Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
KRTAP3-3Q9BYR6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP325-201ENST00000363756 130 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP517-201ENST00000364724 117 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 Y_RNA.335-201ENST00000365299 96 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 Y_RNA.423-201ENST00000384057 113 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 SNORA54-201ENST00000384281 123 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR1193-201ENST00000408109 78 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 SNORD88.1-201ENST00000408684 91 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP489-201ENST00000410986 109 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 RN7SL542P-201ENST00000467147 294 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP255-201ENST00000516370 107 ntBASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
KRTAP3-3Q9BYR6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP3-3Q9BYR6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
KRTAP3-3Q9BYR6 RNU4-47P-201ENST00000410876 114 ntBASIC1.44□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR5683-201ENST00000636514 76 ntBASIC1.44□□□□□ -2.18
KRTAP3-3Q9BYR6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.44□□□□□ -2.18
KRTAP3-3Q9BYR6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP3-3Q9BYR6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP3-3Q9BYR6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR22-201ENST00000362190 85 ntBASIC1.43□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP222-201ENST00000411039 105 ntBASIC1.43□□□□□ -2.18
KRTAP3-3Q9BYR6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP3-3Q9BYR6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR124-2-201ENST00000385081 109 ntBASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP247-201ENST00000411181 105 ntBASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 AP002795.1-201ENST00000534879 84 ntBASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR3925-201ENST00000584674 77 ntBASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 SNORA25.18-201ENST00000607153 114 ntBASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
KRTAP3-3Q9BYR6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR379-201ENST00000362218 67 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 RNA5SP393-201ENST00000363423 117 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 SNORD114-24-201ENST00000365029 72 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 AC005326.1-201ENST00000429197 123 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 RN7SL499P-201ENST00000481141 276 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR5680-201ENST00000577577 84 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR4697-201ENST00000582977 78 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 MIR7112-201ENST00000616126 65 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 U6.105-201ENST00000637379 88 ntBASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.41□□□□□ -2.18
KRTAP3-3Q9BYR6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 SNORD118-201ENST00000363593 134 ntBASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 SNORA62.3-201ENST00000365110 153 ntBASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 RNU6-900P-201ENST00000384498 102 ntBASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR554-201ENST00000384874 96 ntBASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR512-1-201ENST00000384913 84 ntBASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR3651-201ENST00000630427 90 ntBASIC1.4□□□□□ -2.19
KRTAP3-3Q9BYR6 Y_RNA.223-201ENST00000364290 113 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR676-201ENST00000390702 67 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR1197-201ENST00000408818 88 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 RNA5SP425-201ENST00000410336 112 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 AL356379.1-201ENST00000414105 126 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR5004-201ENST00000579078 107 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR7975-201ENST00000619350 68 ntBASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP3-3Q9BYR6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 SNORA9.2-201ENST00000365361 133 ntBASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 SNORD45C-201ENST00000383893 79 ntBASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR760-201ENST00000390220 80 ntBASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 RNA5SP120-201ENST00000410900 112 ntBASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 SCARNA13-201ENST00000516672 275 ntBASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 AL096840.1-201ENST00000603287 93 ntBASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR6854-201ENST00000614935 69 ntBASIC1.38□□□□□ -2.19
KRTAP3-3Q9BYR6 SNORA71.1-201ENST00000364523 117 ntBASIC1.37□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR581-201ENST00000384895 96 ntBASIC1.37□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR134-201ENST00000385258 73 ntBASIC1.37□□□□□ -2.19
KRTAP3-3Q9BYR6 AL353691.2-201ENST00000443795 59 ntBASIC1.37□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR5704-201ENST00000584029 77 ntBASIC1.37□□□□□ -2.19
KRTAP3-3Q9BYR6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR26A1-201ENST00000362205 77 ntBASIC1.36□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR200C-201ENST00000384980 68 ntBASIC1.36□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR887-201ENST00000401258 79 ntBASIC1.36□□□□□ -2.19
KRTAP3-3Q9BYR6 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.36□□□□□ -2.19
KRTAP3-3Q9BYR6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP3-3Q9BYR6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP3-3Q9BYR6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR449B-201ENST00000384995 97 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 SNORA40.8-201ENST00000411034 126 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 RPL35AP4-201ENST00000412007 102 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 AC087343.1-201ENST00000477341 475 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 SCARNA11.2-201ENST00000517183 154 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR4446-201ENST00000578505 67 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR3158-1-201ENST00000583596 81 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 MIR8068-201ENST00000618032 68 ntBASIC1.35□□□□□ -2.19
KRTAP3-3Q9BYR6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP3-3Q9BYR6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP3-3Q9BYR6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP3-3Q9BYR6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms