Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RNU6-644P-201ENST00000391155 98 ntBASIC-1.03□□□□□ -2.57
PTPN20Q4JDL3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
PTPN20Q4JDL3 MTND4LP9-201ENST00000427694 174 ntBASIC-1.03□□□□□ -2.57
PTPN20Q4JDL3 SCARNA17-201ENST00000516183 144 ntBASIC-1.03□□□□□ -2.57
PTPN20Q4JDL3 MIR4499-201ENST00000584834 69 ntBASIC-1.03□□□□□ -2.57
PTPN20Q4JDL3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.04□□□□□ -2.58
PTPN20Q4JDL3 AC068339.1-201ENST00000526965 141 ntBASIC-1.04□□□□□ -2.58
PTPN20Q4JDL3 MIR3140-201ENST00000583685 90 ntBASIC-1.04□□□□□ -2.58
PTPN20Q4JDL3 AL353621.2-201ENST00000605340 133 ntBASIC-1.04□□□□□ -2.58
PTPN20Q4JDL3 uc_338.19-201ENST00000616808 99 ntBASIC-1.04□□□□□ -2.58
PTPN20Q4JDL3 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.05□□□□□ -2.58
PTPN20Q4JDL3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.05□□□□□ -2.58
PTPN20Q4JDL3 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.05□□□□□ -2.58
PTPN20Q4JDL3 MIR147A-201ENST00000385079 72 ntBASIC-1.05□□□□□ -2.58
PTPN20Q4JDL3 MIR548U-201ENST00000390728 81 ntBASIC-1.05□□□□□ -2.58
PTPN20Q4JDL3 SNORD4B-201ENST00000459083 72 ntBASIC-1.05□□□□□ -2.58
PTPN20Q4JDL3 AC104996.3-201ENST00000590718 94 ntBASIC-1.05□□□□□ -2.58
PTPN20Q4JDL3 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.06□□□□□ -2.58
PTPN20Q4JDL3 SNORD45B-201ENST00000364617 72 ntBASIC-1.06□□□□□ -2.58
PTPN20Q4JDL3 RNU6-813P-201ENST00000384691 107 ntBASIC-1.06□□□□□ -2.58
PTPN20Q4JDL3 AC140658.3-201ENST00000567603 271 ntBASIC-1.06□□□□□ -2.58
PTPN20Q4JDL3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.06□□□□□ -2.58
PTPN20Q4JDL3 AL157777.2-201ENST00000258070 137 ntBASIC-1.07□□□□□ -2.58
PTPN20Q4JDL3 RNU6-886P-201ENST00000384319 105 ntBASIC-1.07□□□□□ -2.58
PTPN20Q4JDL3 SNORD64-201ENST00000386683 67 ntBASIC-1.07□□□□□ -2.58
PTPN20Q4JDL3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.07□□□□□ -2.58
PTPN20Q4JDL3 snoR1.1-201ENST00000628177 80 ntBASIC-1.07□□□□□ -2.58
PTPN20Q4JDL3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.08□□□□□ -2.58
PTPN20Q4JDL3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.08□□□□□ -2.58
PTPN20Q4JDL3 RNU6-182P-201ENST00000516970 105 ntBASIC-1.08□□□□□ -2.58
PTPN20Q4JDL3 MIR4719-201ENST00000585233 84 ntBASIC-1.08□□□□□ -2.58
PTPN20Q4JDL3 AC103810.7-201ENST00000607821 91 ntBASIC-1.08□□□□□ -2.58
PTPN20Q4JDL3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 MIR5009-201ENST00000578736 100 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 MIR382-201ENST00000637119 76 ntBASIC-1.09□□□□□ -2.58
PTPN20Q4JDL3 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.1□□□□□ -2.59
PTPN20Q4JDL3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.1□□□□□ -2.59
PTPN20Q4JDL3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.1□□□□□ -2.59
PTPN20Q4JDL3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.11□□□□□ -2.59
PTPN20Q4JDL3 SNORA40-201ENST00000388090 126 ntBASIC-1.11□□□□□ -2.59
PTPN20Q4JDL3 RNU6-257P-201ENST00000410238 98 ntBASIC-1.11□□□□□ -2.59
PTPN20Q4JDL3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.11□□□□□ -2.59
PTPN20Q4JDL3 MIR4777-201ENST00000583710 86 ntBASIC-1.11□□□□□ -2.59
PTPN20Q4JDL3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.11□□□□□ -2.59
PTPN20Q4JDL3 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 RNU7-107P-201ENST00000459121 61 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 RNU7-200P-201ENST00000516105 62 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 MIR378F-201ENST00000578143 78 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 MIR3914-2-201ENST00000637339 95 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 AC099654.10-201ENST00000640395 161 ntBASIC-1.12□□□□□ -2.59
PTPN20Q4JDL3 MIR548A1-201ENST00000385041 97 ntBASIC-1.13□□□□□ -2.59
PTPN20Q4JDL3 RNA5SP292-201ENST00000390974 118 ntBASIC-1.13□□□□□ -2.59
PTPN20Q4JDL3 SNORD90-201ENST00000391145 111 ntBASIC-1.13□□□□□ -2.59
PTPN20Q4JDL3 AC021146.9-201ENST00000512503 156 ntBASIC-1.13□□□□□ -2.59
PTPN20Q4JDL3 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.13□□□□□ -2.59
PTPN20Q4JDL3 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.14□□□□□ -2.59
PTPN20Q4JDL3 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.15□□□□□ -2.59
PTPN20Q4JDL3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.15□□□□□ -2.59
PTPN20Q4JDL3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.15□□□□□ -2.59
PTPN20Q4JDL3 MIR124-2-201ENST00000385081 109 ntBASIC-1.15□□□□□ -2.59
PTPN20Q4JDL3 RNU6-519P-201ENST00000410590 108 ntBASIC-1.15□□□□□ -2.59
PTPN20Q4JDL3 MIR548Z-201ENST00000584743 97 ntBASIC-1.15□□□□□ -2.59
PTPN20Q4JDL3 SNORA18.5-201ENST00000516616 101 ntBASIC-1.16□□□□□ -2.6
PTPN20Q4JDL3 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.16□□□□□ -2.6
PTPN20Q4JDL3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.16□□□□□ -2.6
PTPN20Q4JDL3 AC090617.8-201ENST00000623339 167 ntBASIC-1.16□□□□□ -2.6
PTPN20Q4JDL3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
PTPN20Q4JDL3 MIR4464-201ENST00000580818 92 ntBASIC-1.17□□□□□ -2.6
PTPN20Q4JDL3 AC012531.4-201ENST00000616509 177 ntBASIC-1.17□□□□□ -2.6
PTPN20Q4JDL3 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.18□□□□□ -2.6
PTPN20Q4JDL3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.18□□□□□ -2.6
PTPN20Q4JDL3 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.18□□□□□ -2.6
PTPN20Q4JDL3 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.18□□□□□ -2.6
PTPN20Q4JDL3 SNORD33.1-201ENST00000516213 88 ntBASIC-1.18□□□□□ -2.6
PTPN20Q4JDL3 MIR4324-201ENST00000584846 72 ntBASIC-1.18□□□□□ -2.6
PTPN20Q4JDL3 U6.96-201ENST00000636425 70 ntBASIC-1.18□□□□□ -2.6
PTPN20Q4JDL3 MIR409-201ENST00000362237 79 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 MTATP6P29-201ENST00000415057 132 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 snoU13.17-201ENST00000458802 104 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 RNU6-795P-201ENST00000516323 103 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 RNY1P9-201ENST00000532431 109 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 AC006254.2-201ENST00000603259 279 ntBASIC-1.19□□□□□ -2.6
PTPN20Q4JDL3 RNY1P5-201ENST00000383890 115 ntBASIC-1.2□□□□□ -2.6
PTPN20Q4JDL3 RNU6-260P-201ENST00000384092 107 ntBASIC-1.2□□□□□ -2.6
PTPN20Q4JDL3 RNU6-80P-201ENST00000384195 107 ntBASIC-1.2□□□□□ -2.6
PTPN20Q4JDL3 RNU6-971P-201ENST00000516920 106 ntBASIC-1.2□□□□□ -2.6
PTPN20Q4JDL3 U6.95-201ENST00000636931 70 ntBASIC-1.2□□□□□ -2.6
PTPN20Q4JDL3 RNU6-208P-201ENST00000362431 107 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms