□□ -2.34
CDT1Q9H211 RNU6-340P-201ENST00000364005 107 ntBASIC0.41□□□□□ -2.34
CDT1Q9H211 RNY4P3-201ENST00000365254 95 ntBASIC0.41□□□□□ -2.34
CDT1Q9H211 AC006210.1-201ENST00000424882 111 ntBASIC0.41□□□□□ -2.34
CDT1Q9H211 MIR4473-201ENST00000583731 91 ntBASIC0.41□□□□□ -2.34
CDT1Q9H211 Y_RNA.788-201ENST00000622394 112 ntBASIC0.41□□□□□ -2.34
CDT1Q9H211 MIR4773-1-201ENST00000637203 78 ntBASIC0.41□□□□□ -2.34
CDT1Q9H211 MIR1265-201ENST00000408444 86 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 Y_RNA.606-201ENST00000410579 103 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 YWHAEP3-201ENST00000582767 121 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 MIR4484-201ENST00000582855 83 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 U6.81-201ENST00000612550 106 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 MIR3202-2-201ENST00000635980 79 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 MIR499B-201ENST00000636498 73 ntBASIC0.4□□□□□ -2.35
CDT1Q9H211 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CDT1Q9H211 RNU5F-1-201ENST00000362507 117 ntBASIC0.39□□□□□ -2.35
CDT1Q9H211 SNORA2A-201ENST00000383885 135 ntBASIC0.39□□□□□ -2.35
CDT1Q9H211 RNU6-815P-201ENST00000384080 113 ntBASIC0.39□□□□□ -2.35
CDT1Q9H211 MIR652-201ENST00000385278 98 ntBASIC0.39□□□□□ -2.35
CDT1Q9H211 SCARNA18B-201ENST00000458806 135 ntBASIC0.39□□□□□ -2.35
CDT1Q9H211 SNORA40.17-201ENST00000517256 115 ntBASIC0.39□□□□□ -2.35
CDT1Q9H211 AC073869.9-201ENST00000641610 120 ntBASIC0.39□□□□□ -2.35
CDT1Q9H211 MIR329-2-201ENST00000385029 84 ntBASIC0.38□□□□□ -2.35
CDT1Q9H211 MIR501-201ENST00000390204 84 ntBASIC0.38□□□□□ -2.35
CDT1Q9H211 MIR664A-201ENST00000626086 82 ntBASIC0.38□□□□□ -2.35
CDT1Q9H211 RNU6-315P-201ENST00000362666 107 ntBASIC0.37□□□□□ -2.35
CDT1Q9H211 RNU6-990P-201ENST00000364385 104 ntBASIC0.37□□□□□ -2.35
CDT1Q9H211 MIR203A-201ENST00000384836 110 ntBASIC0.37□□□□□ -2.35
CDT1Q9H211 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
CDT1Q9H211 AC074348.1-201ENST00000426503 132 ntBASIC0.37□□□□□ -2.35
CDT1Q9H211 RNU6-857P-201ENST00000515893 110 ntBASIC0.37□□□□□ -2.35
CDT1Q9H211 MIR5706-201ENST00000579841 80 ntBASIC0.37□□□□□ -2.35
CDT1Q9H211 Y_RNA.125-201ENST00000363371 111 ntBASIC0.36□□□□□ -2.35
CDT1Q9H211 Y_RNA.264-201ENST00000364665 102 ntBASIC0.36□□□□□ -2.35
CDT1Q9H211 RNU6-154P-201ENST00000384306 106 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms