Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.55□□□□□ -2.5
HDHD3Q9BSH5 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.56□□□□□ -2.5
HDHD3Q9BSH5 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.56□□□□□ -2.5
HDHD3Q9BSH5 RNU6-959P-201ENST00000384671 107 ntBASIC-0.56□□□□□ -2.5
HDHD3Q9BSH5 SCARNA23-201ENST00000516060 130 ntBASIC-0.56□□□□□ -2.5
HDHD3Q9BSH5 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
HDHD3Q9BSH5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
HDHD3Q9BSH5 MIR101-1-201ENST00000362265 75 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 RNU6-81P-201ENST00000365608 104 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 MT-TR-201ENST00000387439 65 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 AC114755.3-201ENST00000481111 251 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 RNU6-412P-201ENST00000516434 106 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 MIR6851-201ENST00000617060 67 ntBASIC-0.57□□□□□ -2.5
HDHD3Q9BSH5 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.58□□□□□ -2.5
HDHD3Q9BSH5 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.58□□□□□ -2.5
HDHD3Q9BSH5 RNU6-519P-201ENST00000410590 108 ntBASIC-0.58□□□□□ -2.5
HDHD3Q9BSH5 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.58□□□□□ -2.5
HDHD3Q9BSH5 MIR4493-201ENST00000584016 73 ntBASIC-0.58□□□□□ -2.5
HDHD3Q9BSH5 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
HDHD3Q9BSH5 AL391099.1-201ENST00000624635 187 ntBASIC-0.58□□□□□ -2.5
HDHD3Q9BSH5 RNU6-973P-201ENST00000364690 107 ntBASIC-0.59□□□□□ -2.5
HDHD3Q9BSH5 RNU6-972P-201ENST00000391208 107 ntBASIC-0.59□□□□□ -2.5
HDHD3Q9BSH5 RNU6-337P-201ENST00000391243 106 ntBASIC-0.59□□□□□ -2.5
HDHD3Q9BSH5 SNORD75.2-201ENST00000408784 58 ntBASIC-0.59□□□□□ -2.5
HDHD3Q9BSH5 SNORA18.5-201ENST00000516616 101 ntBASIC-0.59□□□□□ -2.5
HDHD3Q9BSH5 MIR3668-201ENST00000582138 75 ntBASIC-0.59□□□□□ -2.5
HDHD3Q9BSH5 MIR4636-201ENST00000582271 80 ntBASIC-0.59□□□□□ -2.5
HDHD3Q9BSH5 SNORD114-14-201ENST00000362723 75 ntBASIC-0.6□□□□□ -2.51
HDHD3Q9BSH5 RNU6-887P-201ENST00000410660 100 ntBASIC-0.6□□□□□ -2.51
HDHD3Q9BSH5 RNU6-990P-201ENST00000364385 104 ntBASIC-0.61□□□□□ -2.51
HDHD3Q9BSH5 MIR604-201ENST00000384880 94 ntBASIC-0.61□□□□□ -2.51
HDHD3Q9BSH5 MIR590-201ENST00000385008 97 ntBASIC-0.61□□□□□ -2.51
HDHD3Q9BSH5 SNORD75.1-201ENST00000408373 60 ntBASIC-0.61□□□□□ -2.51
HDHD3Q9BSH5 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.61□□□□□ -2.51
HDHD3Q9BSH5 MIR6773-201ENST00000612812 74 ntBASIC-0.61□□□□□ -2.51
HDHD3Q9BSH5 SNORD115-23-201ENST00000364461 82 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 SNORA63.6-201ENST00000364921 119 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 RNU6-106P-201ENST00000384405 107 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 RNU6-592P-201ENST00000411333 103 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 AL445193.1-201ENST00000441183 141 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 RPS29P8-201ENST00000445109 171 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 SNORD38.3-201ENST00000516599 73 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 AC026421.1-201ENST00000519101 163 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 MIR4436A-201ENST00000585278 85 ntBASIC-0.62□□□□□ -2.51
HDHD3Q9BSH5 MIR224-201ENST00000384889 81 ntBASIC-0.63□□□□□ -2.51
HDHD3Q9BSH5 MIRLET7B-201ENST00000385140 83 ntBASIC-0.63□□□□□ -2.51
HDHD3Q9BSH5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
HDHD3Q9BSH5 AL365222.1-201ENST00000614661 98 ntBASIC-0.63□□□□□ -2.51
HDHD3Q9BSH5 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.64□□□□□ -2.51
HDHD3Q9BSH5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.64□□□□□ -2.51
HDHD3Q9BSH5 RNU6-554P-201ENST00000410466 106 ntBASIC-0.64□□□□□ -2.51
HDHD3Q9BSH5 snoU13.17-201ENST00000458802 104 ntBASIC-0.64□□□□□ -2.51
HDHD3Q9BSH5 RNU6-758P-201ENST00000516292 89 ntBASIC-0.64□□□□□ -2.51
HDHD3Q9BSH5 MIR5704-201ENST00000584029 77 ntBASIC-0.64□□□□□ -2.51
HDHD3Q9BSH5 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.64□□□□□ -2.51
HDHD3Q9BSH5 RNU6-824P-201ENST00000363724 104 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 SNORD116-10-201ENST00000363791 102 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 RNA5SP368-201ENST00000364298 116 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 RNU6-382P-201ENST00000365181 106 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 RNY4P3-201ENST00000365254 95 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 AC008267.6-201ENST00000441664 139 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 RNU6-589P-201ENST00000516485 107 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 MIR8068-201ENST00000618032 68 ntBASIC-0.65□□□□□ -2.51
HDHD3Q9BSH5 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.66□□□□□ -2.52
HDHD3Q9BSH5 RNU7-61P-201ENST00000515897 61 ntBASIC-0.66□□□□□ -2.52
HDHD3Q9BSH5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.66□□□□□ -2.52
HDHD3Q9BSH5 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 RNU4-32P-201ENST00000363404 141 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 MIR1302-5-201ENST00000408164 150 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 MIR1265-201ENST00000408444 86 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 MTATP6P29-201ENST00000415057 132 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 RNU6-109P-201ENST00000516364 107 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 RNU6-184P-201ENST00000516514 107 ntBASIC-0.67□□□□□ -2.52
HDHD3Q9BSH5 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 SNORA19-201ENST00000384737 128 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 Z95118.1-201ENST00000421372 247 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 MIR6854-201ENST00000614935 69 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 MIR6129-201ENST00000616087 109 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 AC090617.8-201ENST00000623339 167 ntBASIC-0.68□□□□□ -2.52
HDHD3Q9BSH5 RNU6-834P-201ENST00000362367 110 ntBASIC-0.69□□□□□ -2.52
HDHD3Q9BSH5 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.69□□□□□ -2.52
HDHD3Q9BSH5 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.69□□□□□ -2.52
HDHD3Q9BSH5 RNU6-721P-201ENST00000410155 105 ntBASIC-0.69□□□□□ -2.52
HDHD3Q9BSH5 AC108676.2-201ENST00000605225 163 ntBASIC-0.69□□□□□ -2.52
HDHD3Q9BSH5 U6.81-201ENST00000612550 106 ntBASIC-0.69□□□□□ -2.52
HDHD3Q9BSH5 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.7□□□□□ -2.52
HDHD3Q9BSH5 RNU6-260P-201ENST00000384092 107 ntBASIC-0.7□□□□□ -2.52
HDHD3Q9BSH5 MIR518B-201ENST00000385127 83 ntBASIC-0.7□□□□□ -2.52
HDHD3Q9BSH5 MIR204-201ENST00000385200 110 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 1328.4 ms