Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.21□□□□□ -2.38
KRT28Q7Z3Y7 RNU6-652P-201ENST00000365488 107 ntBASIC0.2□□□□□ -2.38
KRT28Q7Z3Y7 SNORA24B-201ENST00000384176 131 ntBASIC0.2□□□□□ -2.38
KRT28Q7Z3Y7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
KRT28Q7Z3Y7 YWHAEP2-201ENST00000580066 112 ntBASIC0.2□□□□□ -2.38
KRT28Q7Z3Y7 SNORA63.2-201ENST00000362603 126 ntBASIC0.19□□□□□ -2.38
KRT28Q7Z3Y7 RNU6-497P-201ENST00000365316 104 ntBASIC0.19□□□□□ -2.38
KRT28Q7Z3Y7 MIR643-201ENST00000385267 97 ntBASIC0.19□□□□□ -2.38
KRT28Q7Z3Y7 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
KRT28Q7Z3Y7 SNORA18.5-201ENST00000516616 101 ntBASIC0.18□□□□□ -2.38
KRT28Q7Z3Y7 MIR4473-201ENST00000583731 91 ntBASIC0.18□□□□□ -2.38
KRT28Q7Z3Y7 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
KRT28Q7Z3Y7 MIR3925-201ENST00000584674 77 ntBASIC0.18□□□□□ -2.38
KRT28Q7Z3Y7 AP001180.6-201ENST00000584918 159 ntBASIC0.18□□□□□ -2.38
KRT28Q7Z3Y7 SNORD114-31-201ENST00000363219 75 ntBASIC0.17□□□□□ -2.38
KRT28Q7Z3Y7 MIR876-201ENST00000401147 81 ntBASIC0.17□□□□□ -2.38
KRT28Q7Z3Y7 RNU5B-6P-201ENST00000516765 68 ntBASIC0.17□□□□□ -2.38
KRT28Q7Z3Y7 RNU4-32P-201ENST00000363404 141 ntBASIC0.16□□□□□ -2.38
KRT28Q7Z3Y7 MIR604-201ENST00000384880 94 ntBASIC0.16□□□□□ -2.38
KRT28Q7Z3Y7 MIR610-201ENST00000385139 96 ntBASIC0.16□□□□□ -2.38
KRT28Q7Z3Y7 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
KRT28Q7Z3Y7 FGF7P7-201ENST00000514120 227 ntBASIC0.16□□□□□ -2.38
KRT28Q7Z3Y7 AC108676.2-201ENST00000605225 163 ntBASIC0.16□□□□□ -2.38
KRT28Q7Z3Y7 RNU6-633P-201ENST00000362612 103 ntBASIC0.15□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-219P-201ENST00000364728 107 ntBASIC0.15□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-1051P-201ENST00000365471 102 ntBASIC0.15□□□□□ -2.39
KRT28Q7Z3Y7 MIR4668-201ENST00000582284 70 ntBASIC0.15□□□□□ -2.39
KRT28Q7Z3Y7 MIR548AE1-201ENST00000583292 70 ntBASIC0.15□□□□□ -2.39
KRT28Q7Z3Y7 uc_338.10-201ENST00000621872 182 ntBASIC0.15□□□□□ -2.39
KRT28Q7Z3Y7 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 RNU6V-201ENST00000384105 107 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 SNORD90-201ENST00000391145 111 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 MIR1236-201ENST00000408340 102 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 Y_RNA.620-201ENST00000411009 88 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-1052P-201ENST00000411398 104 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-719P-201ENST00000516671 104 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 AC104408.1-201ENST00000605241 170 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 AC084368.1-201ENST00000620935 65 ntBASIC0.14□□□□□ -2.39
KRT28Q7Z3Y7 SNORD115-27-201ENST00000364430 82 ntBASIC0.13□□□□□ -2.39
KRT28Q7Z3Y7 Y_RNA.437-201ENST00000384113 113 ntBASIC0.13□□□□□ -2.39
KRT28Q7Z3Y7 MIR516B1-201ENST00000385211 90 ntBASIC0.13□□□□□ -2.39
KRT28Q7Z3Y7 MIR3140-201ENST00000583685 90 ntBASIC0.13□□□□□ -2.39
KRT28Q7Z3Y7 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
KRT28Q7Z3Y7 SNORD95.1-201ENST00000364099 68 ntBASIC0.12□□□□□ -2.39
KRT28Q7Z3Y7 Y_RNA.220-201ENST00000364244 109 ntBASIC0.12□□□□□ -2.39
KRT28Q7Z3Y7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.12□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-675P-201ENST00000384236 104 ntBASIC0.12□□□□□ -2.39
KRT28Q7Z3Y7 Y_RNA.558-201ENST00000384685 113 ntBASIC0.12□□□□□ -2.39
KRT28Q7Z3Y7 Y_RNA.694-201ENST00000516677 117 ntBASIC0.12□□□□□ -2.39
KRT28Q7Z3Y7 SNORD116-22-201ENST00000384430 92 ntBASIC0.11□□□□□ -2.39
KRT28Q7Z3Y7 RNY1P7-201ENST00000384743 110 ntBASIC0.11□□□□□ -2.39
KRT28Q7Z3Y7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
KRT28Q7Z3Y7 MIR892B-201ENST00000401279 77 ntBASIC0.11□□□□□ -2.39
KRT28Q7Z3Y7 MIR4796-201ENST00000580742 81 ntBASIC0.11□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-54P-201ENST00000365563 107 ntBASIC0.1□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-49P-201ENST00000384256 107 ntBASIC0.1□□□□□ -2.39
KRT28Q7Z3Y7 SNORA75.1-201ENST00000391130 148 ntBASIC0.1□□□□□ -2.39
KRT28Q7Z3Y7 Y_RNA.660-201ENST00000516002 120 ntBASIC0.1□□□□□ -2.39
KRT28Q7Z3Y7 RNU6-844P-201ENST00000517175 102 ntBASIC0.1□□□□□ -2.39
KRT28Q7Z3Y7 MIR593-201ENST00000384856 100 ntBASIC0.09□□□□□ -2.4
KRT28Q7Z3Y7 MIR519C-201ENST00000385053 87 ntBASIC0.09□□□□□ -2.4
KRT28Q7Z3Y7 RNA5SP266-201ENST00000410273 108 ntBASIC0.09□□□□□ -2.4
KRT28Q7Z3Y7 MTATP6P29-201ENST00000415057 132 ntBASIC0.09□□□□□ -2.4
KRT28Q7Z3Y7 AC104692.1-201ENST00000472406 90 ntBASIC0.09□□□□□ -2.4
KRT28Q7Z3Y7 RNA5SP67-201ENST00000516422 131 ntBASIC0.09□□□□□ -2.4
KRT28Q7Z3Y7 SCARNA11.2-201ENST00000517183 154 ntBASIC0.09□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-495P-201ENST00000362995 107 ntBASIC0.08□□□□□ -2.4
KRT28Q7Z3Y7 RNU7-24P-201ENST00000458867 62 ntBASIC0.08□□□□□ -2.4
KRT28Q7Z3Y7 RNU7-153P-201ENST00000516455 62 ntBASIC0.08□□□□□ -2.4
KRT28Q7Z3Y7 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-402P-201ENST00000410678 103 ntBASIC0.07□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-180P-201ENST00000516697 61 ntBASIC0.07□□□□□ -2.4
KRT28Q7Z3Y7 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-1131P-201ENST00000364955 107 ntBASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-154P-201ENST00000384306 106 ntBASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 MIR145-201ENST00000384967 88 ntBASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 SNORD42B-201ENST00000458893 67 ntBASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
KRT28Q7Z3Y7 MIR652-201ENST00000385278 98 ntBASIC0.05□□□□□ -2.4
KRT28Q7Z3Y7 RN7SL660P-201ENST00000614852 299 ntBASIC0.05□□□□□ -2.4
KRT28Q7Z3Y7 SNORD114-29-201ENST00000364819 70 ntBASIC0.04□□□□□ -2.4
KRT28Q7Z3Y7 MIR106A-201ENST00000384870 81 ntBASIC0.04□□□□□ -2.4
KRT28Q7Z3Y7 RNU7-165P-201ENST00000458864 60 ntBASIC0.04□□□□□ -2.4
KRT28Q7Z3Y7 SCARNA17.3-201ENST00000516381 125 ntBASIC0.04□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-267P-201ENST00000516714 103 ntBASIC0.04□□□□□ -2.4
KRT28Q7Z3Y7 RNU7-188P-201ENST00000517063 64 ntBASIC0.04□□□□□ -2.4
KRT28Q7Z3Y7 MIR101-1-201ENST00000362265 75 ntBASIC0.03□□□□□ -2.4
KRT28Q7Z3Y7 RNU5F-1-201ENST00000362507 117 ntBASIC0.03□□□□□ -2.4
KRT28Q7Z3Y7 SNORD75.2-201ENST00000408784 58 ntBASIC0.03□□□□□ -2.4
KRT28Q7Z3Y7 RNA5SP163-201ENST00000410304 99 ntBASIC0.03□□□□□ -2.4
KRT28Q7Z3Y7 snoU13.17-201ENST00000458802 104 ntBASIC0.03□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-175P-201ENST00000516896 107 ntBASIC0.03□□□□□ -2.4
KRT28Q7Z3Y7 RNU6-762P-201ENST00000517107 102 ntBASIC0.03□□□□□ -2.4
KRT28Q7Z3Y7 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
KRT28Q7Z3Y7 RNU6-624P-201ENST00000363411 107 ntBASIC0.02□□□□□ -2.41
KRT28Q7Z3Y7 Y_RNA.593-201ENST00000410292 98 ntBASIC0.02□□□□□ -2.41
KRT28Q7Z3Y7 Y_RNA.610-201ENST00000410681 103 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms