Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR4439-201ENST00000583746 80 ntBASIC-1.73□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.74□□□□□ -2.69
CLHC1Q8NHS4 AC104996.3-201ENST00000590718 94 ntBASIC-1.74□□□□□ -2.69
CLHC1Q8NHS4 AC141273.2-201ENST00000618989 130 ntBASIC-1.74□□□□□ -2.69
CLHC1Q8NHS4 MIR29B1-201ENST00000385015 81 ntBASIC-1.75□□□□□ -2.69
CLHC1Q8NHS4 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.75□□□□□ -2.69
CLHC1Q8NHS4 RNU6-781P-201ENST00000516377 101 ntBASIC-1.75□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 RNU6-62P-201ENST00000516526 102 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 MIR1246-201ENST00000636535 73 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 AC132825.6-201ENST00000638861 357 ntBASIC-1.76□□□□□ -2.69
CLHC1Q8NHS4 RNU6-832P-201ENST00000363319 107 ntBASIC-1.77□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.77□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.77□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.77□□□□□ -2.69
CLHC1Q8NHS4 RNU6-644P-201ENST00000391155 98 ntBASIC-1.77□□□□□ -2.69
CLHC1Q8NHS4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.77□□□□□ -2.69
CLHC1Q8NHS4 SNORA20.1-201ENST00000364790 130 ntBASIC-1.78□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.78□□□□□ -2.69
CLHC1Q8NHS4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.78□□□□□ -2.69
CLHC1Q8NHS4 RNU6-479P-201ENST00000516348 105 ntBASIC-1.78□□□□□ -2.69
CLHC1Q8NHS4 AC062037.2-201ENST00000610137 73 ntBASIC-1.78□□□□□ -2.69
CLHC1Q8NHS4 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.78□□□□□ -2.69
CLHC1Q8NHS4 RNU6-924P-201ENST00000362926 108 ntBASIC-1.79□□□□□ -2.7
CLHC1Q8NHS4 RNY4P27-201ENST00000363341 96 ntBASIC-1.79□□□□□ -2.7
CLHC1Q8NHS4 RNU6-260P-201ENST00000384092 107 ntBASIC-1.79□□□□□ -2.7
CLHC1Q8NHS4 SNORD4B-201ENST00000459083 72 ntBASIC-1.79□□□□□ -2.7
CLHC1Q8NHS4 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.79□□□□□ -2.7
CLHC1Q8NHS4 AC006254.2-201ENST00000603259 279 ntBASIC-1.79□□□□□ -2.7
CLHC1Q8NHS4 RNY3P2-201ENST00000362918 102 ntBASIC-1.8□□□□□ -2.7
CLHC1Q8NHS4 SNORD115-33-201ENST00000363723 82 ntBASIC-1.8□□□□□ -2.7
CLHC1Q8NHS4 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.8□□□□□ -2.7
CLHC1Q8NHS4 snoU13.17-201ENST00000458802 104 ntBASIC-1.8□□□□□ -2.7
CLHC1Q8NHS4 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.8□□□□□ -2.7
CLHC1Q8NHS4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.8□□□□□ -2.7
CLHC1Q8NHS4 RNU6-151P-201ENST00000364158 107 ntBASIC-1.81□□□□□ -2.7
CLHC1Q8NHS4 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.81□□□□□ -2.7
CLHC1Q8NHS4 SNORA26.4-201ENST00000391188 123 ntBASIC-1.81□□□□□ -2.7
CLHC1Q8NHS4 MIR513C-201ENST00000401352 84 ntBASIC-1.81□□□□□ -2.7
CLHC1Q8NHS4 AC025166.1-201ENST00000612411 163 ntBASIC-1.81□□□□□ -2.7
CLHC1Q8NHS4 MTCYBP9-201ENST00000431021 303 ntBASIC-1.82□□□□□ -2.7
CLHC1Q8NHS4 MIR4679-2-201ENST00000578358 77 ntBASIC-1.82□□□□□ -2.7
CLHC1Q8NHS4 AC008737.2-201ENST00000599446 118 ntBASIC-1.82□□□□□ -2.7
CLHC1Q8NHS4 U7.2-201ENST00000607576 63 ntBASIC-1.82□□□□□ -2.7
CLHC1Q8NHS4 RNU6-382P-201ENST00000365181 106 ntBASIC-1.83□□□□□ -2.7
CLHC1Q8NHS4 MIR1255B2-201ENST00000408618 67 ntBASIC-1.83□□□□□ -2.7
CLHC1Q8NHS4 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.83□□□□□ -2.7
CLHC1Q8NHS4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.83□□□□□ -2.7
CLHC1Q8NHS4 SNORA2.1-201ENST00000363089 137 ntBASIC-1.84□□□□□ -2.7
CLHC1Q8NHS4 SNORA33.1-201ENST00000364957 130 ntBASIC-1.84□□□□□ -2.7
CLHC1Q8NHS4 SNORD58C-201ENST00000365223 64 ntBASIC-1.84□□□□□ -2.7
CLHC1Q8NHS4 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.84□□□□□ -2.7
CLHC1Q8NHS4 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 RNU6-813P-201ENST00000384691 107 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 MIR606-201ENST00000384851 96 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 HLA-S-202ENST00000425174 53 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 MIR3613-201ENST00000579844 87 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 MIR548Z-201ENST00000584743 97 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 MIR6818-201ENST00000621576 65 ntBASIC-1.85□□□□□ -2.71
CLHC1Q8NHS4 SNORD45B-201ENST00000364617 72 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 RNU6-746P-201ENST00000384112 109 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 MIR1302-3-201ENST00000408128 138 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 MTATP6P29-201ENST00000415057 132 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 SNORD63.1-201ENST00000516178 80 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 CYP3A54P-201ENST00000566950 75 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 AC138207.3-201ENST00000585289 166 ntBASIC-1.86□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.87□□□□□ -2.71
CLHC1Q8NHS4 MIR568-201ENST00000385036 95 ntBASIC-1.87□□□□□ -2.71
CLHC1Q8NHS4 RNA5SP292-201ENST00000390974 118 ntBASIC-1.87□□□□□ -2.71
CLHC1Q8NHS4 SNORD90-201ENST00000391145 111 ntBASIC-1.87□□□□□ -2.71
CLHC1Q8NHS4 RNU7-134P-201ENST00000458997 64 ntBASIC-1.87□□□□□ -2.71
CLHC1Q8NHS4 AC026421.1-201ENST00000519101 163 ntBASIC-1.87□□□□□ -2.71
CLHC1Q8NHS4 AC103810.7-201ENST00000607821 91 ntBASIC-1.87□□□□□ -2.71
CLHC1Q8NHS4 RNU7-120P-201ENST00000459334 63 ntBASIC-1.88□□□□□ -2.71
CLHC1Q8NHS4 MIR548X2-201ENST00000579776 100 ntBASIC-1.88□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 RNU6-738P-201ENST00000384531 106 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 RNU6-519P-201ENST00000410590 108 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 SNORA18.5-201ENST00000516616 101 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 RNU6-861P-201ENST00000516745 106 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 MIR3657-201ENST00000584818 117 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 MIR6509-201ENST00000614603 85 ntBASIC-1.89□□□□□ -2.71
CLHC1Q8NHS4 RNU6-824P-201ENST00000363724 104 ntBASIC-1.9□□□□□ -2.71
CLHC1Q8NHS4 RNU6-682P-201ENST00000363843 106 ntBASIC-1.9□□□□□ -2.71
CLHC1Q8NHS4 RNU6-867P-201ENST00000364956 107 ntBASIC-1.9□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.9□□□□□ -2.71
CLHC1Q8NHS4 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.9□□□□□ -2.71
CLHC1Q8NHS4 AL035470.1-201ENST00000622571 220 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms