Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 Y_RNA.125-201ENST00000363371 111 ntBASIC0.24□□□□□ -2.37
SHC1P29353 RNA5SP128-201ENST00000365305 116 ntBASIC0.24□□□□□ -2.37
SHC1P29353 RNU6-820P-201ENST00000384273 107 ntBASIC0.24□□□□□ -2.37
SHC1P29353 RNY4P29-201ENST00000410801 97 ntBASIC0.24□□□□□ -2.37
SHC1P29353 AC073261.1-201ENST00000429409 121 ntBASIC0.24□□□□□ -2.37
SHC1P29353 AL450471.1-201ENST00000447509 127 ntBASIC0.24□□□□□ -2.37
SHC1P29353 SNORD42B-201ENST00000458893 67 ntBASIC0.24□□□□□ -2.37
SHC1P29353 MIR4473-201ENST00000583731 91 ntBASIC0.24□□□□□ -2.37
SHC1P29353 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
SHC1P29353 RNU6-824P-201ENST00000363724 104 ntBASIC0.23□□□□□ -2.37
SHC1P29353 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
SHC1P29353 Y_RNA.437-201ENST00000384113 113 ntBASIC0.23□□□□□ -2.37
SHC1P29353 RNU6-1152P-201ENST00000384576 107 ntBASIC0.23□□□□□ -2.37
SHC1P29353 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
SHC1P29353 RNU6-1177P-201ENST00000391058 104 ntBASIC0.23□□□□□ -2.37
SHC1P29353 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
SHC1P29353 SNORA9.1-201ENST00000362412 131 ntBASIC0.22□□□□□ -2.37
SHC1P29353 RNU6-495P-201ENST00000362995 107 ntBASIC0.22□□□□□ -2.37
SHC1P29353 RNU6-161P-201ENST00000363051 106 ntBASIC0.22□□□□□ -2.37
SHC1P29353 RNU6-478P-201ENST00000363904 110 ntBASIC0.22□□□□□ -2.37
SHC1P29353 RNU6-787P-201ENST00000384032 107 ntBASIC0.22□□□□□ -2.37
SHC1P29353 Y_RNA.426-201ENST00000384068 113 ntBASIC0.22□□□□□ -2.37
SHC1P29353 Y_RNA.607-201ENST00000410597 98 ntBASIC0.22□□□□□ -2.37
SHC1P29353 RNU7-171P-201ENST00000459581 62 ntBASIC0.22□□□□□ -2.37
SHC1P29353 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
SHC1P29353 MIR4677-201ENST00000584153 80 ntBASIC0.22□□□□□ -2.37
SHC1P29353 MIR3925-201ENST00000584674 77 ntBASIC0.22□□□□□ -2.37
SHC1P29353 MIR548AD-201ENST00000584780 82 ntBASIC0.22□□□□□ -2.37
SHC1P29353 uc_338.10-201ENST00000621872 182 ntBASIC0.22□□□□□ -2.37
SHC1P29353 RNU6-1276P-201ENST00000365372 104 ntBASIC0.21□□□□□ -2.38
SHC1P29353 RNU6-573P-201ENST00000383938 106 ntBASIC0.21□□□□□ -2.38
SHC1P29353 MIR652-201ENST00000385278 98 ntBASIC0.21□□□□□ -2.38
SHC1P29353 AC097510.1-201ENST00000510945 133 ntBASIC0.21□□□□□ -2.38
SHC1P29353 RNU7-129P-201ENST00000516128 62 ntBASIC0.21□□□□□ -2.38
SHC1P29353 RNU6-1108P-201ENST00000516308 104 ntBASIC0.21□□□□□ -2.38
SHC1P29353 MIR924-201ENST00000638017 53 ntBASIC0.21□□□□□ -2.38
SHC1P29353 RNU5F-1-201ENST00000362507 117 ntBASIC0.2□□□□□ -2.38
SHC1P29353 RNA5SP173-201ENST00000364857 136 ntBASIC0.2□□□□□ -2.38
SHC1P29353 RNU6-382P-201ENST00000365181 106 ntBASIC0.2□□□□□ -2.38
SHC1P29353 Y_RNA.407-201ENST00000383986 113 ntBASIC0.2□□□□□ -2.38
SHC1P29353 MIR516B1-201ENST00000385211 90 ntBASIC0.2□□□□□ -2.38
SHC1P29353 RNU6-127P-201ENST00000390897 107 ntBASIC0.2□□□□□ -2.38
SHC1P29353 SNORA26.2-201ENST00000390922 122 ntBASIC0.2□□□□□ -2.38
SHC1P29353 U7.6-201ENST00000610841 64 ntBASIC0.2□□□□□ -2.38
SHC1P29353 MIR330-201ENST00000362196 94 ntBASIC0.19□□□□□ -2.38
SHC1P29353 RNU6-208P-201ENST00000362431 107 ntBASIC0.19□□□□□ -2.38
SHC1P29353 Y_RNA.371-201ENST00000365591 113 ntBASIC0.19□□□□□ -2.38
SHC1P29353 SNORD77.2-201ENST00000391045 68 ntBASIC0.19□□□□□ -2.38
SHC1P29353 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.19□□□□□ -2.38
SHC1P29353 Y_RNA.316-201ENST00000365118 111 ntBASIC0.18□□□□□ -2.38
SHC1P29353 MIR643-201ENST00000385267 97 ntBASIC0.18□□□□□ -2.38
SHC1P29353 RNU7-24P-201ENST00000458867 62 ntBASIC0.18□□□□□ -2.38
SHC1P29353 RNU6-557P-201ENST00000516842 110 ntBASIC0.18□□□□□ -2.38
SHC1P29353 MIR4666B-201ENST00000578142 81 ntBASIC0.18□□□□□ -2.38
SHC1P29353 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
SHC1P29353 RNU6-340P-201ENST00000364005 107 ntBASIC0.17□□□□□ -2.38
SHC1P29353 Y_RNA.313-201ENST00000365095 103 ntBASIC0.17□□□□□ -2.38
SHC1P29353 RNU6-652P-201ENST00000365488 107 ntBASIC0.17□□□□□ -2.38
SHC1P29353 RNU6-154P-201ENST00000384306 106 ntBASIC0.17□□□□□ -2.38
SHC1P29353 RNU6-242P-201ENST00000384359 107 ntBASIC0.17□□□□□ -2.38
SHC1P29353 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
SHC1P29353 RNU6-129P-201ENST00000391022 107 ntBASIC0.17□□□□□ -2.38
SHC1P29353 SNORD75.2-201ENST00000408784 58 ntBASIC0.17□□□□□ -2.38
SHC1P29353 MIR548H2-201ENST00000408874 88 ntBASIC0.17□□□□□ -2.38
SHC1P29353 Y_RNA.606-201ENST00000410579 103 ntBASIC0.17□□□□□ -2.38
SHC1P29353 YWHAEP3-201ENST00000582767 121 ntBASIC0.17□□□□□ -2.38
SHC1P29353 U6.81-201ENST00000612550 106 ntBASIC0.17□□□□□ -2.38
SHC1P29353 MIR8087-201ENST00000612745 78 ntBASIC0.17□□□□□ -2.38
SHC1P29353 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
SHC1P29353 MIR4773-1-201ENST00000637203 78 ntBASIC0.17□□□□□ -2.38
SHC1P29353 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
SHC1P29353 Y_RNA.12-201ENST00000362393 112 ntBASIC0.16□□□□□ -2.38
SHC1P29353 MIR1302-4-201ENST00000408701 150 ntBASIC0.16□□□□□ -2.38
SHC1P29353 RNU6-782P-201ENST00000516852 104 ntBASIC0.16□□□□□ -2.38
SHC1P29353 RNU7-188P-201ENST00000517063 64 ntBASIC0.16□□□□□ -2.38
SHC1P29353 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
SHC1P29353 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
SHC1P29353 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.16□□□□□ -2.38
SHC1P29353 AC084368.1-201ENST00000620935 65 ntBASIC0.16□□□□□ -2.38
SHC1P29353 MIRLET7A1-201ENST00000362295 80 ntBASIC0.15□□□□□ -2.39
SHC1P29353 RNU6-686P-201ENST00000364839 107 ntBASIC0.15□□□□□ -2.39
SHC1P29353 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
SHC1P29353 SCARNA17.3-201ENST00000516381 125 ntBASIC0.15□□□□□ -2.39
SHC1P29353 SNORA62.5-201ENST00000516634 120 ntBASIC0.15□□□□□ -2.39
SHC1P29353 SCARNA11.2-201ENST00000517183 154 ntBASIC0.15□□□□□ -2.39
SHC1P29353 AC023932.2-201ENST00000603176 175 ntBASIC0.15□□□□□ -2.39
SHC1P29353 RN7SL660P-201ENST00000614852 299 ntBASIC0.15□□□□□ -2.39
SHC1P29353 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
SHC1P29353 Y_RNA.219-201ENST00000364232 113 ntBASIC0.14□□□□□ -2.39
SHC1P29353 RNU6-990P-201ENST00000364385 104 ntBASIC0.14□□□□□ -2.39
SHC1P29353 Y_RNA.264-201ENST00000364665 102 ntBASIC0.14□□□□□ -2.39
SHC1P29353 MIR582-201ENST00000365731 98 ntBASIC0.14□□□□□ -2.39
SHC1P29353 Y_RNA.532-201ENST00000384590 113 ntBASIC0.14□□□□□ -2.39
SHC1P29353 MIR876-201ENST00000401147 81 ntBASIC0.14□□□□□ -2.39
SHC1P29353 MIR1197-201ENST00000408818 88 ntBASIC0.14□□□□□ -2.39
SHC1P29353 Y_RNA.660-201ENST00000516002 120 ntBASIC0.14□□□□□ -2.39
SHC1P29353 RNU6-175P-201ENST00000516896 107 ntBASIC0.14□□□□□ -2.39
SHC1P29353 SNORA40.17-201ENST00000517256 115 ntBASIC0.14□□□□□ -2.39
SHC1P29353 MIR1245B-201ENST00000636115 69 ntBASIC0.14□□□□□ -2.39
SHC1P29353 Y_RNA.94-201ENST00000363068 106 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms