Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 HMGN2P22-201ENST00000427588 175 ntBASIC0.4□□□□□ -2.35
COPB1P53618 RNU7-171P-201ENST00000459581 62 ntBASIC0.39□□□□□ -2.35
COPB1P53618 YWHAEP2-201ENST00000580066 112 ntBASIC0.39□□□□□ -2.35
COPB1P53618 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
COPB1P53618 Y_RNA.426-201ENST00000384068 113 ntBASIC0.38□□□□□ -2.35
COPB1P53618 RNU6V-201ENST00000384105 107 ntBASIC0.38□□□□□ -2.35
COPB1P53618 RNY4P29-201ENST00000410801 97 ntBASIC0.38□□□□□ -2.35
COPB1P53618 RNU5B-6P-201ENST00000516765 68 ntBASIC0.38□□□□□ -2.35
COPB1P53618 Y_RNA.68-201ENST00000362881 102 ntBASIC0.37□□□□□ -2.35
COPB1P53618 Y_RNA.388-201ENST00000383919 113 ntBASIC0.37□□□□□ -2.35
COPB1P53618 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
COPB1P53618 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
COPB1P53618 RNU6-1177P-201ENST00000391058 104 ntBASIC0.37□□□□□ -2.35
COPB1P53618 MIR1302-4-201ENST00000408701 150 ntBASIC0.37□□□□□ -2.35
COPB1P53618 Y_RNA.607-201ENST00000410597 98 ntBASIC0.37□□□□□ -2.35
COPB1P53618 Y_RNA.681-201ENST00000516445 113 ntBASIC0.37□□□□□ -2.35
COPB1P53618 RNU5F-1-201ENST00000362507 117 ntBASIC0.36□□□□□ -2.35
COPB1P53618 Y_RNA.125-201ENST00000363371 111 ntBASIC0.36□□□□□ -2.35
COPB1P53618 RNA5SP62-201ENST00000363457 110 ntBASIC0.36□□□□□ -2.35
COPB1P53618 RNA5SP128-201ENST00000365305 116 ntBASIC0.36□□□□□ -2.35
COPB1P53618 RNU6-54P-201ENST00000365563 107 ntBASIC0.36□□□□□ -2.35
COPB1P53618 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
COPB1P53618 MIR501-201ENST00000390204 84 ntBASIC0.36□□□□□ -2.35
COPB1P53618 AC108740.1-201ENST00000498629 225 ntBASIC0.36□□□□□ -2.35
COPB1P53618 RNU6-557P-201ENST00000516842 110 ntBASIC0.36□□□□□ -2.35
COPB1P53618 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
COPB1P53618 RNU6-495P-201ENST00000362995 107 ntBASIC0.35□□□□□ -2.35
COPB1P53618 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
COPB1P53618 RNU6-1276P-201ENST00000365372 104 ntBASIC0.35□□□□□ -2.35
COPB1P53618 Y_RNA.437-201ENST00000384113 113 ntBASIC0.35□□□□□ -2.35
COPB1P53618 SNORA26.2-201ENST00000390922 122 ntBASIC0.35□□□□□ -2.35
COPB1P53618 AL450471.1-201ENST00000447509 127 ntBASIC0.35□□□□□ -2.35
COPB1P53618 AC097510.1-201ENST00000510945 133 ntBASIC0.35□□□□□ -2.35
COPB1P53618 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
COPB1P53618 U7.6-201ENST00000610841 64 ntBASIC0.35□□□□□ -2.35
COPB1P53618 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
COPB1P53618 RNU6-592P-201ENST00000411333 103 ntBASIC0.34□□□□□ -2.36
COPB1P53618 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.34□□□□□ -2.36
COPB1P53618 MIR548AE1-201ENST00000583292 70 ntBASIC0.34□□□□□ -2.36
COPB1P53618 RNU6-824P-201ENST00000363724 104 ntBASIC0.33□□□□□ -2.36
COPB1P53618 RNU6-478P-201ENST00000363904 110 ntBASIC0.33□□□□□ -2.36
COPB1P53618 RNU6-242P-201ENST00000384359 107 ntBASIC0.33□□□□□ -2.36
COPB1P53618 SNORD77.2-201ENST00000391045 68 ntBASIC0.33□□□□□ -2.36
COPB1P53618 RNU7-24P-201ENST00000458867 62 ntBASIC0.33□□□□□ -2.36
COPB1P53618 SNORD42B-201ENST00000458893 67 ntBASIC0.33□□□□□ -2.36
COPB1P53618 AC069113.3-201ENST00000521019 150 ntBASIC0.33□□□□□ -2.36
COPB1P53618 MIR4666B-201ENST00000578142 81 ntBASIC0.33□□□□□ -2.36
COPB1P53618 MIR4473-201ENST00000583731 91 ntBASIC0.33□□□□□ -2.36
COPB1P53618 MIR4677-201ENST00000584153 80 ntBASIC0.33□□□□□ -2.36
COPB1P53618 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
COPB1P53618 RNU6-208P-201ENST00000362431 107 ntBASIC0.32□□□□□ -2.36
COPB1P53618 Y_RNA.407-201ENST00000383986 113 ntBASIC0.32□□□□□ -2.36
COPB1P53618 RNU6-787P-201ENST00000384032 107 ntBASIC0.32□□□□□ -2.36
COPB1P53618 Y_RNA.606-201ENST00000410579 103 ntBASIC0.32□□□□□ -2.36
COPB1P53618 AC073261.1-201ENST00000429409 121 ntBASIC0.32□□□□□ -2.36
COPB1P53618 Y_RNA.660-201ENST00000516002 120 ntBASIC0.32□□□□□ -2.36
COPB1P53618 RNU6-1108P-201ENST00000516308 104 ntBASIC0.32□□□□□ -2.36
COPB1P53618 MIR499B-201ENST00000636498 73 ntBASIC0.32□□□□□ -2.36
COPB1P53618 SNORA9.1-201ENST00000362412 131 ntBASIC0.31□□□□□ -2.36
COPB1P53618 RNU6-161P-201ENST00000363051 106 ntBASIC0.31□□□□□ -2.36
COPB1P53618 Y_RNA.264-201ENST00000364665 102 ntBASIC0.31□□□□□ -2.36
COPB1P53618 Y_RNA.316-201ENST00000365118 111 ntBASIC0.31□□□□□ -2.36
COPB1P53618 RNU6-129P-201ENST00000391022 107 ntBASIC0.31□□□□□ -2.36
COPB1P53618 RNA5SP63-201ENST00000391225 112 ntBASIC0.31□□□□□ -2.36
COPB1P53618 U6.81-201ENST00000612550 106 ntBASIC0.31□□□□□ -2.36
COPB1P53618 SNORD75.2-201ENST00000408784 58 ntBASIC0.3□□□□□ -2.36
COPB1P53618 uc_338.10-201ENST00000621872 182 ntBASIC0.3□□□□□ -2.36
COPB1P53618 MIRLET7A1-201ENST00000362295 80 ntBASIC0.29□□□□□ -2.36
COPB1P53618 RNA5SP173-201ENST00000364857 136 ntBASIC0.29□□□□□ -2.36
COPB1P53618 RNU6-382P-201ENST00000365181 106 ntBASIC0.29□□□□□ -2.36
COPB1P53618 MIR652-201ENST00000385278 98 ntBASIC0.29□□□□□ -2.36
COPB1P53618 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
COPB1P53618 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
COPB1P53618 MIR3925-201ENST00000584674 77 ntBASIC0.29□□□□□ -2.36
COPB1P53618 Y_RNA.178-201ENST00000363832 102 ntBASIC0.28□□□□□ -2.36
COPB1P53618 RNU6-340P-201ENST00000364005 107 ntBASIC0.28□□□□□ -2.36
COPB1P53618 RNU6-686P-201ENST00000364839 107 ntBASIC0.28□□□□□ -2.36
COPB1P53618 RNU6-573P-201ENST00000383938 106 ntBASIC0.28□□□□□ -2.36
COPB1P53618 YWHAEP3-201ENST00000582767 121 ntBASIC0.28□□□□□ -2.36
COPB1P53618 RNU7-129P-201ENST00000516128 62 ntBASIC0.27□□□□□ -2.37
COPB1P53618 RNU6-782P-201ENST00000516852 104 ntBASIC0.27□□□□□ -2.37
COPB1P53618 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.27□□□□□ -2.37
COPB1P53618 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
COPB1P53618 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
COPB1P53618 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
COPB1P53618 Y_RNA.12-201ENST00000362393 112 ntBASIC0.26□□□□□ -2.37
COPB1P53618 RNU6-652P-201ENST00000365488 107 ntBASIC0.26□□□□□ -2.37
COPB1P53618 MIR516B1-201ENST00000385211 90 ntBASIC0.26□□□□□ -2.37
COPB1P53618 RNU6-315P-201ENST00000362666 107 ntBASIC0.25□□□□□ -2.37
COPB1P53618 SNORD114-4-201ENST00000363962 75 ntBASIC0.25□□□□□ -2.37
COPB1P53618 Y_RNA.371-201ENST00000365591 113 ntBASIC0.25□□□□□ -2.37
COPB1P53618 RNU6-154P-201ENST00000384306 106 ntBASIC0.25□□□□□ -2.37
COPB1P53618 SCARNA17.3-201ENST00000516381 125 ntBASIC0.25□□□□□ -2.37
COPB1P53618 MIR1245B-201ENST00000636115 69 ntBASIC0.25□□□□□ -2.37
COPB1P53618 MIR4773-1-201ENST00000637203 78 ntBASIC0.25□□□□□ -2.37
COPB1P53618 Y_RNA.313-201ENST00000365095 103 ntBASIC0.24□□□□□ -2.37
COPB1P53618 Y_RNA.433-201ENST00000384089 102 ntBASIC0.24□□□□□ -2.37
COPB1P53618 MIR876-201ENST00000401147 81 ntBASIC0.24□□□□□ -2.37
COPB1P53618 MIR548H2-201ENST00000408874 88 ntBASIC0.24□□□□□ -2.37
COPB1P53618 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 308.5 ms