Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 Y_RNA.51-201ENST00000362725 102 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 RNU6-458P-201ENST00000384179 107 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 RNU6-1119P-201ENST00000384349 108 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 MT-TI-201ENST00000387365 69 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 MIR759-201ENST00000390224 91 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 MTATP6P29-201ENST00000415057 132 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 Y_RNA.651-201ENST00000459380 103 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 AC080013.6-201ENST00000606185 215 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 U6.58-201ENST00000613107 107 ntBASIC-3.53□□□□□ -2.98
SCAPERQ9BY12 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.54□□□□□ -2.98
SCAPERQ9BY12 AC006362.1-201ENST00000567392 174 ntBASIC-3.54□□□□□ -2.98
SCAPERQ9BY12 AC104985.2-201ENST00000620598 500 ntBASIC-3.54□□□□□ -2.98
SCAPERQ9BY12 Y_RNA.144-201ENST00000363521 113 ntBASIC-3.55□□□□□ -2.98
SCAPERQ9BY12 RNU6-818P-201ENST00000364837 108 ntBASIC-3.55□□□□□ -2.98
SCAPERQ9BY12 RNU6-651P-201ENST00000411040 105 ntBASIC-3.55□□□□□ -2.98
SCAPERQ9BY12 SNORD2.1-201ENST00000458762 69 ntBASIC-3.55□□□□□ -2.98
SCAPERQ9BY12 SNORD58B-201ENST00000607313 66 ntBASIC-3.55□□□□□ -2.98
SCAPERQ9BY12 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.56□□□□□ -2.98
SCAPERQ9BY12 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.57□□□□□ -2.98
SCAPERQ9BY12 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.58□□□□□ -2.98
SCAPERQ9BY12 RNY4P14-201ENST00000363656 96 ntBASIC-3.58□□□□□ -2.98
SCAPERQ9BY12 RNU6-409P-201ENST00000384114 104 ntBASIC-3.58□□□□□ -2.98
SCAPERQ9BY12 MTND1P29-201ENST00000448112 647 ntBASIC-3.58□□□□□ -2.98
SCAPERQ9BY12 SNORD18B-201ENST00000365659 72 ntBASIC-3.59□□□□□ -2.98
SCAPERQ9BY12 Y_RNA.485-201ENST00000384395 102 ntBASIC-3.59□□□□□ -2.98
SCAPERQ9BY12 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.6□□□□□ -2.99
SCAPERQ9BY12 MTND3P2-201ENST00000438452 342 ntBASIC-3.6□□□□□ -2.99
SCAPERQ9BY12 RNU6-807P-201ENST00000516805 107 ntBASIC-3.6□□□□□ -2.99
SCAPERQ9BY12 AC090574.1-201ENST00000623186 233 ntBASIC-3.6□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.6□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.154-201ENST00000363624 102 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 RNY4P25-201ENST00000459254 96 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 AC005520.4-201ENST00000604337 90 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 RNU6-832P-201ENST00000363319 107 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 AL513043.2-201ENST00000573941 143 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 AC090582.1-201ENST00000636321 199 ntBASIC-3.61□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.62□□□□□ -2.99
SCAPERQ9BY12 SNORD90-201ENST00000391145 111 ntBASIC-3.62□□□□□ -2.99
SCAPERQ9BY12 MIR548Z-201ENST00000584743 97 ntBASIC-3.62□□□□□ -2.99
SCAPERQ9BY12 RNU6-508P-201ENST00000363231 103 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 RNU6-309P-201ENST00000364573 106 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 SNORD116-1-201ENST00000384335 95 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.573-201ENST00000384763 105 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 MT-TW-201ENST00000387382 68 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 MTND4P17-201ENST00000470444 350 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 RNU6-314P-201ENST00000516574 104 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 U2.7-201ENST00000619197 100 ntBASIC-3.63□□□□□ -2.99
SCAPERQ9BY12 MIR429-201ENST00000362106 83 ntBASIC-3.64□□□□□ -2.99
SCAPERQ9BY12 RNU6-1009P-201ENST00000390996 107 ntBASIC-3.64□□□□□ -2.99
SCAPERQ9BY12 MIR513C-201ENST00000401352 84 ntBASIC-3.64□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.64□□□□□ -2.99
SCAPERQ9BY12 MIR3170-201ENST00000582699 77 ntBASIC-3.64□□□□□ -2.99
SCAPERQ9BY12 SNORD18C-201ENST00000362704 69 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 RNU6-238P-201ENST00000363313 106 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 RNU6-151P-201ENST00000364158 107 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 SNORA63.7-201ENST00000365579 123 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 AL118496.2-201ENST00000448300 230 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.65□□□□□ -2.99
SCAPERQ9BY12 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.66□□□□□ -3
SCAPERQ9BY12 MIR548A3-201ENST00000385297 97 ntBASIC-3.66□□□□□ -3
SCAPERQ9BY12 MIR548I1-201ENST00000408810 149 ntBASIC-3.66□□□□□ -3
SCAPERQ9BY12 RNU6-121P-201ENST00000410525 99 ntBASIC-3.66□□□□□ -3
SCAPERQ9BY12 SNORD4B-201ENST00000459083 72 ntBASIC-3.66□□□□□ -3
SCAPERQ9BY12 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.66□□□□□ -3
SCAPERQ9BY12 RNU7-30P-201ENST00000516835 62 ntBASIC-3.66□□□□□ -3
SCAPERQ9BY12 Y_RNA.9-201ENST00000362354 101 ntBASIC-3.67□□□□□ -3
SCAPERQ9BY12 RNU5F-1-201ENST00000362507 117 ntBASIC-3.67□□□□□ -3
SCAPERQ9BY12 SNORD113-3-201ENST00000364830 72 ntBASIC-3.67□□□□□ -3
SCAPERQ9BY12 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.67□□□□□ -3
SCAPERQ9BY12 SNORA18.5-201ENST00000516616 101 ntBASIC-3.67□□□□□ -3
SCAPERQ9BY12 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.68□□□□□ -3
SCAPERQ9BY12 SNORD116-2-201ENST00000384274 95 ntBASIC-3.68□□□□□ -3
SCAPERQ9BY12 RNA5SP292-201ENST00000390974 118 ntBASIC-3.68□□□□□ -3
SCAPERQ9BY12 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.68□□□□□ -3
SCAPERQ9BY12 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.69□□□□□ -3
SCAPERQ9BY12 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.69□□□□□ -3
SCAPERQ9BY12 RNU6-598P-201ENST00000364017 105 ntBASIC-3.69□□□□□ -3
SCAPERQ9BY12 RNU6-768P-201ENST00000384683 107 ntBASIC-3.69□□□□□ -3
SCAPERQ9BY12 MIR3611-201ENST00000584484 83 ntBASIC-3.69□□□□□ -3
SCAPERQ9BY12 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 Y_RNA.198-201ENST00000364013 98 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 MIR548D2-201ENST00000384955 97 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 U6.81-201ENST00000612550 106 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 RNU6-247P-201ENST00000362636 107 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 Y_RNA.44-201ENST00000362676 108 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 MIR509-1-201ENST00000385265 94 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 MIR509-2-201ENST00000390724 91 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.7□□□□□ -3
SCAPERQ9BY12 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.71□□□□□ -3
SCAPERQ9BY12 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.71□□□□□ -3
SCAPERQ9BY12 MIR548C-201ENST00000384815 97 ntBASIC-3.71□□□□□ -3
Retrieved 100 of 98,524 protein–RNA pairs in 452 ms