Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 RNU6-1110P-201ENST00000516462 101 ntBASIC2.64□□□□□ -1.99
SAMD1Q6SPF0 MIR3612-201ENST00000579753 87 ntBASIC2.64□□□□□ -1.99
SAMD1Q6SPF0 MIR548AG1-201ENST00000579932 66 ntBASIC2.64□□□□□ -1.99
SAMD1Q6SPF0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.64□□□□□ -1.99
SAMD1Q6SPF0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SAMD1Q6SPF0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
SAMD1Q6SPF0 SNORA64-201ENST00000384674 134 ntBASIC2.63□□□□□ -1.99
SAMD1Q6SPF0 AC243829.3-201ENST00000622177 108 ntBASIC2.63□□□□□ -1.99
SAMD1Q6SPF0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SAMD1Q6SPF0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SAMD1Q6SPF0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SAMD1Q6SPF0 RNU6-1250P-201ENST00000391218 107 ntBASIC2.62□□□□□ -1.99
SAMD1Q6SPF0 SNORA26.9-201ENST00000391322 122 ntBASIC2.62□□□□□ -1.99
SAMD1Q6SPF0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SAMD1Q6SPF0 AP000553.5-201ENST00000641933 54 ntBASIC2.6□□□□□ -1.99
SAMD1Q6SPF0 MIR579-201ENST00000385221 98 ntBASIC2.59□□□□□ -1.99
SAMD1Q6SPF0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.59□□□□□ -1.99
SAMD1Q6SPF0 AC012493.3-201ENST00000604494 112 ntBASIC2.59□□□□□ -1.99
SAMD1Q6SPF0 RNU6-986P-201ENST00000363133 102 ntBASIC2.58□□□□□ -2
SAMD1Q6SPF0 MIR573-201ENST00000384964 99 ntBASIC2.58□□□□□ -2
SAMD1Q6SPF0 MIR5007-201ENST00000583098 95 ntBASIC2.58□□□□□ -2
SAMD1Q6SPF0 MIR6766-201ENST00000622641 72 ntBASIC2.58□□□□□ -2
SAMD1Q6SPF0 RNU6-924P-201ENST00000362926 108 ntBASIC2.57□□□□□ -2
SAMD1Q6SPF0 uc_338.20-201ENST00000621563 178 ntBASIC2.57□□□□□ -2
SAMD1Q6SPF0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SAMD1Q6SPF0 MIR6828-201ENST00000636181 60 ntBASIC2.56□□□□□ -2
SAMD1Q6SPF0 MIR429-201ENST00000362106 83 ntBASIC2.55□□□□□ -2
SAMD1Q6SPF0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SAMD1Q6SPF0 MIR4498-201ENST00000577599 66 ntBASIC2.54□□□□□ -2
SAMD1Q6SPF0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
SAMD1Q6SPF0 FABP5P4-201ENST00000437203 171 ntBASIC2.53□□□□□ -2
SAMD1Q6SPF0 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
SAMD1Q6SPF0 RNU6-458P-201ENST00000384179 107 ntBASIC2.52□□□□□ -2.01
SAMD1Q6SPF0 U6.58-201ENST00000613107 107 ntBASIC2.52□□□□□ -2.01
SAMD1Q6SPF0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.51□□□□□ -2.01
SAMD1Q6SPF0 SNORD115-25-201ENST00000362619 82 ntBASIC2.5□□□□□ -2.01
SAMD1Q6SPF0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SAMD1Q6SPF0 RNU7-154P-201ENST00000516194 62 ntBASIC2.49□□□□□ -2.01
SAMD1Q6SPF0 RNU6-295P-201ENST00000516901 104 ntBASIC2.49□□□□□ -2.01
SAMD1Q6SPF0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.49□□□□□ -2.01
SAMD1Q6SPF0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.49□□□□□ -2.01
SAMD1Q6SPF0 RNA5SP268-201ENST00000516828 124 ntBASIC2.48□□□□□ -2.01
SAMD1Q6SPF0 SNORA70.25-201ENST00000612741 95 ntBASIC2.48□□□□□ -2.01
SAMD1Q6SPF0 Y_RNA.355-201ENST00000365462 98 ntBASIC2.47□□□□□ -2.01
SAMD1Q6SPF0 SNORA25-201ENST00000384384 134 ntBASIC2.47□□□□□ -2.01
SAMD1Q6SPF0 AC244090.1-201ENST00000441884 93 ntBASIC2.47□□□□□ -2.01
SAMD1Q6SPF0 MIR4285-201ENST00000581001 85 ntBASIC2.47□□□□□ -2.01
SAMD1Q6SPF0 AC025627.3-201ENST00000582078 182 ntBASIC2.47□□□□□ -2.01
SAMD1Q6SPF0 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
SAMD1Q6SPF0 MIR20A-201ENST00000362279 71 ntBASIC2.46□□□□□ -2.02
SAMD1Q6SPF0 RNU1-17P-201ENST00000363022 152 ntBASIC2.46□□□□□ -2.02
SAMD1Q6SPF0 SNORA36.1-201ENST00000363424 132 ntBASIC2.46□□□□□ -2.02
SAMD1Q6SPF0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SAMD1Q6SPF0 RNU6-1206P-201ENST00000516339 103 ntBASIC2.46□□□□□ -2.02
SAMD1Q6SPF0 RNU6-337P-201ENST00000391243 106 ntBASIC2.45□□□□□ -2.02
SAMD1Q6SPF0 MIR548AL-201ENST00000578416 97 ntBASIC2.45□□□□□ -2.02
SAMD1Q6SPF0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.45□□□□□ -2.02
SAMD1Q6SPF0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SAMD1Q6SPF0 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
SAMD1Q6SPF0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SAMD1Q6SPF0 RNU7-151P-201ENST00000516930 53 ntBASIC2.43□□□□□ -2.02
SAMD1Q6SPF0 MIR4752-201ENST00000579672 72 ntBASIC2.43□□□□□ -2.02
SAMD1Q6SPF0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SAMD1Q6SPF0 Y_RNA.69-201ENST00000362885 109 ntBASIC2.42□□□□□ -2.02
SAMD1Q6SPF0 RNU7-160P-201ENST00000516660 62 ntBASIC2.42□□□□□ -2.02
SAMD1Q6SPF0 MIR7107-201ENST00000611489 80 ntBASIC2.42□□□□□ -2.02
SAMD1Q6SPF0 MIR6773-201ENST00000612812 74 ntBASIC2.42□□□□□ -2.02
SAMD1Q6SPF0 U2.18-201ENST00000622185 84 ntBASIC2.41□□□□□ -2.02
SAMD1Q6SPF0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SAMD1Q6SPF0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SAMD1Q6SPF0 RNA5SP327-201ENST00000362494 101 ntBASIC2.4□□□□□ -2.03
SAMD1Q6SPF0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.4□□□□□ -2.03
SAMD1Q6SPF0 HMGN2P22-201ENST00000427588 175 ntBASIC2.4□□□□□ -2.03
SAMD1Q6SPF0 MIRLET7G-201ENST00000362280 84 ntBASIC2.39□□□□□ -2.03
SAMD1Q6SPF0 RNU6-598P-201ENST00000364017 105 ntBASIC2.39□□□□□ -2.03
SAMD1Q6SPF0 MIR329-2-201ENST00000385029 84 ntBASIC2.39□□□□□ -2.03
SAMD1Q6SPF0 AC108667.1-201ENST00000428618 249 ntBASIC2.39□□□□□ -2.03
SAMD1Q6SPF0 RNA5SP470-201ENST00000516463 106 ntBASIC2.39□□□□□ -2.03
SAMD1Q6SPF0 snoU13.31-201ENST00000607291 104 ntBASIC2.39□□□□□ -2.03
SAMD1Q6SPF0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SAMD1Q6SPF0 MIR489-201ENST00000384923 84 ntBASIC2.38□□□□□ -2.03
SAMD1Q6SPF0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SAMD1Q6SPF0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
SAMD1Q6SPF0 MIR18A-201ENST00000362310 71 ntBASIC2.37□□□□□ -2.03
SAMD1Q6SPF0 RNA5SP37-201ENST00000365420 130 ntBASIC2.37□□□□□ -2.03
SAMD1Q6SPF0 RNY1P8-201ENST00000383970 114 ntBASIC2.37□□□□□ -2.03
SAMD1Q6SPF0 MIR499A-201ENST00000384903 122 ntBASIC2.37□□□□□ -2.03
SAMD1Q6SPF0 RNU6-696P-201ENST00000390834 107 ntBASIC2.37□□□□□ -2.03
SAMD1Q6SPF0 RNA5SP364-201ENST00000516938 78 ntBASIC2.37□□□□□ -2.03
SAMD1Q6SPF0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
SAMD1Q6SPF0 MIR583-201ENST00000384846 75 ntBASIC2.36□□□□□ -2.03
SAMD1Q6SPF0 SNORD2-201ENST00000459163 69 ntBASIC2.36□□□□□ -2.03
SAMD1Q6SPF0 SNORD124-201ENST00000459577 104 ntBASIC2.36□□□□□ -2.03
SAMD1Q6SPF0 MIR6845-201ENST00000613182 61 ntBASIC2.36□□□□□ -2.03
SAMD1Q6SPF0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.35□□□□□ -2.03
SAMD1Q6SPF0 MIR8070-201ENST00000616510 88 ntBASIC2.35□□□□□ -2.03
SAMD1Q6SPF0 RNA5SP338-201ENST00000410495 85 ntBASIC2.34□□□□□ -2.03
SAMD1Q6SPF0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SAMD1Q6SPF0 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
SAMD1Q6SPF0 AC003989.2-201ENST00000440224 169 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms