Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SNX3P1X-201ENST00000414887 175 ntBASIC-2.88□□□□□ -2.87
LSM3P62310 RNU5F-1-201ENST00000362507 117 ntBASIC-2.89□□□□□ -2.87
LSM3P62310 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.89□□□□□ -2.87
LSM3P62310 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.89□□□□□ -2.87
LSM3P62310 RNY3P1-201ENST00000365085 102 ntBASIC-2.89□□□□□ -2.87
LSM3P62310 RNU2-38P-201ENST00000410856 79 ntBASIC-2.89□□□□□ -2.87
LSM3P62310 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.89□□□□□ -2.87
LSM3P62310 AC113195.1-201ENST00000579952 141 ntBASIC-2.89□□□□□ -2.87
LSM3P62310 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.9□□□□□ -2.87
LSM3P62310 MIR601-201ENST00000385256 79 ntBASIC-2.9□□□□□ -2.87
LSM3P62310 SNORD37.2-201ENST00000391075 66 ntBASIC-2.9□□□□□ -2.87
LSM3P62310 RNU6-630P-201ENST00000391258 106 ntBASIC-2.9□□□□□ -2.87
LSM3P62310 U6.81-201ENST00000612550 106 ntBASIC-2.9□□□□□ -2.87
LSM3P62310 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.91□□□□□ -2.88
LSM3P62310 RNY4P28-201ENST00000365281 93 ntBASIC-2.91□□□□□ -2.88
LSM3P62310 MIR520D-201ENST00000385002 87 ntBASIC-2.91□□□□□ -2.88
LSM3P62310 RNU6-519P-201ENST00000410590 108 ntBASIC-2.91□□□□□ -2.88
LSM3P62310 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.91□□□□□ -2.88
LSM3P62310 MIR3121-201ENST00000579680 77 ntBASIC-2.91□□□□□ -2.88
LSM3P62310 AC103810.7-201ENST00000607821 91 ntBASIC-2.91□□□□□ -2.88
LSM3P62310 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.92□□□□□ -2.88
LSM3P62310 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.92□□□□□ -2.88
LSM3P62310 RNU6-644P-201ENST00000391155 98 ntBASIC-2.92□□□□□ -2.88
LSM3P62310 MIR664B-201ENST00000626756 61 ntBASIC-2.92□□□□□ -2.88
LSM3P62310 MIR369-201ENST00000362155 70 ntBASIC-2.93□□□□□ -2.88
LSM3P62310 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.93□□□□□ -2.88
LSM3P62310 RNA5SP136-201ENST00000410906 107 ntBASIC-2.93□□□□□ -2.88
LSM3P62310 MIR3613-201ENST00000579844 87 ntBASIC-2.93□□□□□ -2.88
LSM3P62310 MIR4441-201ENST00000582623 100 ntBASIC-2.93□□□□□ -2.88
LSM3P62310 MIR3123-201ENST00000583417 75 ntBASIC-2.93□□□□□ -2.88
LSM3P62310 MIR365A-201ENST00000362260 87 ntBASIC-2.94□□□□□ -2.88
LSM3P62310 AL589823.1-201ENST00000429577 183 ntBASIC-2.94□□□□□ -2.88
LSM3P62310 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.95□□□□□ -2.88
LSM3P62310 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.95□□□□□ -2.88
LSM3P62310 RNU6-563P-201ENST00000364872 108 ntBASIC-2.95□□□□□ -2.88
LSM3P62310 U2.7-201ENST00000619197 100 ntBASIC-2.95□□□□□ -2.88
LSM3P62310 AC139792.2-201ENST00000624218 587 ntBASIC-2.95□□□□□ -2.88
LSM3P62310 RNU6-832P-201ENST00000363319 107 ntBASIC-2.96□□□□□ -2.88
LSM3P62310 RNU6-458P-201ENST00000384179 107 ntBASIC-2.96□□□□□ -2.88
LSM3P62310 MIR1302-6-201ENST00000408466 90 ntBASIC-2.96□□□□□ -2.88
LSM3P62310 U6.58-201ENST00000613107 107 ntBASIC-2.96□□□□□ -2.88
LSM3P62310 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.97□□□□□ -2.88
LSM3P62310 MIR4694-201ENST00000578534 80 ntBASIC-2.97□□□□□ -2.88
LSM3P62310 AP000770.2-201ENST00000623694 100 ntBASIC-2.97□□□□□ -2.88
LSM3P62310 RNU6-841P-201ENST00000383872 107 ntBASIC-2.98□□□□□ -2.89
LSM3P62310 RNU6-656P-201ENST00000516785 107 ntBASIC-2.98□□□□□ -2.89
LSM3P62310 AC120024.2-201ENST00000576526 175 ntBASIC-2.98□□□□□ -2.89
LSM3P62310 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.98□□□□□ -2.89
LSM3P62310 MIR548AM-201ENST00000584298 74 ntBASIC-2.98□□□□□ -2.89
LSM3P62310 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.99□□□□□ -2.89
LSM3P62310 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.99□□□□□ -2.89
LSM3P62310 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.99□□□□□ -2.89
LSM3P62310 SNORD116-4-201ENST00000384733 96 ntBASIC-2.99□□□□□ -2.89
LSM3P62310 RNU6-696P-201ENST00000390834 107 ntBASIC-2.99□□□□□ -2.89
LSM3P62310 RNU6-980P-201ENST00000516925 103 ntBASIC-2.99□□□□□ -2.89
LSM3P62310 RNY4P6-201ENST00000363667 96 ntBASIC-3□□□□□ -2.89
LSM3P62310 Y_RNA.483-201ENST00000384380 101 ntBASIC-3□□□□□ -2.89
LSM3P62310 Y_RNA.512-201ENST00000384518 102 ntBASIC-3□□□□□ -2.89
LSM3P62310 Y_RNA.626-201ENST00000411288 95 ntBASIC-3□□□□□ -2.89
LSM3P62310 RNU6-807P-201ENST00000516805 107 ntBASIC-3□□□□□ -2.89
LSM3P62310 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.01□□□□□ -2.89
LSM3P62310 RNU6-781P-201ENST00000516377 101 ntBASIC-3.01□□□□□ -2.89
LSM3P62310 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.02□□□□□ -2.89
LSM3P62310 Y_RNA.352-201ENST00000365439 102 ntBASIC-3.02□□□□□ -2.89
LSM3P62310 RNU6-813P-201ENST00000384691 107 ntBASIC-3.02□□□□□ -2.89
LSM3P62310 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.02□□□□□ -2.89
LSM3P62310 RNU6-460P-201ENST00000391158 108 ntBASIC-3.02□□□□□ -2.89
LSM3P62310 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.03□□□□□ -2.89
LSM3P62310 RNU6-918P-201ENST00000391219 106 ntBASIC-3.03□□□□□ -2.89
LSM3P62310 Y_RNA.616-201ENST00000410835 95 ntBASIC-3.03□□□□□ -2.89
LSM3P62310 AC130289.1-201ENST00000577321 73 ntBASIC-3.03□□□□□ -2.89
LSM3P62310 RNY3P2-201ENST00000362918 102 ntBASIC-3.04□□□□□ -2.9
LSM3P62310 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.04□□□□□ -2.9
LSM3P62310 RNU6-915P-201ENST00000364943 103 ntBASIC-3.04□□□□□ -2.9
LSM3P62310 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.04□□□□□ -2.9
LSM3P62310 MIR548C-201ENST00000384815 97 ntBASIC-3.04□□□□□ -2.9
LSM3P62310 MIR4439-201ENST00000583746 80 ntBASIC-3.04□□□□□ -2.9
LSM3P62310 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.04□□□□□ -2.9
LSM3P62310 Y_RNA.145-201ENST00000363527 102 ntBASIC-3.05□□□□□ -2.9
LSM3P62310 SNORD42.2-201ENST00000365570 69 ntBASIC-3.05□□□□□ -2.9
LSM3P62310 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.05□□□□□ -2.9
LSM3P62310 RNU6-239P-201ENST00000390990 99 ntBASIC-3.05□□□□□ -2.9
LSM3P62310 RNU4-88P-201ENST00000411220 86 ntBASIC-3.05□□□□□ -2.9
LSM3P62310 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.05□□□□□ -2.9
LSM3P62310 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.06□□□□□ -2.9
LSM3P62310 RNU6-312P-201ENST00000364629 107 ntBASIC-3.06□□□□□ -2.9
LSM3P62310 RNA5SP331-201ENST00000364986 107 ntBASIC-3.06□□□□□ -2.9
LSM3P62310 RNU6-258P-201ENST00000390884 101 ntBASIC-3.06□□□□□ -2.9
LSM3P62310 AL118496.2-201ENST00000448300 230 ntBASIC-3.06□□□□□ -2.9
LSM3P62310 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.06□□□□□ -2.9
LSM3P62310 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.07□□□□□ -2.9
LSM3P62310 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.07□□□□□ -2.9
LSM3P62310 Y_RNA.488-201ENST00000384403 102 ntBASIC-3.07□□□□□ -2.9
LSM3P62310 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.07□□□□□ -2.9
LSM3P62310 RNU7-121P-201ENST00000516604 62 ntBASIC-3.07□□□□□ -2.9
LSM3P62310 MIR23C-201ENST00000579846 100 ntBASIC-3.07□□□□□ -2.9
LSM3P62310 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.07□□□□□ -2.9
LSM3P62310 RNU6-598P-201ENST00000364017 105 ntBASIC-3.08□□□□□ -2.9
LSM3P62310 MTND2P23-201ENST00000422990 651 ntBASIC-3.08□□□□□ -2.9
LSM3P62310 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.08□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms