Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 RNU6-753P-201ENST00000363926 107 ntBASIC1.95□□□□□ -2.1
EFCAB3Q8N7B9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.95□□□□□ -2.1
EFCAB3Q8N7B9 MIR4285-201ENST00000581001 85 ntBASIC1.95□□□□□ -2.1
EFCAB3Q8N7B9 MIR7111-201ENST00000619751 72 ntBASIC1.95□□□□□ -2.1
EFCAB3Q8N7B9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
EFCAB3Q8N7B9 Y_RNA.325-201ENST00000365171 122 ntBASIC1.94□□□□□ -2.1
EFCAB3Q8N7B9 SNORD110-201ENST00000408189 75 ntBASIC1.94□□□□□ -2.1
EFCAB3Q8N7B9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
EFCAB3Q8N7B9 MIR582-201ENST00000365731 98 ntBASIC1.93□□□□□ -2.1
EFCAB3Q8N7B9 CYP3A54P-201ENST00000566950 75 ntBASIC1.93□□□□□ -2.1
EFCAB3Q8N7B9 MIR548AE1-201ENST00000583292 70 ntBASIC1.93□□□□□ -2.1
EFCAB3Q8N7B9 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
EFCAB3Q8N7B9 AL021921.1-201ENST00000442774 93 ntBASIC1.92□□□□□ -2.1
EFCAB3Q8N7B9 RNU6-231P-201ENST00000517122 103 ntBASIC1.92□□□□□ -2.1
EFCAB3Q8N7B9 MIR4473-201ENST00000583731 91 ntBASIC1.92□□□□□ -2.1
EFCAB3Q8N7B9 U6.96-201ENST00000636425 70 ntBASIC1.92□□□□□ -2.1
EFCAB3Q8N7B9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
EFCAB3Q8N7B9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.9□□□□□ -2.11
EFCAB3Q8N7B9 RNU4-45P-201ENST00000365469 141 ntBASIC1.9□□□□□ -2.11
EFCAB3Q8N7B9 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
EFCAB3Q8N7B9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
EFCAB3Q8N7B9 MIR378A-201ENST00000362177 66 ntBASIC1.89□□□□□ -2.11
EFCAB3Q8N7B9 SNORA9.1-201ENST00000362412 131 ntBASIC1.89□□□□□ -2.11
EFCAB3Q8N7B9 AC108667.1-201ENST00000428618 249 ntBASIC1.89□□□□□ -2.11
EFCAB3Q8N7B9 RNA5SP268-201ENST00000516828 124 ntBASIC1.89□□□□□ -2.11
EFCAB3Q8N7B9 snoU13.31-201ENST00000607291 104 ntBASIC1.89□□□□□ -2.11
EFCAB3Q8N7B9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
EFCAB3Q8N7B9 Y_RNA.74-201ENST00000362911 99 ntBASIC1.88□□□□□ -2.11
EFCAB3Q8N7B9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
EFCAB3Q8N7B9 SNORD124-201ENST00000459577 104 ntBASIC1.88□□□□□ -2.11
EFCAB3Q8N7B9 RNU6-980P-201ENST00000516925 103 ntBASIC1.88□□□□□ -2.11
EFCAB3Q8N7B9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
EFCAB3Q8N7B9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.87□□□□□ -2.11
EFCAB3Q8N7B9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
EFCAB3Q8N7B9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
EFCAB3Q8N7B9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
EFCAB3Q8N7B9 MIR18A-201ENST00000362310 71 ntBASIC1.86□□□□□ -2.11
EFCAB3Q8N7B9 SNORA36.1-201ENST00000363424 132 ntBASIC1.86□□□□□ -2.11
EFCAB3Q8N7B9 SNORD116-16-201ENST00000384533 92 ntBASIC1.86□□□□□ -2.11
EFCAB3Q8N7B9 MIR516B1-201ENST00000385211 90 ntBASIC1.86□□□□□ -2.11
EFCAB3Q8N7B9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
EFCAB3Q8N7B9 RNU6-1246P-201ENST00000391064 107 ntBASIC1.84□□□□□ -2.11
EFCAB3Q8N7B9 SNORA25.15-201ENST00000516487 89 ntBASIC1.84□□□□□ -2.11
EFCAB3Q8N7B9 AC243829.6-201ENST00000612652 106 ntBASIC1.84□□□□□ -2.11
EFCAB3Q8N7B9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
EFCAB3Q8N7B9 SNORD114-24-201ENST00000365029 72 ntBASIC1.83□□□□□ -2.12
EFCAB3Q8N7B9 RNU6-518P-201ENST00000516056 96 ntBASIC1.83□□□□□ -2.12
EFCAB3Q8N7B9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
EFCAB3Q8N7B9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.82□□□□□ -2.12
EFCAB3Q8N7B9 SNORD116.2-201ENST00000391251 93 ntBASIC1.81□□□□□ -2.12
EFCAB3Q8N7B9 AC244090.1-201ENST00000441884 93 ntBASIC1.81□□□□□ -2.12
EFCAB3Q8N7B9 RNA5SP255-201ENST00000516370 107 ntBASIC1.81□□□□□ -2.12
EFCAB3Q8N7B9 AC011195.1-201ENST00000578177 177 ntBASIC1.81□□□□□ -2.12
EFCAB3Q8N7B9 MIR7107-201ENST00000611489 80 ntBASIC1.81□□□□□ -2.12
EFCAB3Q8N7B9 MIR7110-201ENST00000612638 86 ntBASIC1.81□□□□□ -2.12
EFCAB3Q8N7B9 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
EFCAB3Q8N7B9 MIR499A-201ENST00000384903 122 ntBASIC1.8□□□□□ -2.12
EFCAB3Q8N7B9 SNORD2-201ENST00000459163 69 ntBASIC1.8□□□□□ -2.12
EFCAB3Q8N7B9 RNA5SP94-201ENST00000516917 108 ntBASIC1.8□□□□□ -2.12
EFCAB3Q8N7B9 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
EFCAB3Q8N7B9 MIR20A-201ENST00000362279 71 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 RNU4-33P-201ENST00000364316 85 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 MIR527-201ENST00000385244 85 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 RNU6-321P-201ENST00000410912 106 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 AC243829.3-201ENST00000622177 108 ntBASIC1.79□□□□□ -2.12
EFCAB3Q8N7B9 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
EFCAB3Q8N7B9 MIR618-201ENST00000385287 98 ntBASIC1.78□□□□□ -2.12
EFCAB3Q8N7B9 SNORD99-201ENST00000408612 74 ntBASIC1.78□□□□□ -2.12
EFCAB3Q8N7B9 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.78□□□□□ -2.12
EFCAB3Q8N7B9 Y_RNA.282-201ENST00000364793 102 ntBASIC1.77□□□□□ -2.13
EFCAB3Q8N7B9 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
EFCAB3Q8N7B9 MIR5706-201ENST00000579841 80 ntBASIC1.77□□□□□ -2.13
EFCAB3Q8N7B9 SNORA70.25-201ENST00000612741 95 ntBASIC1.77□□□□□ -2.13
EFCAB3Q8N7B9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
EFCAB3Q8N7B9 MIR1255B2-201ENST00000408618 67 ntBASIC1.76□□□□□ -2.13
EFCAB3Q8N7B9 SNORD13-201ENST00000459299 104 ntBASIC1.76□□□□□ -2.13
EFCAB3Q8N7B9 SNORA40.16-201ENST00000517238 121 ntBASIC1.76□□□□□ -2.13
EFCAB3Q8N7B9 RNU1-124P-201ENST00000363861 145 ntBASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 SNORD26-201ENST00000384147 75 ntBASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 MIR519A2-201ENST00000384990 87 ntBASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 MIR8070-201ENST00000616510 88 ntBASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 AC090617.8-201ENST00000623339 167 ntBASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.75□□□□□ -2.13
EFCAB3Q8N7B9 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
EFCAB3Q8N7B9 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
EFCAB3Q8N7B9 RNU6-35P-201ENST00000384530 107 ntBASIC1.73□□□□□ -2.13
EFCAB3Q8N7B9 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
EFCAB3Q8N7B9 MIR548X-201ENST00000580069 75 ntBASIC1.73□□□□□ -2.13
EFCAB3Q8N7B9 RNU6-246P-201ENST00000384702 107 ntBASIC1.72□□□□□ -2.13
EFCAB3Q8N7B9 HMGN2P22-201ENST00000427588 175 ntBASIC1.72□□□□□ -2.13
EFCAB3Q8N7B9 RNA5SP404-201ENST00000517118 132 ntBASIC1.72□□□□□ -2.13
EFCAB3Q8N7B9 MIR502-201ENST00000606349 86 ntBASIC1.72□□□□□ -2.13
EFCAB3Q8N7B9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
EFCAB3Q8N7B9 MIR9-3-201ENST00000385084 90 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms